RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SETDB2Q96T68 719 aa18.15■□□□□ 0.5
DDX41-212ENST00000511040 ZBTB3Q9H5J0 574 aa18.15■□□□□ 0.5
DDX41-212ENST00000511040 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
DDX41-212ENST00000511040 KIAA1551Q9HCM1 1747 aa18.15■□□□□ 0.5
DDX41-212ENST00000511040 TGFB2P61812 414 aa18.14■□□□□ 0.49
DDX41-212ENST00000511040 LRP10Q7Z4F1 713 aa18.14■□□□□ 0.49
DDX41-212ENST00000511040 C8orf58Q8NAV2 365 aa18.14■□□□□ 0.49
DDX41-212ENST00000511040 CHPF2Q9P2E5 772 aa18.14■□□□□ 0.49
DDX41-212ENST00000511040 CARMIL3Q8ND23 1372 aa18.14■□□□□ 0.49
DDX41-212ENST00000511040 CHRNA5P30532 468 aa18.13■□□□□ 0.49
DDX41-212ENST00000511040 CLEC4GQ6UXB4 293 aa18.13■□□□□ 0.49
DDX41-212ENST00000511040 MAP3K15Q6ZN16 1313 aa18.13■□□□□ 0.49
DDX41-212ENST00000511040 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
DDX41-212ENST00000511040 FAM177BA6PVY3 158 aa18.12■□□□□ 0.49
DDX41-212ENST00000511040 CCER2I3L3R5 266 aa18.12■□□□□ 0.49
DDX41-212ENST00000511040 NPHP1O15259 732 aa18.12■□□□□ 0.49
DDX41-212ENST00000511040 AIMP1Q12904 312 aaKnown RBP18.12■□□□□ 0.49
DDX41-212ENST00000511040 XAGE3Q8WTP9 111 aa18.12■□□□□ 0.49
DDX41-212ENST00000511040 NIP7Q9Y221 180 aaKnown RBP eCLIP18.12■□□□□ 0.49
DDX41-212ENST00000511040 HOXB7P09629 217 aa18.11■□□□□ 0.49
DDX41-212ENST00000511040 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
DDX41-212ENST00000511040 PRR5LQ6MZQ0 368 aa18.11■□□□□ 0.49
DDX41-212ENST00000511040 COPS6Q7L5N1 327 aa18.11■□□□□ 0.49
DDX41-212ENST00000511040 MIER1Q8N108 512 aa18.11■□□□□ 0.49
DDX41-212ENST00000511040 TSPYL6Q8N831 410 aa18.11■□□□□ 0.49
DDX41-212ENST00000511040 DDX21Q9NR30 783 aaKnown RBP eCLIP18.11■□□□□ 0.49
DDX41-212ENST00000511040 IL16Q14005 1332 aa18.1■□□□□ 0.49
DDX41-212ENST00000511040 ERVV-1B6SEH8 477 aa18.1■□□□□ 0.49
DDX41-212ENST00000511040 KCNA3P22001 575 aa18.1■□□□□ 0.49
DDX41-212ENST00000511040 NBPF5PQ86XG9 351 aaPredicted RBP18.1■□□□□ 0.49
DDX41-212ENST00000511040 CNBD1Q8NA66 436 aa18.1■□□□□ 0.49
DDX41-212ENST00000511040 BCS1LQ9Y276 419 aa18.1■□□□□ 0.49
DDX41-212ENST00000511040 GPTP24298 496 aa18.09■□□□□ 0.49
DDX41-212ENST00000511040 WDR63Q8IWG1 891 aa18.09■□□□□ 0.49
DDX41-212ENST00000511040 NUP98P52948 1817 aa18.09■□□□□ 0.49
DDX41-212ENST00000511040 RGL2O15211 777 aa18.08■□□□□ 0.48
DDX41-212ENST00000511040 GRIN3BO60391 1043 aa18.08■□□□□ 0.48
DDX41-212ENST00000511040 C2CD5Q86YS7 1000 aa18.08■□□□□ 0.48
DDX41-212ENST00000511040 DBF4Q9UBU7 674 aaPredicted RBP18.08■□□□□ 0.48
DDX41-212ENST00000511040 FANCIQ9NVI1 1328 aa18.07■□□□□ 0.48
DDX41-212ENST00000511040 TCERG1O14776 1098 aaKnown RBP18.07■□□□□ 0.48
DDX41-212ENST00000511040 YY1P25490 414 aa18.07■□□□□ 0.48
DDX41-212ENST00000511040 ST5P78524 1137 aa18.07■□□□□ 0.48
DDX41-212ENST00000511040 SPINK5Q9NQ38 1064 aaPredicted RBP18.07■□□□□ 0.48
DDX41-212ENST00000511040 PIM2Q9P1W9 311 aa18.07■□□□□ 0.48
DDX41-212ENST00000511040 ANKRD31Q8N7Z5 1873 aa18.07■□□□□ 0.48
DDX41-212ENST00000511040 GIGYF2Q6Y7W6 1299 aaKnown RBP18.06■□□□□ 0.48
DDX41-212ENST00000511040 ATP10DQ9P241 1426 aa18.06■□□□□ 0.48
DDX41-212ENST00000511040 UBN2Q6ZU65 1347 aa18.05■□□□□ 0.48
DDX41-212ENST00000511040 DALRD3Q5D0E6 543 aaKnown RBP18.05■□□□□ 0.48
DDX41-212ENST00000511040 BRIP1Q9BX63 1249 aa18.05■□□□□ 0.48
DDX41-212ENST00000511040 HYPKQ9NX55 129 aa18.05■□□□□ 0.48
DDX41-212ENST00000511040 BRCA1P38398 1863 aaKnown RBP18.05■□□□□ 0.48
DDX41-212ENST00000511040 GOLGB1Q14789 3259 aaKnown RBP18.04■□□□□ 0.48
DDX41-212ENST00000511040 H0YIN7 160 aa18.04■□□□□ 0.48
DDX41-212ENST00000511040 TWISTNBQ3B726 338 aaPredicted RBP18.04■□□□□ 0.48
DDX41-212ENST00000511040 SUSD4Q5VX71 490 aa18.04■□□□□ 0.48
DDX41-212ENST00000511040 TPTE2Q6XPS3 522 aa18.04■□□□□ 0.48
DDX41-212ENST00000511040 NUTM1Q86Y26 1132 aa18.04■□□□□ 0.48
DDX41-212ENST00000511040 ZNF34Q8IZ26 560 aa18.04■□□□□ 0.48
DDX41-212ENST00000511040 ZNF428Q96B54 188 aa18.04■□□□□ 0.48
DDX41-212ENST00000511040 GTF2E1P29083 439 aaPredicted RBP18.03■□□□□ 0.48
DDX41-212ENST00000511040 PDE6BP35913 854 aa18.03■□□□□ 0.48
DDX41-212ENST00000511040 EXOSC9Q06265 439 aaKnown RBP18.03■□□□□ 0.48
DDX41-212ENST00000511040 CCDC30Q5VVM6 783 aa18.03■□□□□ 0.48
DDX41-212ENST00000511040 ZNF622Q969S3 477 aaKnown RBP eCLIP18.03■□□□□ 0.484e-10■■□□□ 12.4
DDX41-212ENST00000511040 PHAXQ9H814 394 aaKnown RBP18.03■□□□□ 0.48
DDX41-212ENST00000511040 CHD4Q14839 1912 aa18.02■□□□□ 0.48
DDX41-212ENST00000511040 COL11A2P13942 1736 aaPredicted RBP18.02■□□□□ 0.48
DDX41-212ENST00000511040 GOLGA2Q08379 1002 aa18.02■□□□□ 0.48
DDX41-212ENST00000511040 ERFEQ4G0M1 354 aa18.02■□□□□ 0.48
DDX41-212ENST00000511040 ARHGAP27Q6ZUM4 889 aa18.02■□□□□ 0.48
DDX41-212ENST00000511040 PLBD2Q8NHP8 589 aa18.02■□□□□ 0.48
DDX41-212ENST00000511040 ABCC12Q96J65 1359 aa18.02■□□□□ 0.47
DDX41-212ENST00000511040 ZNF521Q96K83 1311 aa18.01■□□□□ 0.47
DDX41-212ENST00000511040 ANKRD13DQ6ZTN6 518 aa18.01■□□□□ 0.47
DDX41-212ENST00000511040 NYXQ9GZU5 481 aa18.01■□□□□ 0.47
DDX41-212ENST00000511040 MYH16Q9H6N6 1097 aa18.01■□□□□ 0.47
DDX41-212ENST00000511040 DLEC1Q9Y238 1755 aa18■□□□□ 0.47
DDX41-212ENST00000511040 TCIRG1Q13488 830 aa18■□□□□ 0.47
DDX41-212ENST00000511040 TTLL6Q8N841 843 aa18■□□□□ 0.47
DDX41-212ENST00000511040 ATP5J2-PTCD1G3V325 749 aa17.99■□□□□ 0.47
DDX41-212ENST00000511040 NTSR2O95665 410 aa17.99■□□□□ 0.47
DDX41-212ENST00000511040 PARP10Q53GL7 1025 aa17.99■□□□□ 0.47
DDX41-212ENST00000511040 HSP90AB3PQ58FF7 597 aa17.99■□□□□ 0.47
DDX41-212ENST00000511040 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
DDX41-212ENST00000511040 ZNF219Q9P2Y4 722 aaPredicted RBP17.99■□□□□ 0.47
DDX41-212ENST00000511040 UTRNP46939 3433 aa17.99■□□□□ 0.47
DDX41-212ENST00000511040 VAMP4O75379 141 aa17.98■□□□□ 0.47
DDX41-212ENST00000511040 SRGNP10124 158 aa17.98■□□□□ 0.47
DDX41-212ENST00000511040 PPP1R42Q7Z4L9 355 aa17.98■□□□□ 0.47
DDX41-212ENST00000511040 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
DDX41-212ENST00000511040 NLRP10Q86W26 655 aa17.98■□□□□ 0.47
DDX41-212ENST00000511040 UTP14AQ9BVJ6 771 aaKnown RBP17.98■□□□□ 0.47
DDX41-212ENST00000511040 PDZRN3Q9UPQ7 1066 aa17.98■□□□□ 0.47
DDX41-212ENST00000511040 TNRC6CQ9HCJ0 1690 aaKnown RBP17.98■□□□□ 0.47
DDX41-212ENST00000511040 ANKRD36CQ5JPF3 1778 aa17.98■□□□□ 0.47
DDX41-212ENST00000511040 ARFGEF1Q9Y6D6 1849 aa17.98■□□□□ 0.47
DDX41-212ENST00000511040 IBTKQ9P2D0 1353 aaPredicted RBP17.97■□□□□ 0.47
DDX41-212ENST00000511040 G2E3Q7L622 706 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms