RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 NEUROD2Q15784 382 aa27.89■■■□□ 2.06
LIN54-208ENST00000509748 CNBD1Q8NA66 436 aa27.89■■■□□ 2.06
LIN54-208ENST00000509748 ZNF652Q9Y2D9 606 aa27.89■■■□□ 2.06
LIN54-208ENST00000509748 COL11A2P13942 1736 aaPredicted RBP27.88■■■□□ 2.05
LIN54-208ENST00000509748 C9orf131Q5VYM1 1079 aa27.88■■■□□ 2.05
LIN54-208ENST00000509748 PDZRN3Q9UPQ7 1066 aa27.88■■■□□ 2.05
LIN54-208ENST00000509748 TTLL7Q6ZT98 887 aa27.86■■■□□ 2.05
LIN54-208ENST00000509748 NGEFQ8N5V2 710 aa27.86■■■□□ 2.05
LIN54-208ENST00000509748 CHL1O00533 1208 aa27.85■■■□□ 2.05
LIN54-208ENST00000509748 NBPF5PQ86XG9 351 aaPredicted RBP27.85■■■□□ 2.05
LIN54-208ENST00000509748 NIP7Q9Y221 180 aaKnown RBP eCLIP27.85■■■□□ 2.05
LIN54-208ENST00000509748 ERVV-1B6SEH8 477 aa27.84■■■□□ 2.05
LIN54-208ENST00000509748 PDIA6Q15084 440 aa27.84■■■□□ 2.05
LIN54-208ENST00000509748 LRP10Q7Z4F1 713 aa27.84■■■□□ 2.05
LIN54-208ENST00000509748 ERBB4Q15303 1308 aa27.84■■■□□ 2.05
LIN54-208ENST00000509748 NUP98P52948 1817 aa27.83■■■□□ 2.05
LIN54-208ENST00000509748 MYL6BP14649 208 aa27.83■■■□□ 2.05
LIN54-208ENST00000509748 PRELPP51888 382 aa27.83■■■□□ 2.05
LIN54-208ENST00000509748 ST5P78524 1137 aa27.83■■■□□ 2.05
LIN54-208ENST00000509748 ZNF622Q969S3 477 aaKnown RBP eCLIP27.83■■■□□ 2.05
LIN54-208ENST00000509748 MAP3K15Q6ZN16 1313 aa27.83■■■□□ 2.05
LIN54-208ENST00000509748 KIF3CO14782 793 aa27.82■■■□□ 2.04
LIN54-208ENST00000509748 SRGNP10124 158 aa27.82■■■□□ 2.04
LIN54-208ENST00000509748 RASSF7Q02833 373 aa27.82■■■□□ 2.04
LIN54-208ENST00000509748 KLRG2A4D1S0 409 aaPredicted RBP27.81■■■□□ 2.04
LIN54-208ENST00000509748 RNF181Q9P0P0 153 aa27.81■■■□□ 2.04
LIN54-208ENST00000509748 STYK1Q6J9G0 422 aa27.8■■■□□ 2.04
LIN54-208ENST00000509748 TPTE2Q6XPS3 522 aa27.8■■■□□ 2.04
LIN54-208ENST00000509748 SLX4Q8IY92 1834 aa27.79■■■□□ 2.04
LIN54-208ENST00000509748 NFKBIEO00221 500 aa27.79■■■□□ 2.04
LIN54-208ENST00000509748 NPHP1O15259 732 aa27.79■■■□□ 2.04
LIN54-208ENST00000509748 EIF2S2P20042 333 aaKnown RBP27.79■■■□□ 2.04
LIN54-208ENST00000509748 PROSER3Q2NL68 480 aa27.79■■■□□ 2.04
LIN54-208ENST00000509748 CCDC184Q52MB2 194 aa27.79■■■□□ 2.04
LIN54-208ENST00000509748 KRT24Q2M2I5 525 aa27.78■■■□□ 2.04
LIN54-208ENST00000509748 FAM177BA6PVY3 158 aa27.77■■■□□ 2.04
LIN54-208ENST00000509748 KIF6Q6ZMV9 814 aa27.77■■■□□ 2.04
LIN54-208ENST00000509748 MASTLQ96GX5 879 aa27.77■■■□□ 2.04
LIN54-208ENST00000509748 ZBTB3Q9H5J0 574 aa27.77■■■□□ 2.04
LIN54-208ENST00000509748 C21orf2O43822 256 aa27.76■■■□□ 2.03
LIN54-208ENST00000509748 ANXA1P04083 346 aa27.76■■■□□ 2.03
LIN54-208ENST00000509748 CNKSR1Q969H4 720 aa27.76■■■□□ 2.03
LIN54-208ENST00000509748 CCDC88AQ3V6T2 1871 aa27.76■■■□□ 2.03
LIN54-208ENST00000509748 FER1L6Q2WGJ9 1857 aa27.75■■■□□ 2.03
LIN54-208ENST00000509748 APAF1O14727 1248 aa27.75■■■□□ 2.03
LIN54-208ENST00000509748 LMNB1P20700 586 aa27.75■■■□□ 2.03
LIN54-208ENST00000509748 ZNF34Q8IZ26 560 aa27.75■■■□□ 2.03
LIN54-208ENST00000509748 NMRK2Q9NPI5 230 aa27.75■■■□□ 2.03
LIN54-208ENST00000509748 LAS1LQ9Y4W2 734 aaKnown RBP27.75■■■□□ 2.03
LIN54-208ENST00000509748 UBN2Q6ZU65 1347 aa27.74■■■□□ 2.03
LIN54-208ENST00000509748 ARFGEF2Q9Y6D5 1785 aa27.74■■■□□ 2.03
LIN54-208ENST00000509748 SENP3-EIF4A1A0A087X0R7 540 aa27.74■■■□□ 2.03
LIN54-208ENST00000509748 ZNF316A6NFI3 1004 aaPredicted RBP27.74■■■□□ 2.03
LIN54-208ENST00000509748 GIGYF2Q6Y7W6 1299 aaKnown RBP27.74■■■□□ 2.03
LIN54-208ENST00000509748 ZNF219Q9P2Y4 722 aaPredicted RBP27.74■■■□□ 2.03
LIN54-208ENST00000509748 PRPF40BQ6NWY9 871 aaKnown RBP27.73■■■□□ 2.03
LIN54-208ENST00000509748 C7orf43Q8WVR3 580 aa27.73■■■□□ 2.03
LIN54-208ENST00000509748 CFAP44Q96MT7 982 aa27.73■■■□□ 2.03
LIN54-208ENST00000509748 CACNA1SQ13698 1873 aa27.72■■■□□ 2.03
LIN54-208ENST00000509748 ZNF853P0CG23 659 aa27.72■■■□□ 2.03
LIN54-208ENST00000509748 NPR1P16066 1061 aa27.72■■■□□ 2.03
LIN54-208ENST00000509748 NECTIN2Q92692 538 aa27.72■■■□□ 2.03
LIN54-208ENST00000509748 GPTP24298 496 aa27.71■■■□□ 2.03
LIN54-208ENST00000509748 SUSD4Q5VX71 490 aa27.71■■■□□ 2.03
LIN54-208ENST00000509748 NUTM1Q86Y26 1132 aa27.71■■■□□ 2.03
LIN54-208ENST00000509748 ABCC12Q96J65 1359 aa27.71■■■□□ 2.03
LIN54-208ENST00000509748 NYXQ9GZU5 481 aa27.7■■■□□ 2.02
LIN54-208ENST00000509748 TNRC6CQ9HCJ0 1690 aaKnown RBP27.7■■■□□ 2.02
LIN54-208ENST00000509748 ZC3H4Q9UPT8 1303 aaKnown RBP27.69■■■□□ 2.02
LIN54-208ENST00000509748 ERFEQ4G0M1 354 aa27.69■■■□□ 2.02
LIN54-208ENST00000509748 DDX21Q9NR30 783 aaKnown RBP eCLIP27.69■■■□□ 2.02
LIN54-208ENST00000509748 MBIPQ9NS73 344 aa27.69■■■□□ 2.02
LIN54-208ENST00000509748 IBTKQ9P2D0 1353 aaPredicted RBP27.69■■■□□ 2.02
LIN54-208ENST00000509748 GTF2E1P29083 439 aaPredicted RBP27.68■■■□□ 2.02
LIN54-208ENST00000509748 CRY2Q49AN0 593 aa27.68■■■□□ 2.02
LIN54-208ENST00000509748 COPS6Q7L5N1 327 aa27.68■■■□□ 2.02
LIN54-208ENST00000509748 LTBP3Q9NS15 1303 aa27.67■■■□□ 2.02
LIN54-208ENST00000509748 NTSR2O95665 410 aa27.67■■■□□ 2.02
LIN54-208ENST00000509748 HOXB7P09629 217 aa27.67■■■□□ 2.02
LIN54-208ENST00000509748 XAGE3Q8WTP9 111 aa27.67■■■□□ 2.02
LIN54-208ENST00000509748 CEP350Q5VT06 3117 aa27.67■■■□□ 2.02
LIN54-208ENST00000509748 DICER1Q9UPY3 1922 aaKnown RBP27.66■■■□□ 2.02
LIN54-208ENST00000509748 KDM2BQ8NHM5 1336 aa27.66■■■□□ 2.02
LIN54-208ENST00000509748 CHPF2Q9P2E5 772 aa27.65■■■□□ 2.02
LIN54-208ENST00000509748 RIC1Q4ADV7 1423 aa27.65■■■□□ 2.02
LIN54-208ENST00000509748 TOMM70O94826 608 aa27.64■■■□□ 2.02
LIN54-208ENST00000509748 AIMP1Q12904 312 aaKnown RBP27.64■■■□□ 2.02
LIN54-208ENST00000509748 SOGA3Q5TF21 947 aa27.64■■■□□ 2.02
LIN54-208ENST00000509748 DUSP27Q5VZP5 1158 aa27.64■■■□□ 2.02
LIN54-208ENST00000509748 IFT57Q9NWB7 429 aa27.64■■■□□ 2.02
LIN54-208ENST00000509748 TIAM2Q8IVF5 1701 aa27.64■■■□□ 2.01
LIN54-208ENST00000509748 PARP10Q53GL7 1025 aa27.63■■■□□ 2.01
LIN54-208ENST00000509748 HDGFL1Q5TGJ6 251 aa27.63■■■□□ 2.01
LIN54-208ENST00000509748 TAOK3Q9H2K8 898 aa27.63■■■□□ 2.01
LIN54-208ENST00000509748 RRAGCQ9HB90 399 aa27.63■■■□□ 2.01
LIN54-208ENST00000509748 GLTPD2A6NH11 291 aa27.62■■■□□ 2.01
LIN54-208ENST00000509748 OLFM4Q6UX06 510 aa27.62■■■□□ 2.01
LIN54-208ENST00000509748 HSPA6P17066 643 aa27.61■■■□□ 2.01
LIN54-208ENST00000509748 ALDH1B1P30837 517 aa27.61■■■□□ 2.01
LIN54-208ENST00000509748 HOXA10P31260 410 aaPredicted RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms