RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 PSME1Q06323 249 aa9.56□□□□□ -0.88
SRPK1-213ENST00000513367 SCARF1Q14162 830 aa9.56□□□□□ -0.88
SRPK1-213ENST00000513367 NUDT12Q9BQG2 462 aa9.56□□□□□ -0.88
SRPK1-213ENST00000513367 TSHZ2Q9NRE2 1034 aa9.56□□□□□ -0.88
SRPK1-213ENST00000513367 SHANK3Q9BYB0 1731 aa9.56□□□□□ -0.88
SRPK1-213ENST00000513367 TIMP2P16035 220 aa9.55□□□□□ -0.88
SRPK1-213ENST00000513367 GPR162Q16538 588 aa9.55□□□□□ -0.88
SRPK1-213ENST00000513367 ADAMTS8Q9UP79 889 aa9.55□□□□□ -0.88
SRPK1-213ENST00000513367 PPFIA3O75145 1194 aa9.54□□□□□ -0.88
SRPK1-213ENST00000513367 HSPA6P17066 643 aa9.54□□□□□ -0.88
SRPK1-213ENST00000513367 KRT76Q01546 638 aa9.54□□□□□ -0.88
SRPK1-213ENST00000513367 PDE3BQ13370 1112 aa9.54□□□□□ -0.88
SRPK1-213ENST00000513367 NNTQ13423 1086 aa9.54□□□□□ -0.88
SRPK1-213ENST00000513367 AMER1Q5JTC6 1135 aaPredicted RBP9.54□□□□□ -0.88
SRPK1-213ENST00000513367 WAPLQ7Z5K2 1190 aa9.54□□□□□ -0.88
SRPK1-213ENST00000513367 DLC1Q96QB1 1528 aa9.54□□□□□ -0.88
SRPK1-213ENST00000513367 PRAG1Q86YV5 1406 aa9.54□□□□□ -0.88
SRPK1-213ENST00000513367 FMN2Q9NZ56 1722 aa9.53□□□□□ -0.88
SRPK1-213ENST00000513367 SPATA31A1Q5TZJ5 1347 aa9.53□□□□□ -0.88
SRPK1-213ENST00000513367 SBNO1A3KN83 1393 aa9.52□□□□□ -0.88
SRPK1-213ENST00000513367 ARHGEF10O15013 1369 aa9.52□□□□□ -0.88
SRPK1-213ENST00000513367 HOXA2O43364 376 aa9.52□□□□□ -0.89
SRPK1-213ENST00000513367 WDR4P57081 412 aaKnown RBP9.52□□□□□ -0.89
SRPK1-213ENST00000513367 LINC01559Q495D7 138 aa9.52□□□□□ -0.89
SRPK1-213ENST00000513367 RTN4Q9NQC3 1192 aaKnown RBP9.52□□□□□ -0.89
SRPK1-213ENST00000513367 RRBP1Q9P2E9 1410 aaKnown RBP9.51□□□□□ -0.89
SRPK1-213ENST00000513367 XP32Q5T750 250 aa9.51□□□□□ -0.89
SRPK1-213ENST00000513367 KLF16Q9BXK1 252 aaPredicted RBP9.51□□□□□ -0.89
SRPK1-213ENST00000513367 STRN4Q9NRL3 753 aa9.51□□□□□ -0.89
SRPK1-213ENST00000513367 STK26Q9P289 416 aa9.51□□□□□ -0.89
SRPK1-213ENST00000513367 USP35Q9P2H5 1018 aa9.51□□□□□ -0.89
SRPK1-213ENST00000513367 KIF1BO60333 1816 aa9.5□□□□□ -0.89
SRPK1-213ENST00000513367 GPAT2Q6NUI2 795 aa9.5□□□□□ -0.89
SRPK1-213ENST00000513367 GPR161Q8N6U8 529 aaKnown RBP9.5□□□□□ -0.89
SRPK1-213ENST00000513367 NUP155O75694 1391 aa9.5□□□□□ -0.89
SRPK1-213ENST00000513367 CLTCL1P53675 1640 aa9.49□□□□□ -0.89
SRPK1-213ENST00000513367 TESPA1A2RU30 521 aaPredicted RBP9.49□□□□□ -0.89
SRPK1-213ENST00000513367 MAN1A2O60476 641 aa9.49□□□□□ -0.89
SRPK1-213ENST00000513367 USP46P62068 366 aa9.49□□□□□ -0.89
SRPK1-213ENST00000513367 COL13A1Q5TAT6 717 aaPredicted RBP9.49□□□□□ -0.89
SRPK1-213ENST00000513367 ARXQ96QS3 562 aa9.49□□□□□ -0.89
SRPK1-213ENST00000513367 PLEKHH1Q9ULM0 1364 aa9.49□□□□□ -0.89
SRPK1-213ENST00000513367 TECPR2O15040 1411 aa9.48□□□□□ -0.89
SRPK1-213ENST00000513367 PLSCR1O15162 318 aa9.48□□□□□ -0.89
SRPK1-213ENST00000513367 ADH1CP00326 375 aa9.48□□□□□ -0.89
SRPK1-213ENST00000513367 BAP1Q92560 729 aa9.48□□□□□ -0.89
SRPK1-213ENST00000513367 CNTNAP3BQ96NU0 1288 aa9.48□□□□□ -0.89
SRPK1-213ENST00000513367 CNTNAP3Q9BZ76 1288 aa9.48□□□□□ -0.89
SRPK1-213ENST00000513367 MTFR1LQ9H019 292 aa9.48□□□□□ -0.89
SRPK1-213ENST00000513367 PRDM11Q9NQV5 511 aa9.48□□□□□ -0.89
SRPK1-213ENST00000513367 IFT172Q9UG01 1749 aa9.48□□□□□ -0.89
SRPK1-213ENST00000513367 RGPD3A6NKT7 1758 aaPredicted RBP9.47□□□□□ -0.89
SRPK1-213ENST00000513367 RGPD4Q7Z3J3 1758 aa9.47□□□□□ -0.89
SRPK1-213ENST00000513367 SBF2Q86WG5 1849 aa9.47□□□□□ -0.89
SRPK1-213ENST00000513367 RNF225M0QZC1 329 aaPredicted RBP9.47□□□□□ -0.89
SRPK1-213ENST00000513367 PRELPP51888 382 aa9.47□□□□□ -0.89
SRPK1-213ENST00000513367 FAM50AQ14320 339 aaKnown RBP9.47□□□□□ -0.89
SRPK1-213ENST00000513367 CHRNA2Q15822 529 aa9.47□□□□□ -0.89
SRPK1-213ENST00000513367 C6orf118Q5T5N4 469 aa9.47□□□□□ -0.89
SRPK1-213ENST00000513367 PMFBP1Q8TBY8 1022 aa9.47□□□□□ -0.89
SRPK1-213ENST00000513367 VPS8Q8N3P4 1428 aa9.47□□□□□ -0.89
SRPK1-213ENST00000513367 NRXN1Q9ULB1 1477 aa9.47□□□□□ -0.89
SRPK1-213ENST00000513367 GOLGB1Q14789 3259 aaKnown RBP9.46□□□□□ -0.89
SRPK1-213ENST00000513367 BARGINQ6ZT62 677 aa9.46□□□□□ -0.9
SRPK1-213ENST00000513367 PTF1AQ7RTS3 328 aa9.46□□□□□ -0.9
SRPK1-213ENST00000513367 RETREG3Q86VR2 466 aa9.46□□□□□ -0.9
SRPK1-213ENST00000513367 UNC93B1Q9H1C4 597 aa9.46□□□□□ -0.9
SRPK1-213ENST00000513367 ZFAND3Q9H8U3 227 aa9.46□□□□□ -0.9
SRPK1-213ENST00000513367 STK32BQ9NY57 414 aa9.46□□□□□ -0.9
SRPK1-213ENST00000513367 ATP10DQ9P241 1426 aa9.46□□□□□ -0.9
SRPK1-213ENST00000513367 ALS2Q96Q42 1657 aa9.45□□□□□ -0.9
SRPK1-213ENST00000513367 TRPM3Q9HCF6 1732 aaPredicted RBP9.45□□□□□ -0.9
SRPK1-213ENST00000513367 PLEKHG3A1L390 1219 aa9.45□□□□□ -0.9
SRPK1-213ENST00000513367 CCNYL3P0C7X3 344 aa9.45□□□□□ -0.9
SRPK1-213ENST00000513367 SLC15A2Q16348 729 aa9.45□□□□□ -0.9
SRPK1-213ENST00000513367 TNS4Q8IZW8 715 aa9.45□□□□□ -0.9
SRPK1-213ENST00000513367 MPNDQ8N594 471 aa9.45□□□□□ -0.9
SRPK1-213ENST00000513367 GPBP1L1Q9HC44 474 aaPredicted RBP9.45□□□□□ -0.9
SRPK1-213ENST00000513367 MAP3K5Q99683 1374 aa9.45□□□□□ -0.9
SRPK1-213ENST00000513367 CRYBG1Q9Y4K1 1723 aa9.45□□□□□ -0.9
SRPK1-213ENST00000513367 IRS1P35568 1242 aa9.44□□□□□ -0.9
SRPK1-213ENST00000513367 EVA1CP58658 441 aa9.44□□□□□ -0.9
SRPK1-213ENST00000513367 ZNF526Q8TF50 670 aaPredicted RBP9.44□□□□□ -0.9
SRPK1-213ENST00000513367 PPLO60437 1756 aa9.43□□□□□ -0.9
SRPK1-213ENST00000513367 KIAA0232Q92628 1395 aa9.43□□□□□ -0.9
SRPK1-213ENST00000513367 MS4A1P11836 297 aa9.43□□□□□ -0.9
SRPK1-213ENST00000513367 ZNF385CQ66K41 422 aaPredicted RBP9.43□□□□□ -0.9
SRPK1-213ENST00000513367 TMEM132EQ6IEE7 984 aa9.43□□□□□ -0.9
SRPK1-213ENST00000513367 DNAJC5GQ8N7S2 189 aa9.43□□□□□ -0.9
SRPK1-213ENST00000513367 ZNF511Q8NB15 262 aa9.43□□□□□ -0.9
SRPK1-213ENST00000513367 DNMT3AQ9Y6K1 912 aaPredicted RBP9.43□□□□□ -0.9
SRPK1-213ENST00000513367 PEAK1Q9H792 1746 aa9.42□□□□□ -0.9
SRPK1-213ENST00000513367 VARSP26640 1264 aaKnown RBP9.42□□□□□ -0.9
SRPK1-213ENST00000513367 ZC3H6P61129 1189 aaKnown RBP9.42□□□□□ -0.9
SRPK1-213ENST00000513367 LARP1Q6PKG0 1096 aaKnown RBP9.42□□□□□ -0.9
SRPK1-213ENST00000513367 TCP11L2Q8N4U5 519 aa9.42□□□□□ -0.9
SRPK1-213ENST00000513367 SSH2Q76I76 1423 aa9.41□□□□□ -0.9
SRPK1-213ENST00000513367 ZIC2O95409 532 aaPredicted RBP9.41□□□□□ -0.9
SRPK1-213ENST00000513367 MDM2Q00987 491 aaPredicted RBP9.41□□□□□ -0.9
SRPK1-213ENST00000513367 TXNRD1Q16881 649 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms