RNA–Protein interactions for RNA: ENST00000514233.1

SDHA-217, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-217ENST00000514233 KLRG2A4D1S0 409 aaPredicted RBP12.04□□□□□ -0.48
SDHA-217ENST00000514233 PRKAR2BP31323 418 aa12.04□□□□□ -0.48
SDHA-217ENST00000514233 COL13A1Q5TAT6 717 aaPredicted RBP12.04□□□□□ -0.48
SDHA-217ENST00000514233 PRPF40BQ6NWY9 871 aaKnown RBP12.04□□□□□ -0.48
SDHA-217ENST00000514233 DZIP3Q86Y13 1208 aaKnown RBP12.04□□□□□ -0.48
SDHA-217ENST00000514233 MASTLQ96GX5 879 aa12.04□□□□□ -0.48
SDHA-217ENST00000514233 CFAP53Q96M91 514 aa12.04□□□□□ -0.48
SDHA-217ENST00000514233 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
SDHA-217ENST00000514233 ARFGEF2Q9Y6D5 1785 aa12.03□□□□□ -0.48
SDHA-217ENST00000514233 KCNQ3O43525 872 aa12.03□□□□□ -0.48
SDHA-217ENST00000514233 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
SDHA-217ENST00000514233 C7orf43Q8WVR3 580 aa12.03□□□□□ -0.48
SDHA-217ENST00000514233 NUDCQ9Y266 331 aa12.03□□□□□ -0.48
SDHA-217ENST00000514233 ZNF652Q9Y2D9 606 aa12.03□□□□□ -0.48
SDHA-217ENST00000514233 USP16Q9Y5T5 823 aa12.03□□□□□ -0.48
SDHA-217ENST00000514233 LAMB4A4D0S4 1761 aa12.02□□□□□ -0.48
SDHA-217ENST00000514233 SLX4Q8IY92 1834 aa12.02□□□□□ -0.48
SDHA-217ENST00000514233 HTATSF1O43719 755 aaKnown RBP12.02□□□□□ -0.49
SDHA-217ENST00000514233 CCDC24Q8N4L8 307 aa12.02□□□□□ -0.49
SDHA-217ENST00000514233 NPHP1O15259 732 aa12.01□□□□□ -0.49
SDHA-217ENST00000514233 CHADLQ6NUI6 762 aa12.01□□□□□ -0.49
SDHA-217ENST00000514233 NBPF5PQ86XG9 351 aaPredicted RBP12.01□□□□□ -0.49
SDHA-217ENST00000514233 L3MBTL3Q96JM7 780 aaPredicted RBP12.01□□□□□ -0.49
SDHA-217ENST00000514233 CREBZFQ9NS37 354 aa12.01□□□□□ -0.49
SDHA-217ENST00000514233 IQCA1LA6NCM1 817 aa12□□□□□ -0.49
SDHA-217ENST00000514233 NPR1P16066 1061 aa12□□□□□ -0.49
SDHA-217ENST00000514233 CCDC93Q567U6 631 aa12□□□□□ -0.49
SDHA-217ENST00000514233 TPTE2Q6XPS3 522 aa12□□□□□ -0.49
SDHA-217ENST00000514233 RTF1Q92541 710 aaKnown RBP12□□□□□ -0.49
SDHA-217ENST00000514233 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
SDHA-217ENST00000514233 KDM3BQ7LBC6 1761 aa12□□□□□ -0.49
SDHA-217ENST00000514233 PRAMEF22A3QJZ6 481 aa11.99□□□□□ -0.49
SDHA-217ENST00000514233 NBPF26B4DH59 902 aa11.99□□□□□ -0.49
SDHA-217ENST00000514233 DDNO94850 711 aaPredicted RBP11.99□□□□□ -0.49
SDHA-217ENST00000514233 HSPA1AP0DMV8 641 aaKnown RBP11.99□□□□□ -0.49
SDHA-217ENST00000514233 HSPA1BP0DMV9 641 aaKnown RBP11.99□□□□□ -0.49
SDHA-217ENST00000514233 U2AF1L5P0DN76 240 aaPredicted RBP11.99□□□□□ -0.49
SDHA-217ENST00000514233 U2AF1Q01081 240 aaKnown RBP eCLIP11.99□□□□□ -0.49
SDHA-217ENST00000514233 NBPF10Q6P3W6 841 aaKnown RBP11.99□□□□□ -0.49
SDHA-217ENST00000514233 MCM10Q7L590 875 aa11.99□□□□□ -0.49
SDHA-217ENST00000514233 TNS4Q8IZW8 715 aa11.99□□□□□ -0.49
SDHA-217ENST00000514233 NBPF15Q8N660 670 aa11.99□□□□□ -0.49
SDHA-217ENST00000514233 SCN4AP35499 1836 aa11.98□□□□□ -0.49
SDHA-217ENST00000514233 PASKQ96RG2 1323 aa11.98□□□□□ -0.49
SDHA-217ENST00000514233 PPP2R1AP30153 589 aa11.98□□□□□ -0.49
SDHA-217ENST00000514233 PIP4K2AP48426 406 aaPredicted RBP11.98□□□□□ -0.49
SDHA-217ENST00000514233 FKBP4Q02790 459 aaKnown RBP eCLIP11.98□□□□□ -0.49
SDHA-217ENST00000514233 LDHDQ86WU2 507 aa11.98□□□□□ -0.49
SDHA-217ENST00000514233 RTKN2Q8IZC4 609 aa11.98□□□□□ -0.49
SDHA-217ENST00000514233 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
SDHA-217ENST00000514233 POTEJP0CG39 1038 aa11.97□□□□□ -0.49
SDHA-217ENST00000514233 TAF7Q15545 349 aaPredicted RBP11.97□□□□□ -0.49
SDHA-217ENST00000514233 TAF1DQ9H5J8 278 aaPredicted RBP11.97□□□□□ -0.49
SDHA-217ENST00000514233 NIP7Q9Y221 180 aaKnown RBP eCLIP11.97□□□□□ -0.49
SDHA-217ENST00000514233 ALDH1B1P30837 517 aa11.96□□□□□ -0.49
SDHA-217ENST00000514233 SNED1Q8TER0 1413 aa11.95□□□□□ -0.5
SDHA-217ENST00000514233 ERVV-1B6SEH8 477 aa11.95□□□□□ -0.5
SDHA-217ENST00000514233 DCTN1Q14203 1278 aa11.95□□□□□ -0.5
SDHA-217ENST00000514233 CRY2Q49AN0 593 aa11.95□□□□□ -0.5
SDHA-217ENST00000514233 PNISRQ8TF01 805 aaKnown RBP11.95□□□□□ -0.5
SDHA-217ENST00000514233 ZNF277Q9NRM2 450 aaPredicted RBP11.95□□□□□ -0.5
SDHA-217ENST00000514233 RIC1Q4ADV7 1423 aa11.94□□□□□ -0.5
SDHA-217ENST00000514233 CNTNAP1P78357 1384 aa11.94□□□□□ -0.5
SDHA-217ENST00000514233 IBTKQ9P2D0 1353 aaPredicted RBP11.94□□□□□ -0.5
SDHA-217ENST00000514233 FZD9O00144 591 aa11.94□□□□□ -0.5
SDHA-217ENST00000514233 ITGBL1O95965 494 aaPredicted RBP11.94□□□□□ -0.5
SDHA-217ENST00000514233 HLFQ16534 295 aa11.94□□□□□ -0.5
SDHA-217ENST00000514233 PSMD1Q99460 953 aa11.94□□□□□ -0.5
SDHA-217ENST00000514233 NYXQ9GZU5 481 aa11.94□□□□□ -0.5
SDHA-217ENST00000514233 ZNF541Q9H0D2 1346 aa11.93□□□□□ -0.5
SDHA-217ENST00000514233 ADAMTSL1Q8N6G6 1762 aa11.93□□□□□ -0.5
SDHA-217ENST00000514233 IARSP41252 1262 aaKnown RBP11.93□□□□□ -0.5
SDHA-217ENST00000514233 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
SDHA-217ENST00000514233 CC2D2BQ6DHV5 1058 aa11.93□□□□□ -0.5
SDHA-217ENST00000514233 PNMA8AQ86V59 439 aaPredicted RBP11.93□□□□□ -0.5
SDHA-217ENST00000514233 GPC2Q8N158 579 aa11.93□□□□□ -0.5
SDHA-217ENST00000514233 MKRN1Q9UHC7 482 aaKnown RBP11.93□□□□□ -0.5
SDHA-217ENST00000514233 HACL1Q9UJ83 578 aa11.93□□□□□ -0.5
SDHA-217ENST00000514233 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
SDHA-217ENST00000514233 GTF2E1P29083 439 aaPredicted RBP11.92□□□□□ -0.5
SDHA-217ENST00000514233 HOXA10P31260 410 aaPredicted RBP11.92□□□□□ -0.5
SDHA-217ENST00000514233 OLFM4Q6UX06 510 aa11.92□□□□□ -0.5
SDHA-217ENST00000514233 SYNE4Q8N205 404 aa11.92□□□□□ -0.5
SDHA-217ENST00000514233 NUP98P52948 1817 aa11.92□□□□□ -0.5
SDHA-217ENST00000514233 ABCC12Q96J65 1359 aa11.92□□□□□ -0.5
SDHA-217ENST00000514233 MAP3K15Q6ZN16 1313 aa11.91□□□□□ -0.5
SDHA-217ENST00000514233 NEFMP07197 916 aa11.91□□□□□ -0.5
SDHA-217ENST00000514233 EPHX2P34913 555 aa11.91□□□□□ -0.5
SDHA-217ENST00000514233 EIF4A1P60842 406 aaKnown RBP11.91□□□□□ -0.5
SDHA-217ENST00000514233 MIS18AQ9NYP9 233 aa11.91□□□□□ -0.5
SDHA-217ENST00000514233 ERBB4Q15303 1308 aa11.9□□□□□ -0.5
SDHA-217ENST00000514233 FAM177BA6PVY3 158 aa11.9□□□□□ -0.5
SDHA-217ENST00000514233 CAPN15O75808 1086 aa11.9□□□□□ -0.5
SDHA-217ENST00000514233 KIF6Q6ZMV9 814 aa11.9□□□□□ -0.5
SDHA-217ENST00000514233 JDP2Q8WYK2 163 aa11.9□□□□□ -0.5
SDHA-217ENST00000514233 PLEKHF1Q96S99 279 aa11.9□□□□□ -0.5
SDHA-217ENST00000514233 PRDM10Q9NQV6 1147 aa11.9□□□□□ -0.5
SDHA-217ENST00000514233 RNF123Q5XPI4 1314 aa11.89□□□□□ -0.51
SDHA-217ENST00000514233 RASSF10A6NK89 507 aa11.89□□□□□ -0.51
SDHA-217ENST00000514233 VEGFBP49765 207 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms