RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	HDGFL1	Q5TGJ6	251 aa		11.29	□□□□□ -0.6
ACSF2-223	ENST00000513101	C8orf58	Q8NAV2	365 aa		11.29	□□□□□ -0.6
ACSF2-223	ENST00000513101	ZNF652	Q9Y2D9	606 aa		11.29	□□□□□ -0.6
ACSF2-223	ENST00000513101	GTF3C3	Q9Y5Q9	886 aa		11.29	□□□□□ -0.6
ACSF2-223	ENST00000513101	SERPINB2	P05120	415 aa		11.28	□□□□□ -0.6
ACSF2-223	ENST00000513101	TGFB2	P61812	414 aa		11.28	□□□□□ -0.6
ACSF2-223	ENST00000513101	TBC1D9B	Q66K14	1250 aa		11.28	□□□□□ -0.6
ACSF2-223	ENST00000513101	TTLL7	Q6ZT98	887 aa		11.28	□□□□□ -0.6
ACSF2-223	ENST00000513101	TSR2	Q969E8	191 aa	Known RBP	11.28	□□□□□ -0.6
ACSF2-223	ENST00000513101	MYH16	Q9H6N6	1097 aa		11.28	□□□□□ -0.6
ACSF2-223	ENST00000513101	DBF4	Q9UBU7	674 aa	Predicted RBP	11.28	□□□□□ -0.6
ACSF2-223	ENST00000513101	MAP3K15	Q6ZN16	1313 aa		11.28	□□□□□ -0.6
ACSF2-223	ENST00000513101	ELL2	O00472	640 aa	Predicted RBP	11.27	□□□□□ -0.61
ACSF2-223	ENST00000513101	CCDC30	Q5VVM6	783 aa		11.27	□□□□□ -0.61
ACSF2-223	ENST00000513101	KIF6	Q6ZMV9	814 aa		11.27	□□□□□ -0.61
ACSF2-223	ENST00000513101	KLHL34	Q8N239	644 aa		11.27	□□□□□ -0.61
ACSF2-223	ENST00000513101	NECTIN2	Q92692	538 aa		11.27	□□□□□ -0.61
ACSF2-223	ENST00000513101	SETDB2	Q96T68	719 aa		11.27	□□□□□ -0.61
ACSF2-223	ENST00000513101	HYPK	Q9NX55	129 aa		11.27	□□□□□ -0.61
ACSF2-223	ENST00000513101	RCAN3	Q9UKA8	241 aa		11.27	□□□□□ -0.61
ACSF2-223	ENST00000513101	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.27	□□□□□ -0.61
ACSF2-223	ENST00000513101	DCAF8L1	A6NGE4	600 aa		11.26	□□□□□ -0.61
ACSF2-223	ENST00000513101	HLF	Q16534	295 aa		11.26	□□□□□ -0.61
ACSF2-223	ENST00000513101	PROSER3	Q2NL68	480 aa		11.26	□□□□□ -0.61
ACSF2-223	ENST00000513101	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.26	□□□□□ -0.61
ACSF2-223	ENST00000513101	BICDL1	Q6ZP65	573 aa		11.26	□□□□□ -0.61
ACSF2-223	ENST00000513101	COPS6	Q7L5N1	327 aa		11.26	□□□□□ -0.61
ACSF2-223	ENST00000513101	TSPYL6	Q8N831	410 aa		11.26	□□□□□ -0.61
ACSF2-223	ENST00000513101	NLGN2	Q8NFZ4	835 aa		11.26	□□□□□ -0.61
ACSF2-223	ENST00000513101	CHPF2	Q9P2E5	772 aa		11.26	□□□□□ -0.61
ACSF2-223	ENST00000513101	FANCI	Q9NVI1	1328 aa		11.26	□□□□□ -0.61
ACSF2-223	ENST00000513101	C4A	P0C0L4	1744 aa		11.26	□□□□□ -0.61
ACSF2-223	ENST00000513101	ANXA1	P04083	346 aa		11.25	□□□□□ -0.61
ACSF2-223	ENST00000513101	TWISTNB	Q3B726	338 aa	Predicted RBP	11.25	□□□□□ -0.61
ACSF2-223	ENST00000513101	XAGE3	Q8WTP9	111 aa		11.25	□□□□□ -0.61
ACSF2-223	ENST00000513101	CARMIL3	Q8ND23	1372 aa		11.25	□□□□□ -0.61
ACSF2-223	ENST00000513101	C10orf71	Q711Q0	1435 aa		11.25	□□□□□ -0.61
ACSF2-223	ENST00000513101	LAMB4	A4D0S4	1761 aa		11.24	□□□□□ -0.61
ACSF2-223	ENST00000513101	VAMP4	O75379	141 aa		11.24	□□□□□ -0.61
ACSF2-223	ENST00000513101	EXOSC9	Q06265	439 aa	Known RBP	11.24	□□□□□ -0.61
ACSF2-223	ENST00000513101	AIMP1	Q12904	312 aa	Known RBP	11.24	□□□□□ -0.61
ACSF2-223	ENST00000513101	ZNF428	Q96B54	188 aa		11.24	□□□□□ -0.61
ACSF2-223	ENST00000513101	ZBTB3	Q9H5J0	574 aa		11.24	□□□□□ -0.61
ACSF2-223	ENST00000513101	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
ACSF2-223	ENST00000513101	HSP90AB3P	Q58FF7	597 aa		11.23	□□□□□ -0.61
ACSF2-223	ENST00000513101	PRR5L	Q6MZQ0	368 aa		11.23	□□□□□ -0.61
ACSF2-223	ENST00000513101	TPTE2	Q6XPS3	522 aa		11.23	□□□□□ -0.61
ACSF2-223	ENST00000513101	ANKRD13D	Q6ZTN6	518 aa		11.23	□□□□□ -0.61
ACSF2-223	ENST00000513101	ZNF34	Q8IZ26	560 aa		11.23	□□□□□ -0.61
ACSF2-223	ENST00000513101	PLBD2	Q8NHP8	589 aa		11.23	□□□□□ -0.61
ACSF2-223	ENST00000513101	BRIP1	Q9BX63	1249 aa		11.23	□□□□□ -0.61
ACSF2-223	ENST00000513101	PDZRN3	Q9UPQ7	1066 aa		11.23	□□□□□ -0.61
ACSF2-223	ENST00000513101	NEFL	P07196	543 aa		11.22	□□□□□ -0.61
ACSF2-223	ENST00000513101	BRPF1	P55201	1214 aa	Predicted RBP	11.22	□□□□□ -0.61
ACSF2-223	ENST00000513101	RRP1	P56182	461 aa	Known RBP	11.22	□□□□□ -0.61
ACSF2-223	ENST00000513101	TCIRG1	Q13488	830 aa		11.22	□□□□□ -0.61
ACSF2-223	ENST00000513101	PARP10	Q53GL7	1025 aa		11.22	□□□□□ -0.61
ACSF2-223	ENST00000513101	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.22	□□□□□ -0.61
ACSF2-223	ENST00000513101	CNBD1	Q8NA66	436 aa		11.22	□□□□□ -0.61
ACSF2-223	ENST00000513101	STK31	Q9BXU1	1019 aa		11.22	□□□□□ -0.61
ACSF2-223	ENST00000513101	NYX	Q9GZU5	481 aa		11.22	□□□□□ -0.61
ACSF2-223	ENST00000513101	ATP10D	Q9P241	1426 aa		11.22	□□□□□ -0.61
ACSF2-223	ENST00000513101		A0A0G2JLW4	131 aa		11.21	□□□□□ -0.61
ACSF2-223	ENST00000513101	GRIN3B	O60391	1043 aa		11.21	□□□□□ -0.61
ACSF2-223	ENST00000513101	DPEP1	P16444	411 aa		11.21	□□□□□ -0.61
ACSF2-223	ENST00000513101	KCNA3	P22001	575 aa		11.21	□□□□□ -0.61
ACSF2-223	ENST00000513101	PDE6B	P35913	854 aa		11.21	□□□□□ -0.61
ACSF2-223	ENST00000513101	ST5	P78524	1137 aa		11.21	□□□□□ -0.61
ACSF2-223	ENST00000513101	GPR162	Q16538	588 aa		11.21	□□□□□ -0.61
ACSF2-223	ENST00000513101	PHAX	Q9H814	394 aa	Known RBP	11.21	□□□□□ -0.61
ACSF2-223	ENST00000513101	SCN7A	Q01118	1682 aa		11.2	□□□□□ -0.62
ACSF2-223	ENST00000513101	PXDNL	A1KZ92	1463 aa		11.2	□□□□□ -0.62
ACSF2-223	ENST00000513101	KLRG2	A4D1S0	409 aa	Predicted RBP	11.2	□□□□□ -0.62
ACSF2-223	ENST00000513101	NPHP1	O15259	732 aa		11.2	□□□□□ -0.62
ACSF2-223	ENST00000513101	DDX58	O95786	925 aa	Known RBP	11.2	□□□□□ -0.62
ACSF2-223	ENST00000513101	SLC4A2	P04920	1241 aa		11.2	□□□□□ -0.62
ACSF2-223	ENST00000513101	TRIM28	Q13263	835 aa	Known RBP	11.2	□□□□□ -0.62
ACSF2-223	ENST00000513101	PPP1R42	Q7Z4L9	355 aa		11.2	□□□□□ -0.62
ACSF2-223	ENST00000513101	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.19	□□□□□ -0.62
ACSF2-223	ENST00000513101	UBN2	Q6ZU65	1347 aa		11.19	□□□□□ -0.62
ACSF2-223	ENST00000513101		H0YIN7	160 aa		11.19	□□□□□ -0.62
ACSF2-223	ENST00000513101	GPT	P24298	496 aa		11.19	□□□□□ -0.62
ACSF2-223	ENST00000513101	GTF2E1	P29083	439 aa	Predicted RBP	11.19	□□□□□ -0.62
ACSF2-223	ENST00000513101	RARS	P54136	660 aa	Known RBP	11.19	□□□□□ -0.62
ACSF2-223	ENST00000513101	SUSD4	Q5VX71	490 aa		11.19	□□□□□ -0.62
ACSF2-223	ENST00000513101	RIC3	Q7Z5B4	369 aa		11.19	□□□□□ -0.62
ACSF2-223	ENST00000513101	NLRP10	Q86W26	655 aa		11.19	□□□□□ -0.62
ACSF2-223	ENST00000513101	ISCA1	Q9BUE6	129 aa		11.19	□□□□□ -0.62
ACSF2-223	ENST00000513101	PIM2	Q9P1W9	311 aa		11.19	□□□□□ -0.62
ACSF2-223	ENST00000513101	NRXN2	Q9P2S2	1712 aa		11.18	□□□□□ -0.62
ACSF2-223	ENST00000513101	CHD4	Q14839	1912 aa		11.18	□□□□□ -0.62
ACSF2-223	ENST00000513101	NTSR2	O95665	410 aa		11.18	□□□□□ -0.62
ACSF2-223	ENST00000513101	YBX3	P16989	372 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
ACSF2-223	ENST00000513101	CHRNA5	P30532	468 aa		11.18	□□□□□ -0.62
ACSF2-223	ENST00000513101	ALDH1L2	Q3SY69	923 aa		11.18	□□□□□ -0.62
ACSF2-223	ENST00000513101	KSR2	Q6VAB6	950 aa		11.18	□□□□□ -0.62
ACSF2-223	ENST00000513101	C2CD5	Q86YS7	1000 aa		11.18	□□□□□ -0.62
ACSF2-223	ENST00000513101	PELP1	Q8IZL8	1130 aa	Known RBP	11.18	□□□□□ -0.62
ACSF2-223	ENST00000513101	UTP14A	Q9BVJ6	771 aa	Known RBP	11.18	□□□□□ -0.62
ACSF2-223	ENST00000513101	BCOR	Q6W2J9	1755 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms