RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 GTF3C3Q9Y5Q9 886 aa17.25■□□□□ 0.35
SDHA-215ENST00000512962 PLEKHG2Q9H7P9 1386 aa17.25■□□□□ 0.35
SDHA-215ENST00000512962 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
SDHA-215ENST00000512962 GYS1P13807 737 aa17.24■□□□□ 0.35
SDHA-215ENST00000512962 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
SDHA-215ENST00000512962 TJP1Q07157 1748 aa17.24■□□□□ 0.35
SDHA-215ENST00000512962 ST20-MTHFSA0A0A6YYL1 179 aa17.23■□□□□ 0.35
SDHA-215ENST00000512962 FSTL1Q12841 308 aa17.23■□□□□ 0.35
SDHA-215ENST00000512962 RRAGCQ9HB90 399 aa17.23■□□□□ 0.35
SDHA-215ENST00000512962 MAP3K9P80192 1104 aa17.22■□□□□ 0.35
SDHA-215ENST00000512962 SLC39A7Q92504 469 aa17.22■□□□□ 0.35
SDHA-215ENST00000512962 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
SDHA-215ENST00000512962 CCDC88AQ3V6T2 1871 aa17.22■□□□□ 0.35
SDHA-215ENST00000512962 POTEFA5A3E0 1075 aa17.21■□□□□ 0.35
SDHA-215ENST00000512962 C16orf71Q8IYS4 520 aaPredicted RBP17.21■□□□□ 0.35
SDHA-215ENST00000512962 DCAF5Q96JK2 942 aa17.21■□□□□ 0.35
SDHA-215ENST00000512962 RNF181Q9P0P0 153 aa17.21■□□□□ 0.35
SDHA-215ENST00000512962 KIF24Q5T7B8 1368 aa17.2■□□□□ 0.34
SDHA-215ENST00000512962 HSPA1AP0DMV8 641 aaKnown RBP17.2■□□□□ 0.34
SDHA-215ENST00000512962 HSPA1BP0DMV9 641 aaKnown RBP17.2■□□□□ 0.34
SDHA-215ENST00000512962 PHKG2P15735 406 aa17.2■□□□□ 0.34
SDHA-215ENST00000512962 HMGB2P26583 209 aaKnown RBP17.2■□□□□ 0.34
SDHA-215ENST00000512962 TMF1P82094 1093 aa17.2■□□□□ 0.34
SDHA-215ENST00000512962 DDR1Q08345 913 aa17.2■□□□□ 0.34
SDHA-215ENST00000512962 CCDC87Q9NVE4 849 aa17.2■□□□□ 0.34
SDHA-215ENST00000512962 DLEC1Q9Y238 1755 aa17.2■□□□□ 0.34
SDHA-215ENST00000512962 AFDNP55196 1824 aaKnown RBP17.19■□□□□ 0.34
SDHA-215ENST00000512962 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
SDHA-215ENST00000512962 CHRNA5P30532 468 aa17.19■□□□□ 0.34
SDHA-215ENST00000512962 TRAPPC3LQ5T215 181 aa17.19■□□□□ 0.34
SDHA-215ENST00000512962 NLGN1Q8N2Q7 840 aa17.19■□□□□ 0.34
SDHA-215ENST00000512962 RTCBQ9Y3I0 505 aaKnown RBP17.19■□□□□ 0.34
SDHA-215ENST00000512962 RASSF7Q02833 373 aa17.18■□□□□ 0.34
SDHA-215ENST00000512962 OXER1Q8TDS5 423 aa17.18■□□□□ 0.34
SDHA-215ENST00000512962 EYA1Q99502 592 aa17.18■□□□□ 0.34
SDHA-215ENST00000512962 SRP68Q9UHB9 627 aaKnown RBP17.18■□□□□ 0.34
SDHA-215ENST00000512962 KDM6AO15550 1401 aaPredicted RBP17.17■□□□□ 0.34
SDHA-215ENST00000512962 SPG7Q9UQ90 795 aa17.17■□□□□ 0.34
SDHA-215ENST00000512962 KDM2BQ8NHM5 1336 aa17.17■□□□□ 0.34
SDHA-215ENST00000512962 C7P10643 843 aa17.16■□□□□ 0.34
SDHA-215ENST00000512962 CARD14Q9BXL6 1004 aa17.16■□□□□ 0.34
SDHA-215ENST00000512962 CNTNAP4Q9C0A0 1308 aa17.16■□□□□ 0.34
SDHA-215ENST00000512962 PIM2Q9P1W9 311 aa17.15■□□□□ 0.34
SDHA-215ENST00000512962 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
SDHA-215ENST00000512962 NRXN2Q9P2S2 1712 aa17.14■□□□□ 0.33
SDHA-215ENST00000512962 GRXCR2A6NFK2 248 aa17.14■□□□□ 0.33
SDHA-215ENST00000512962 RPS6KA4O75676 772 aa17.14■□□□□ 0.33
SDHA-215ENST00000512962 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
SDHA-215ENST00000512962 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
SDHA-215ENST00000512962 SMC1BQ8NDV3 1235 aa17.14■□□□□ 0.33
SDHA-215ENST00000512962 GPR37O15354 613 aa17.13■□□□□ 0.33
SDHA-215ENST00000512962 PPM1GO15355 546 aaPredicted RBP17.13■□□□□ 0.33
SDHA-215ENST00000512962 RC3H1Q5TC82 1133 aaKnown RBP17.13■□□□□ 0.33
SDHA-215ENST00000512962 METRNQ9UJH8 293 aa17.13■□□□□ 0.33
SDHA-215ENST00000512962 RFC4P35249 363 aa17.12■□□□□ 0.33
SDHA-215ENST00000512962 POTEHQ6S545 545 aa17.12■□□□□ 0.33
SDHA-215ENST00000512962 KRI1Q8N9T8 703 aaKnown RBP17.12■□□□□ 0.33
SDHA-215ENST00000512962 WASHC2AQ641Q2 1341 aa17.11■□□□□ 0.33
SDHA-215ENST00000512962 USP42Q9H9J4 1324 aaKnown RBP17.11■□□□□ 0.33
SDHA-215ENST00000512962 POTECB2RU33 542 aa17.1■□□□□ 0.33
SDHA-215ENST00000512962 TIMELESSQ9UNS1 1208 aa17.1■□□□□ 0.33
SDHA-215ENST00000512962 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
SDHA-215ENST00000512962 POTEIP0CG38 1075 aa17.09■□□□□ 0.33
SDHA-215ENST00000512962 ANKRD31Q8N7Z5 1873 aa17.09■□□□□ 0.33
SDHA-215ENST00000512962 COL11A2P13942 1736 aaPredicted RBP17.08■□□□□ 0.32
SDHA-215ENST00000512962 CRKLP46109 303 aaKnown RBP17.08■□□□□ 0.32
SDHA-215ENST00000512962 EIF4A2Q14240 407 aaKnown RBP17.08■□□□□ 0.32
SDHA-215ENST00000512962 DICER1Q9UPY3 1922 aaKnown RBP17.08■□□□□ 0.32
SDHA-215ENST00000512962 SCN11AQ9UI33 1791 aa17.07■□□□□ 0.32
SDHA-215ENST00000512962 CARMIL3Q8ND23 1372 aa17.07■□□□□ 0.32
SDHA-215ENST00000512962 OSBPP22059 807 aa17.07■□□□□ 0.32
SDHA-215ENST00000512962 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
SDHA-215ENST00000512962 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
SDHA-215ENST00000512962 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
SDHA-215ENST00000512962 TM4SF1P30408 202 aa17.06■□□□□ 0.32
SDHA-215ENST00000512962 C3orf67Q6ZVT6 689 aa17.06■□□□□ 0.32
SDHA-215ENST00000512962 POLKQ9UBT6 870 aa17.06■□□□□ 0.32
SDHA-215ENST00000512962 ERVV-2B6SEH9 535 aa17.05■□□□□ 0.32
SDHA-215ENST00000512962 NFKBIEO00221 500 aa17.05■□□□□ 0.32
SDHA-215ENST00000512962 INTS5Q6P9B9 1019 aaKnown RBP17.05■□□□□ 0.32
SDHA-215ENST00000512962 FER1L6Q2WGJ9 1857 aa17.05■□□□□ 0.32
SDHA-215ENST00000512962 CACNA1SQ13698 1873 aa17.04■□□□□ 0.32
SDHA-215ENST00000512962 POTEJP0CG39 1038 aa17.04■□□□□ 0.32
SDHA-215ENST00000512962 VEGFAP15692 232 aaPredicted RBP17.04■□□□□ 0.32
SDHA-215ENST00000512962 DDX12PQ92771 950 aa17.04■□□□□ 0.32
SDHA-215ENST00000512962 ZC3H4Q9UPT8 1303 aaKnown RBP17.03■□□□□ 0.32
SDHA-215ENST00000512962 FOXN1O15353 648 aa17.03■□□□□ 0.32
SDHA-215ENST00000512962 TBC1D12O60347 775 aa17.03■□□□□ 0.32
SDHA-215ENST00000512962 SLC34A2O95436 690 aa17.03■□□□□ 0.32
SDHA-215ENST00000512962 LMNB1P20700 586 aa17.03■□□□□ 0.32
SDHA-215ENST00000512962 MKRN1Q9UHC7 482 aaKnown RBP17.03■□□□□ 0.32
SDHA-215ENST00000512962 EVI5O60447 810 aa17.02■□□□□ 0.32
SDHA-215ENST00000512962 USPL1Q5W0Q7 1092 aa17.02■□□□□ 0.32
SDHA-215ENST00000512962 CABP4P57796 275 aa17■□□□□ 0.31
SDHA-215ENST00000512962 NFIXQ14938 502 aa17■□□□□ 0.31
SDHA-215ENST00000512962 ZNF530Q6P9A1 599 aaPredicted RBP17■□□□□ 0.31
SDHA-215ENST00000512962 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
SDHA-215ENST00000512962 PTCD2Q8WV60 388 aaKnown RBP17■□□□□ 0.31
SDHA-215ENST00000512962 BCL2L12Q9HB09 334 aa17■□□□□ 0.31
SDHA-215ENST00000512962 SOS1Q07889 1333 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms