RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 MTHFSDQ2M296 383 aaKnown RBP12.07□□□□□ -0.48
SNHG4-207ENST00000513259 FER1L6Q2WGJ9 1857 aa12.07□□□□□ -0.48
SNHG4-207ENST00000513259 TBC1D9BQ66K14 1250 aa12.07□□□□□ -0.48
SNHG4-207ENST00000513259 DPY19L2Q6NUT2 758 aa12.07□□□□□ -0.48
SNHG4-207ENST00000513259 UBR2Q8IWV8 1755 aa12.06□□□□□ -0.48
SNHG4-207ENST00000513259 EIF4G2P78344 907 aaKnown RBP eCLIP12.06□□□□□ -0.48
SNHG4-207ENST00000513259 ERFEQ4G0M1 354 aa12.06□□□□□ -0.48
SNHG4-207ENST00000513259 VSIG10Q8N0Z9 540 aa12.06□□□□□ -0.48
SNHG4-207ENST00000513259 MKRN1Q9UHC7 482 aaKnown RBP12.06□□□□□ -0.48
SNHG4-207ENST00000513259 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
SNHG4-207ENST00000513259 STARD3NLO95772 234 aa12.05□□□□□ -0.48
SNHG4-207ENST00000513259 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
SNHG4-207ENST00000513259 POTEJP0CG39 1038 aa12.05□□□□□ -0.48
SNHG4-207ENST00000513259 BRIP1Q9BX63 1249 aa12.05□□□□□ -0.48
SNHG4-207ENST00000513259 TBC1D2BQ9UPU7 963 aa12.05□□□□□ -0.48
SNHG4-207ENST00000513259 KNSTRNQ9Y448 316 aa12.05□□□□□ -0.48
SNHG4-207ENST00000513259 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
SNHG4-207ENST00000513259 A0A087WZG4 1122 aa12.04□□□□□ -0.48
SNHG4-207ENST00000513259 DDNO94850 711 aaPredicted RBP12.04□□□□□ -0.48
SNHG4-207ENST00000513259 PDE6BP35913 854 aa12.04□□□□□ -0.48
SNHG4-207ENST00000513259 PRR5LQ6MZQ0 368 aa12.04□□□□□ -0.48
SNHG4-207ENST00000513259 ZNF579Q8NAF0 562 aaKnown RBP12.04□□□□□ -0.48
SNHG4-207ENST00000513259 SLX4Q8IY92 1834 aa12.04□□□□□ -0.48
SNHG4-207ENST00000513259 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
SNHG4-207ENST00000513259 TTC5Q8N0Z6 440 aa12.03□□□□□ -0.48
SNHG4-207ENST00000513259 ZNF496Q96IT1 587 aaPredicted RBP12.03□□□□□ -0.48
SNHG4-207ENST00000513259 PDZRN3Q9UPQ7 1066 aa12.03□□□□□ -0.48
SNHG4-207ENST00000513259 ZNF330Q9Y3S2 320 aaPredicted RBP12.03□□□□□ -0.48
SNHG4-207ENST00000513259 GABBR2O75899 941 aa12.02□□□□□ -0.49
SNHG4-207ENST00000513259 TAOK3Q9H2K8 898 aa12.02□□□□□ -0.49
SNHG4-207ENST00000513259 SCN7AQ01118 1682 aa12.01□□□□□ -0.49
SNHG4-207ENST00000513259 FOXN1O15353 648 aa12.01□□□□□ -0.49
SNHG4-207ENST00000513259 A1BGP04217 495 aa12.01□□□□□ -0.49
SNHG4-207ENST00000513259 IL17REQ8NFR9 667 aa12.01□□□□□ -0.49
SNHG4-207ENST00000513259 LTBP3Q9NS15 1303 aa12.01□□□□□ -0.49
SNHG4-207ENST00000513259 HEG1Q9ULI3 1381 aa12.01□□□□□ -0.49
SNHG4-207ENST00000513259 DIAPH1O60610 1272 aaKnown RBP12□□□□□ -0.49
SNHG4-207ENST00000513259 SRGNP10124 158 aa12□□□□□ -0.49
SNHG4-207ENST00000513259 IL6STP40189 918 aaPredicted RBP12□□□□□ -0.49
SNHG4-207ENST00000513259 STYK1Q6J9G0 422 aa12□□□□□ -0.49
SNHG4-207ENST00000513259 PRPF40BQ6NWY9 871 aaKnown RBP12□□□□□ -0.49
SNHG4-207ENST00000513259 ZNF790Q6PG37 636 aa12□□□□□ -0.49
SNHG4-207ENST00000513259 CCER1Q8TC90 406 aaPredicted RBP12□□□□□ -0.49
SNHG4-207ENST00000513259 CNKSR1Q969H4 720 aa12□□□□□ -0.49
SNHG4-207ENST00000513259 SETDB2Q96T68 719 aa12□□□□□ -0.49
SNHG4-207ENST00000513259 TEX13AQ9BXU3 409 aaPredicted RBP12□□□□□ -0.49
SNHG4-207ENST00000513259 CAMTA2O94983 1202 aa11.99□□□□□ -0.49
SNHG4-207ENST00000513259 TEFQ10587 303 aa11.99□□□□□ -0.49
SNHG4-207ENST00000513259 CNBD1Q8NA66 436 aa11.99□□□□□ -0.49
SNHG4-207ENST00000513259 PASKQ96RG2 1323 aa11.99□□□□□ -0.49
SNHG4-207ENST00000513259 CNTNAP1P78357 1384 aa11.99□□□□□ -0.49
SNHG4-207ENST00000513259 SIPA1L3O60292 1781 aaPredicted RBP11.99□□□□□ -0.49
SNHG4-207ENST00000513259 ARFGEF2Q9Y6D5 1785 aa11.98□□□□□ -0.49
SNHG4-207ENST00000513259 GNAT3A8MTJ3 354 aa11.98□□□□□ -0.49
SNHG4-207ENST00000513259 NPHP1O15259 732 aa11.98□□□□□ -0.49
SNHG4-207ENST00000513259 KCNQ3O43525 872 aa11.98□□□□□ -0.49
SNHG4-207ENST00000513259 ST5P78524 1137 aa11.98□□□□□ -0.49
SNHG4-207ENST00000513259 MASTLQ96GX5 879 aa11.98□□□□□ -0.49
SNHG4-207ENST00000513259 TAF1DQ9H5J8 278 aaPredicted RBP11.98□□□□□ -0.49
SNHG4-207ENST00000513259 SCN4AP35499 1836 aa11.97□□□□□ -0.49
SNHG4-207ENST00000513259 ITGBL1O95965 494 aaPredicted RBP11.97□□□□□ -0.49
SNHG4-207ENST00000513259 PIP4K2AP48426 406 aaPredicted RBP11.97□□□□□ -0.49
SNHG4-207ENST00000513259 VEGFBP49765 207 aa11.97□□□□□ -0.49
SNHG4-207ENST00000513259 SOGA3Q5TF21 947 aa11.97□□□□□ -0.49
SNHG4-207ENST00000513259 LDHDQ86WU2 507 aa11.97□□□□□ -0.49
SNHG4-207ENST00000513259 DZIP3Q86Y13 1208 aaKnown RBP11.97□□□□□ -0.49
SNHG4-207ENST00000513259 C7orf43Q8WVR3 580 aa11.97□□□□□ -0.49
SNHG4-207ENST00000513259 FMNL2Q96PY5 1086 aa11.97□□□□□ -0.49
SNHG4-207ENST00000513259 PRDM10Q9NQV6 1147 aa11.97□□□□□ -0.49
SNHG4-207ENST00000513259 CLSPNQ9HAW4 1339 aa11.96□□□□□ -0.49
SNHG4-207ENST00000513259 IQCA1LA6NCM1 817 aa11.96□□□□□ -0.49
SNHG4-207ENST00000513259 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.49
SNHG4-207ENST00000513259 CC2D1BQ5T0F9 858 aaKnown RBP11.96□□□□□ -0.49
SNHG4-207ENST00000513259 OLFM4Q6UX06 510 aa11.96□□□□□ -0.49
SNHG4-207ENST00000513259 NPM2Q86SE8 214 aaKnown RBP11.96□□□□□ -0.49
SNHG4-207ENST00000513259 L3MBTL3Q96JM7 780 aaPredicted RBP11.96□□□□□ -0.49
SNHG4-207ENST00000513259 ZNF277Q9NRM2 450 aaPredicted RBP11.96□□□□□ -0.49
SNHG4-207ENST00000513259 BCORQ6W2J9 1755 aa11.96□□□□□ -0.49
SNHG4-207ENST00000513259 ZNF541Q9H0D2 1346 aa11.95□□□□□ -0.5
SNHG4-207ENST00000513259 TMEM88BA6NKF7 163 aa11.95□□□□□ -0.5
SNHG4-207ENST00000513259 PER1O15534 1290 aaPredicted RBP11.95□□□□□ -0.5
SNHG4-207ENST00000513259 CTCFP49711 727 aaPredicted RBP11.95□□□□□ -0.5
SNHG4-207ENST00000513259 VASPP50552 380 aaPredicted RBP11.95□□□□□ -0.5
SNHG4-207ENST00000513259 CCDC93Q567U6 631 aa11.95□□□□□ -0.5
SNHG4-207ENST00000513259 EAPPQ56P03 285 aaPredicted RBP11.95□□□□□ -0.5
SNHG4-207ENST00000513259 GAS2L2Q8NHY3 880 aa11.95□□□□□ -0.5
SNHG4-207ENST00000513259 AIDAQ96BJ3 306 aa11.95□□□□□ -0.5
SNHG4-207ENST00000513259 USP16Q9Y5T5 823 aa11.95□□□□□ -0.5
SNHG4-207ENST00000513259 PRAMEF22A3QJZ6 481 aa11.94□□□□□ -0.5
SNHG4-207ENST00000513259 BTBD11A6QL63 1104 aa11.94□□□□□ -0.5
SNHG4-207ENST00000513259 LBX1P52954 281 aa11.94□□□□□ -0.5
SNHG4-207ENST00000513259 FKBP4Q02790 459 aaKnown RBP eCLIP11.94□□□□□ -0.5
SNHG4-207ENST00000513259 CNGB1Q14028 1251 aaPredicted RBP11.94□□□□□ -0.5
SNHG4-207ENST00000513259 NBPF5PQ86XG9 351 aaPredicted RBP11.94□□□□□ -0.5
SNHG4-207ENST00000513259 WBP1LQ9NX94 342 aa11.94□□□□□ -0.5
SNHG4-207ENST00000513259 COL3A1P02461 1466 aaPredicted RBP11.94□□□□□ -0.5
SNHG4-207ENST00000513259 KIF7Q2M1P5 1343 aa11.93□□□□□ -0.5
SNHG4-207ENST00000513259 NPR1P16066 1061 aa11.93□□□□□ -0.5
SNHG4-207ENST00000513259 PHACTR3Q96KR7 559 aa11.93□□□□□ -0.5
SNHG4-207ENST00000513259 HACL1Q9UJ83 578 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms