RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 PLSCR1O15162 318 aa12.73□□□□□ -0.37
SNF8-214ENST00000515174 PI4KAP1Q8N8J0 262 aa12.73□□□□□ -0.37
SNF8-214ENST00000515174 NECTIN2Q92692 538 aa12.73□□□□□ -0.37
SNF8-214ENST00000515174 C1orf115Q9H7X2 142 aa12.73□□□□□ -0.37
SNF8-214ENST00000515174 STK32BQ9NY57 414 aa12.73□□□□□ -0.37
SNF8-214ENST00000515174 ADCY9O60503 1353 aa12.72□□□□□ -0.37
SNF8-214ENST00000515174 TAF1LQ8IZX4 1826 aa12.72□□□□□ -0.37
SNF8-214ENST00000515174 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
SNF8-214ENST00000515174 ANKRD45Q5TZF3 282 aa12.72□□□□□ -0.37
SNF8-214ENST00000515174 LRP10Q7Z4F1 713 aa12.72□□□□□ -0.37
SNF8-214ENST00000515174 PDGFDQ9GZP0 370 aaPredicted RBP12.72□□□□□ -0.37
SNF8-214ENST00000515174 ZNF831Q5JPB2 1677 aa12.71□□□□□ -0.37
SNF8-214ENST00000515174 UTYO14607 1347 aa12.71□□□□□ -0.37
SNF8-214ENST00000515174 EXOC5O00471 708 aa12.71□□□□□ -0.37
SNF8-214ENST00000515174 EIF5BO60841 1220 aaKnown RBP12.71□□□□□ -0.37
SNF8-214ENST00000515174 MTX1Q13505 466 aa12.71□□□□□ -0.37
SNF8-214ENST00000515174 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.37
SNF8-214ENST00000515174 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
SNF8-214ENST00000515174 MARCH10Q8NA82 808 aaPredicted RBP12.71□□□□□ -0.37
SNF8-214ENST00000515174 LINS1Q8NG48 757 aa12.71□□□□□ -0.37
SNF8-214ENST00000515174 UBTFL1P0CB47 393 aaPredicted RBP12.7□□□□□ -0.38
SNF8-214ENST00000515174 SSH3Q8TE77 659 aa12.7□□□□□ -0.38
SNF8-214ENST00000515174 IPO9Q96P70 1041 aaKnown RBP12.7□□□□□ -0.38
SNF8-214ENST00000515174 TEX13AQ9BXU3 409 aaPredicted RBP12.7□□□□□ -0.38
SNF8-214ENST00000515174 BCL9O00512 1426 aa12.7□□□□□ -0.38
SNF8-214ENST00000515174 ARFGEF2Q9Y6D5 1785 aa12.69□□□□□ -0.38
SNF8-214ENST00000515174 PRAMEF22A3QJZ6 481 aa12.69□□□□□ -0.38
SNF8-214ENST00000515174 POLA2Q14181 598 aa12.69□□□□□ -0.38
SNF8-214ENST00000515174 PROSER3Q2NL68 480 aa12.69□□□□□ -0.38
SNF8-214ENST00000515174 PTF1AQ7RTS3 328 aa12.69□□□□□ -0.38
SNF8-214ENST00000515174 SYT17Q9BSW7 474 aa12.69□□□□□ -0.38
SNF8-214ENST00000515174 FHDC1Q9C0D6 1143 aaPredicted RBP12.69□□□□□ -0.38
SNF8-214ENST00000515174 LNPKQ9C0E8 428 aa12.69□□□□□ -0.38
SNF8-214ENST00000515174 USP16Q9Y5T5 823 aa12.69□□□□□ -0.38
SNF8-214ENST00000515174 PTGER2P43116 358 aa12.68□□□□□ -0.38
SNF8-214ENST00000515174 C1QTNF8P60827 252 aa12.68□□□□□ -0.38
SNF8-214ENST00000515174 OSBPL3Q9H4L5 887 aa12.68□□□□□ -0.38
SNF8-214ENST00000515174 ZBTB47Q9UFB7 747 aaPredicted RBP12.68□□□□□ -0.38
SNF8-214ENST00000515174 MAP3K2Q9Y2U5 619 aa12.68□□□□□ -0.38
SNF8-214ENST00000515174 COL15A1P39059 1388 aa12.68□□□□□ -0.38
SNF8-214ENST00000515174 AFDNP55196 1824 aaKnown RBP12.67□□□□□ -0.38
SNF8-214ENST00000515174 RGPD3A6NKT7 1758 aaPredicted RBP12.67□□□□□ -0.38
SNF8-214ENST00000515174 RGPD4Q7Z3J3 1758 aa12.67□□□□□ -0.38
SNF8-214ENST00000515174 RAB11FIP3O75154 756 aa12.67□□□□□ -0.38
SNF8-214ENST00000515174 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
SNF8-214ENST00000515174 PLEKHM2Q8IWE5 1019 aa12.67□□□□□ -0.38
SNF8-214ENST00000515174 DDRGK1Q96HY6 314 aa12.67□□□□□ -0.38
SNF8-214ENST00000515174 METTL22Q9BUU2 404 aaPredicted RBP12.67□□□□□ -0.38
SNF8-214ENST00000515174 LRRFIP2Q9Y608 721 aaKnown RBP12.67□□□□□ -0.38
SNF8-214ENST00000515174 ANXA1P04083 346 aa12.66□□□□□ -0.38
SNF8-214ENST00000515174 SLC15A2Q16348 729 aa12.66□□□□□ -0.38
SNF8-214ENST00000515174 TXNRD1Q16881 649 aa12.66□□□□□ -0.38
SNF8-214ENST00000515174 HSP90AB4PQ58FF6 505 aa12.66□□□□□ -0.38
SNF8-214ENST00000515174 COPS6Q7L5N1 327 aa12.66□□□□□ -0.38
SNF8-214ENST00000515174 PROM2Q8N271 834 aa12.66□□□□□ -0.38
SNF8-214ENST00000515174 ACSBG1Q96GR2 724 aa12.66□□□□□ -0.38
SNF8-214ENST00000515174 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
SNF8-214ENST00000515174 TMOD3Q9NYL9 352 aa12.66□□□□□ -0.38
SNF8-214ENST00000515174 NOP58Q9Y2X3 529 aaKnown RBP12.66□□□□□ -0.38
SNF8-214ENST00000515174 TUBGCP6Q96RT7 1819 aa12.66□□□□□ -0.38
SNF8-214ENST00000515174 ANKRD36CQ5JPF3 1778 aa12.66□□□□□ -0.38
SNF8-214ENST00000515174 NEXNQ0ZGT2 675 aa12.65□□□□□ -0.38
SNF8-214ENST00000515174 GPR162Q16538 588 aa12.65□□□□□ -0.38
SNF8-214ENST00000515174 RIC3Q7Z5B4 369 aa12.65□□□□□ -0.38
SNF8-214ENST00000515174 KLHL34Q8N239 644 aa12.65□□□□□ -0.38
SNF8-214ENST00000515174 PLBD2Q8NHP8 589 aa12.65□□□□□ -0.38
SNF8-214ENST00000515174 XAGE3Q8WTP9 111 aa12.65□□□□□ -0.38
SNF8-214ENST00000515174 BCORQ6W2J9 1755 aa12.65□□□□□ -0.38
SNF8-214ENST00000515174 MYH14Q7Z406 1995 aaKnown RBP12.65□□□□□ -0.38
SNF8-214ENST00000515174 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
SNF8-214ENST00000515174 PNMA6EA0A0J9YXQ4 647 aa12.64□□□□□ -0.39
SNF8-214ENST00000515174 GRM8O00222 908 aa12.64□□□□□ -0.39
SNF8-214ENST00000515174 NBPF7P0C2Y1 421 aaPredicted RBP12.64□□□□□ -0.39
SNF8-214ENST00000515174 SYTL4Q96C24 671 aaPredicted RBP12.64□□□□□ -0.39
SNF8-214ENST00000515174 ARXQ96QS3 562 aa12.64□□□□□ -0.39
SNF8-214ENST00000515174 UPF2Q9HAU5 1272 aaKnown RBP12.64□□□□□ -0.39
SNF8-214ENST00000515174 C4AP0C0L4 1744 aa12.64□□□□□ -0.39
SNF8-214ENST00000515174 C4BP0C0L5 1744 aa12.64□□□□□ -0.39
SNF8-214ENST00000515174 NEURL1BA8MQ27 555 aa12.63□□□□□ -0.39
SNF8-214ENST00000515174 MSH5O43196 834 aa12.63□□□□□ -0.39
SNF8-214ENST00000515174 IGKV5-2P06315 115 aa12.63□□□□□ -0.39
SNF8-214ENST00000515174 PPP1R42Q7Z4L9 355 aa12.63□□□□□ -0.39
SNF8-214ENST00000515174 PIGBQ92521 554 aa12.63□□□□□ -0.39
SNF8-214ENST00000515174 LRRCC1Q9C099 1032 aa12.63□□□□□ -0.39
SNF8-214ENST00000515174 C9orf78Q9NZ63 289 aaPredicted RBP12.63□□□□□ -0.39
SNF8-214ENST00000515174 STAP2Q9UGK3 403 aa12.63□□□□□ -0.39
SNF8-214ENST00000515174 SALL3Q9BXA9 1300 aa12.62□□□□□ -0.39
SNF8-214ENST00000515174 SCN7AQ01118 1682 aa12.62□□□□□ -0.39
SNF8-214ENST00000515174 NBPF26B4DH59 902 aa12.62□□□□□ -0.39
SNF8-214ENST00000515174 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
SNF8-214ENST00000515174 GCKRQ14397 625 aa12.62□□□□□ -0.39
SNF8-214ENST00000515174 TTC22Q5TAA0 569 aa12.62□□□□□ -0.39
SNF8-214ENST00000515174 NBPF10Q6P3W6 841 aaKnown RBP12.62□□□□□ -0.39
SNF8-214ENST00000515174 NBPF15Q8N660 670 aa12.62□□□□□ -0.39
SNF8-214ENST00000515174 TBC1D32Q96NH3 1257 aa12.62□□□□□ -0.39
SNF8-214ENST00000515174 ATG3Q9NT62 314 aa12.62□□□□□ -0.39
SNF8-214ENST00000515174 AOX1Q06278 1338 aa12.62□□□□□ -0.39
SNF8-214ENST00000515174 SEC24BO95487 1268 aa12.61□□□□□ -0.39
SNF8-214ENST00000515174 MYL6BP14649 208 aa12.61□□□□□ -0.39
SNF8-214ENST00000515174 TRIM28Q13263 835 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms