RNA–Protein interactions for RNA: ENST00000513268.1

H2AFY-220, Transcript of H2A histone family member Y, humanhuman

TSL 3

Gene H2AFY, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFY-220ENST00000513268 MCM10Q7L590 875 aa11.98□□□□□ -0.49
H2AFY-220ENST00000513268 NARFQ9UHQ1 456 aa11.98□□□□□ -0.49
H2AFY-220ENST00000513268 ADAMTS8Q9UP79 889 aa11.98□□□□□ -0.49
H2AFY-220ENST00000513268 SIPA1L3O60292 1781 aaPredicted RBP11.97□□□□□ -0.49
H2AFY-220ENST00000513268 UBR2Q8IWV8 1755 aa11.97□□□□□ -0.49
H2AFY-220ENST00000513268 USP42Q9H9J4 1324 aaKnown RBP11.97□□□□□ -0.49
H2AFY-220ENST00000513268 ZPR1O75312 459 aa11.97□□□□□ -0.49
H2AFY-220ENST00000513268 RIPK4P57078 832 aa11.97□□□□□ -0.49
H2AFY-220ENST00000513268 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
H2AFY-220ENST00000513268 MYH14Q7Z406 1995 aaKnown RBP11.97□□□□□ -0.49
H2AFY-220ENST00000513268 VIRMAQ69YN4 1812 aaKnown RBP11.97□□□□□ -0.49
H2AFY-220ENST00000513268 ANP32CO43423 234 aa11.96□□□□□ -0.49
H2AFY-220ENST00000513268 TGFB2P61812 414 aa11.96□□□□□ -0.49
H2AFY-220ENST00000513268 NPM2Q86SE8 214 aaKnown RBP11.96□□□□□ -0.49
H2AFY-220ENST00000513268 TJP1Q07157 1748 aa11.95□□□□□ -0.5
H2AFY-220ENST00000513268 MMP10P09238 476 aa11.95□□□□□ -0.5
H2AFY-220ENST00000513268 PYGBP11216 843 aa11.95□□□□□ -0.5
H2AFY-220ENST00000513268 TM4SF1P30408 202 aa11.95□□□□□ -0.5
H2AFY-220ENST00000513268 DCTN1Q14203 1278 aa11.95□□□□□ -0.5
H2AFY-220ENST00000513268 OCEL1Q9H607 264 aa11.95□□□□□ -0.5
H2AFY-220ENST00000513268 ZBTB1Q9Y2K1 713 aa11.95□□□□□ -0.5
H2AFY-220ENST00000513268 PARP3Q9Y6F1 533 aa11.95□□□□□ -0.5
H2AFY-220ENST00000513268 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
H2AFY-220ENST00000513268 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
H2AFY-220ENST00000513268 MSL1Q68DK7 614 aa11.94□□□□□ -0.5
H2AFY-220ENST00000513268 CLEC4GQ6UXB4 293 aa11.94□□□□□ -0.5
H2AFY-220ENST00000513268 COL15A1P39059 1388 aa11.93□□□□□ -0.5
H2AFY-220ENST00000513268 ERBB4Q15303 1308 aa11.93□□□□□ -0.5
H2AFY-220ENST00000513268 KCNQ3O43525 872 aa11.93□□□□□ -0.5
H2AFY-220ENST00000513268 GIGYF1O75420 1035 aaPredicted RBP11.93□□□□□ -0.5
H2AFY-220ENST00000513268 EIF4A1P60842 406 aaKnown RBP11.93□□□□□ -0.5
H2AFY-220ENST00000513268 FKBP8Q14318 412 aa11.93□□□□□ -0.5
H2AFY-220ENST00000513268 USP16Q9Y5T5 823 aa11.93□□□□□ -0.5
H2AFY-220ENST00000513268 CHL1O00533 1208 aa11.92□□□□□ -0.5
H2AFY-220ENST00000513268 CANXP27824 592 aaKnown RBP11.92□□□□□ -0.5
H2AFY-220ENST00000513268 SMIM5Q71RC9 77 aa11.92□□□□□ -0.5
H2AFY-220ENST00000513268 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.92□□□□□ -0.5
H2AFY-220ENST00000513268 PDZRN3Q9UPQ7 1066 aa11.92□□□□□ -0.5
H2AFY-220ENST00000513268 UTRNP46939 3433 aa11.92□□□□□ -0.5
H2AFY-220ENST00000513268 A1BGP04217 495 aa11.91□□□□□ -0.5
H2AFY-220ENST00000513268 USPL1Q5W0Q7 1092 aa11.91□□□□□ -0.5
H2AFY-220ENST00000513268 CHMP4AQ9BY43 222 aa11.91□□□□□ -0.5
H2AFY-220ENST00000513268 PCDHB8Q9UN66 801 aa11.91□□□□□ -0.5
H2AFY-220ENST00000513268 POLRMTO00411 1230 aaKnown RBP11.9□□□□□ -0.5
H2AFY-220ENST00000513268 SNPHO15079 494 aa11.9□□□□□ -0.5
H2AFY-220ENST00000513268 HOXB7P09629 217 aa11.9□□□□□ -0.5
H2AFY-220ENST00000513268 GPR162Q16538 588 aa11.9□□□□□ -0.5
H2AFY-220ENST00000513268 CCDC27Q2M243 656 aa11.9□□□□□ -0.5
H2AFY-220ENST00000513268 NGEFQ8N5V2 710 aa11.9□□□□□ -0.5
H2AFY-220ENST00000513268 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
H2AFY-220ENST00000513268 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
H2AFY-220ENST00000513268 SRP68Q9UHB9 627 aaKnown RBP11.9□□□□□ -0.5
H2AFY-220ENST00000513268 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.5
H2AFY-220ENST00000513268 DLG5Q8TDM6 1919 aa11.9□□□□□ -0.51
H2AFY-220ENST00000513268 CCDC146Q8IYE0 955 aa11.89□□□□□ -0.51
H2AFY-220ENST00000513268 NLGN2Q8NFZ4 835 aa11.89□□□□□ -0.51
H2AFY-220ENST00000513268 MIS18AQ9NYP9 233 aa11.89□□□□□ -0.51
H2AFY-220ENST00000513268 ZNF652Q9Y2D9 606 aa11.89□□□□□ -0.51
H2AFY-220ENST00000513268 C10orf71Q711Q0 1435 aa11.88□□□□□ -0.51
H2AFY-220ENST00000513268 ERVV-1B6SEH8 477 aa11.88□□□□□ -0.51
H2AFY-220ENST00000513268 APAF1O14727 1248 aa11.88□□□□□ -0.51
H2AFY-220ENST00000513268 CAMTA2O94983 1202 aa11.88□□□□□ -0.51
H2AFY-220ENST00000513268 NFIXQ14938 502 aa11.88□□□□□ -0.51
H2AFY-220ENST00000513268 DZIP3Q86Y13 1208 aaKnown RBP11.88□□□□□ -0.51
H2AFY-220ENST00000513268 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
H2AFY-220ENST00000513268 GOLGB1Q14789 3259 aaKnown RBP11.87□□□□□ -0.51
H2AFY-220ENST00000513268 C4AP0C0L4 1744 aa11.87□□□□□ -0.51
H2AFY-220ENST00000513268 NBPF26B4DH59 902 aa11.87□□□□□ -0.51
H2AFY-220ENST00000513268 SERPINB2P05120 415 aa11.87□□□□□ -0.51
H2AFY-220ENST00000513268 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
H2AFY-220ENST00000513268 GNAI1P63096 354 aa11.87□□□□□ -0.51
H2AFY-220ENST00000513268 DDR1Q08345 913 aa11.87□□□□□ -0.51
H2AFY-220ENST00000513268 NEUROD2Q15784 382 aa11.87□□□□□ -0.51
H2AFY-220ENST00000513268 NBPF10Q6P3W6 841 aaKnown RBP11.87□□□□□ -0.51
H2AFY-220ENST00000513268 NBPF15Q8N660 670 aa11.87□□□□□ -0.51
H2AFY-220ENST00000513268 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
H2AFY-220ENST00000513268 THUMPD2Q9BTF0 503 aaKnown RBP11.87□□□□□ -0.51
H2AFY-220ENST00000513268 TMEM121BQ9BXQ6 578 aaPredicted RBP11.87□□□□□ -0.51
H2AFY-220ENST00000513268 MRS2Q9HD23 443 aa11.87□□□□□ -0.51
H2AFY-220ENST00000513268 IFT57Q9NWB7 429 aa11.87□□□□□ -0.51
H2AFY-220ENST00000513268 PRAMEF22A3QJZ6 481 aa11.86□□□□□ -0.51
H2AFY-220ENST00000513268 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
H2AFY-220ENST00000513268 KDM3BQ7LBC6 1761 aa11.86□□□□□ -0.51
H2AFY-220ENST00000513268 KIF13BQ9NQT8 1826 aa11.86□□□□□ -0.51
H2AFY-220ENST00000513268 CARMIL3Q8ND23 1372 aa11.85□□□□□ -0.51
H2AFY-220ENST00000513268 YY1P25490 414 aa11.85□□□□□ -0.51
H2AFY-220ENST00000513268 BRIP1Q9BX63 1249 aa11.85□□□□□ -0.51
H2AFY-220ENST00000513268 PIM2Q9P1W9 311 aa11.85□□□□□ -0.51
H2AFY-220ENST00000513268 RRP7AQ9Y3A4 280 aaKnown RBP11.85□□□□□ -0.51
H2AFY-220ENST00000513268 IL16Q14005 1332 aa11.85□□□□□ -0.51
H2AFY-220ENST00000513268 PDE6BP35913 854 aa11.84□□□□□ -0.51
H2AFY-220ENST00000513268 MARVELD3Q96A59 401 aa11.84□□□□□ -0.51
H2AFY-220ENST00000513268 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
H2AFY-220ENST00000513268 YBX3P16989 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
H2AFY-220ENST00000513268 KCNA3P22001 575 aa11.83□□□□□ -0.52
H2AFY-220ENST00000513268 CCDC184Q52MB2 194 aa11.83□□□□□ -0.52
H2AFY-220ENST00000513268 TBC1D9BQ66K14 1250 aa11.83□□□□□ -0.52
H2AFY-220ENST00000513268 TPTE2Q6XPS3 522 aa11.83□□□□□ -0.52
H2AFY-220ENST00000513268 ZNF330Q9Y3S2 320 aaPredicted RBP11.83□□□□□ -0.52
H2AFY-220ENST00000513268 MAP3K15Q6ZN16 1313 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms