RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 NOL8Q76FK4 1167 aaKnown RBP9.56□□□□□ -0.88
NPHP3-211ENST00000515289 JAZF1Q86VZ6 243 aa9.56□□□□□ -0.88
NPHP3-211ENST00000515289 MICAL1Q8TDZ2 1067 aa9.56□□□□□ -0.88
NPHP3-211ENST00000515289 KCNB2Q92953 911 aa9.56□□□□□ -0.88
NPHP3-211ENST00000515289 A6NJY4 79 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 ZPR1O75312 459 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 PDGFAP04085 211 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 SH3BP2P78314 561 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 DNM1Q05193 864 aaKnown RBP9.55□□□□□ -0.88
NPHP3-211ENST00000515289 BRINP2Q9C0B6 783 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 DNAJC25Q9H1X3 360 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 CHMP3Q9Y3E7 222 aa9.55□□□□□ -0.88
NPHP3-211ENST00000515289 NEFLP07196 543 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 HSD3B2P26439 372 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 IGBP1P78318 339 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 BMS1Q14692 1282 aaKnown RBP9.54□□□□□ -0.88
NPHP3-211ENST00000515289 ESCO1Q5FWF5 840 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 TBCELQ5QJ74 424 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 EDEM1Q92611 657 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.54□□□□□ -0.88
NPHP3-211ENST00000515289 SLC6A16Q9GZN6 736 aa9.54□□□□□ -0.88
NPHP3-211ENST00000515289 hCG_2014768A0A024R1R8 64 aa9.53□□□□□ -0.88
NPHP3-211ENST00000515289 EIF1AYO14602 144 aaKnown RBP9.53□□□□□ -0.88
NPHP3-211ENST00000515289 CLSTN1O94985 981 aa9.53□□□□□ -0.88
NPHP3-211ENST00000515289 ATF4P18848 351 aaPredicted RBP9.53□□□□□ -0.88
NPHP3-211ENST00000515289 SMTNP53814 917 aa9.53□□□□□ -0.88
NPHP3-211ENST00000515289 METTL14Q9HCE5 456 aaKnown RBP9.53□□□□□ -0.88
NPHP3-211ENST00000515289 GGT7Q9UJ14 662 aa9.53□□□□□ -0.88
NPHP3-211ENST00000515289 USP31Q70CQ4 1352 aa9.52□□□□□ -0.88
NPHP3-211ENST00000515289 GNRH1P01148 92 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 HIRAP54198 1017 aaPredicted RBP9.52□□□□□ -0.89
NPHP3-211ENST00000515289 ORC1Q13415 861 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 WRNQ14191 1432 aaPredicted RBP eCLIP9.52□□□□□ -0.89
NPHP3-211ENST00000515289 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 VASH1Q7L8A9 365 aaPredicted RBP9.52□□□□□ -0.89
NPHP3-211ENST00000515289 CYP2U1Q7Z449 544 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 ETFBKMTQ8IXQ9 262 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 MRFAP1L1Q96HT8 127 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 WBP1LQ9NX94 342 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 CFTRP13569 1480 aa9.52□□□□□ -0.89
NPHP3-211ENST00000515289 ARID4BQ4LE39 1312 aaPredicted RBP9.52□□□□□ -0.89
NPHP3-211ENST00000515289 GIPC1O14908 333 aa9.51□□□□□ -0.89
NPHP3-211ENST00000515289 XRCC5P13010 732 aaKnown RBP9.51□□□□□ -0.89
NPHP3-211ENST00000515289 PCSK2P16519 638 aa9.51□□□□□ -0.89
NPHP3-211ENST00000515289 IBSPP21815 317 aaPredicted RBP9.51□□□□□ -0.89
NPHP3-211ENST00000515289 ZAP70P43403 619 aa9.51□□□□□ -0.89
NPHP3-211ENST00000515289 WNT2BQ93097 391 aa9.51□□□□□ -0.89
NPHP3-211ENST00000515289 DMGDHQ9UI17 866 aaKnown RBP9.51□□□□□ -0.89
NPHP3-211ENST00000515289 SYNJ1O43426 1573 aa9.5□□□□□ -0.89
NPHP3-211ENST00000515289 ST13P50502 369 aaKnown RBP9.5□□□□□ -0.89
NPHP3-211ENST00000515289 C11orf91Q3C1V1 193 aa9.5□□□□□ -0.89
NPHP3-211ENST00000515289 CKAP2LQ8IYA6 745 aa9.5□□□□□ -0.89
NPHP3-211ENST00000515289 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
NPHP3-211ENST00000515289 GPRASP2Q96D09 838 aa9.5□□□□□ -0.89
NPHP3-211ENST00000515289 STAC3Q96MF2 364 aa9.5□□□□□ -0.89
NPHP3-211ENST00000515289 C12orf49Q9H741 205 aa9.5□□□□□ -0.89
NPHP3-211ENST00000515289 MRPL42Q9Y6G3 142 aaKnown RBP9.5□□□□□ -0.89
NPHP3-211ENST00000515289 CDK2AP1O14519 115 aa9.49□□□□□ -0.89
NPHP3-211ENST00000515289 OPLAHO14841 1288 aa9.49□□□□□ -0.89
NPHP3-211ENST00000515289 VARSP26640 1264 aaKnown RBP9.49□□□□□ -0.89
NPHP3-211ENST00000515289 DHX9Q08211 1270 aaKnown RBP9.49□□□□□ -0.89
NPHP3-211ENST00000515289 PAK2Q13177 524 aa9.49□□□□□ -0.89
NPHP3-211ENST00000515289 RTN1Q16799 776 aa9.49□□□□□ -0.89
NPHP3-211ENST00000515289 RNF187Q5TA31 235 aaPredicted RBP9.49□□□□□ -0.89
NPHP3-211ENST00000515289 CPNE3O75131 537 aaKnown RBP9.48□□□□□ -0.89
NPHP3-211ENST00000515289 LSM11P83369 360 aaKnown RBP eCLIP9.48□□□□□ -0.89
NPHP3-211ENST00000515289 SERINC3Q13530 473 aa9.48□□□□□ -0.89
NPHP3-211ENST00000515289 TAF1CQ15572 869 aaPredicted RBP9.48□□□□□ -0.89
NPHP3-211ENST00000515289 RASGRP4Q8TDF6 673 aa9.48□□□□□ -0.89
NPHP3-211ENST00000515289 MKL1Q969V6 931 aa9.48□□□□□ -0.89
NPHP3-211ENST00000515289 NOP58Q9Y2X3 529 aaKnown RBP9.48□□□□□ -0.89
NPHP3-211ENST00000515289 FCF1Q9Y324 198 aaKnown RBP9.48□□□□□ -0.89
NPHP3-211ENST00000515289 SERTM1A2A2V5 107 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
NPHP3-211ENST00000515289 EML1O00423 815 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 ENPP3O14638 875 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 RPLP1P05386 114 aaKnown RBP9.47□□□□□ -0.89
NPHP3-211ENST00000515289 DGKZQ13574 1117 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.47□□□□□ -0.89
NPHP3-211ENST00000515289 ERMP1Q7Z2K6 904 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 NBPF15Q8N660 670 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 NGLY1Q96IV0 654 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 TMPRSS4Q9NRS4 437 aa9.47□□□□□ -0.89
NPHP3-211ENST00000515289 WNT7BP56706 349 aa9.46□□□□□ -0.9
NPHP3-211ENST00000515289 ANAPC15P60006 121 aa9.46□□□□□ -0.9
NPHP3-211ENST00000515289 TEAD4Q15561 434 aa9.46□□□□□ -0.9
NPHP3-211ENST00000515289 ALDH16A1Q8IZ83 802 aa9.46□□□□□ -0.9
NPHP3-211ENST00000515289 FAM9AQ8IZU1 332 aaPredicted RBP9.46□□□□□ -0.9
NPHP3-211ENST00000515289 ZNF784Q8NCA9 323 aaPredicted RBP9.46□□□□□ -0.9
NPHP3-211ENST00000515289 IFT43Q96FT9 208 aa9.46□□□□□ -0.9
NPHP3-211ENST00000515289 EMP3P54852 163 aa9.45□□□□□ -0.9
NPHP3-211ENST00000515289 NUDT16Q96DE0 195 aaKnown RBP9.45□□□□□ -0.9
NPHP3-211ENST00000515289 XAGE2Q96GT9 111 aa9.45□□□□□ -0.9
NPHP3-211ENST00000515289 SEC16BQ96JE7 1060 aa9.45□□□□□ -0.9
NPHP3-211ENST00000515289 OSBPL7Q9BZF2 842 aa9.45□□□□□ -0.9
NPHP3-211ENST00000515289 FAM8A1Q9UBU6 413 aa9.45□□□□□ -0.9
NPHP3-211ENST00000515289 USP3Q9Y6I4 520 aa9.45□□□□□ -0.9
NPHP3-211ENST00000515289 V9GY48 417 aaPredicted RBP9.45□□□□□ -0.9
NPHP3-211ENST00000515289 SOGA1O94964 1423 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms