RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 CHAMP1Q96JM3 812 aa21.64■■□□□ 1.06
CCHCR1-228ENST00000509552 LMTK3Q96Q04 1460 aa21.64■■□□□ 1.06
CCHCR1-228ENST00000509552 PROSER2Q86WR7 435 aaPredicted RBP21.64■■□□□ 1.05
CCHCR1-228ENST00000509552 CRYBG1Q9Y4K1 1723 aa21.64■■□□□ 1.05
CCHCR1-228ENST00000509552 RAPGEF4Q8WZA2 1011 aa21.63■■□□□ 1.05
CCHCR1-228ENST00000509552 PA2G4Q9UQ80 394 aaKnown RBP21.63■■□□□ 1.05
CCHCR1-228ENST00000509552 SPG7Q9UQ90 795 aa21.63■■□□□ 1.05
CCHCR1-228ENST00000509552 ERBB3P21860 1342 aa21.63■■□□□ 1.05
CCHCR1-228ENST00000509552 AIMP1Q12904 312 aaKnown RBP21.63■■□□□ 1.05
CCHCR1-228ENST00000509552 TRPM3Q9HCF6 1732 aaPredicted RBP21.63■■□□□ 1.05
CCHCR1-228ENST00000509552 UTYO14607 1347 aa21.62■■□□□ 1.05
CCHCR1-228ENST00000509552 PRIM1P49642 420 aaKnown RBP21.62■■□□□ 1.05
CCHCR1-228ENST00000509552 LRSAM1Q6UWE0 723 aa21.62■■□□□ 1.05
CCHCR1-228ENST00000509552 TTC14Q96N46 770 aa21.62■■□□□ 1.05
CCHCR1-228ENST00000509552 TMEM63CQ9P1W3 806 aa21.62■■□□□ 1.05
CCHCR1-228ENST00000509552 SIPA1L3O60292 1781 aaPredicted RBP21.62■■□□□ 1.05
CCHCR1-228ENST00000509552 ERBB4Q15303 1308 aa21.62■■□□□ 1.05
CCHCR1-228ENST00000509552 G3BP1Q13283 466 aaKnown RBP eCLIP21.62■■□□□ 1.05
CCHCR1-228ENST00000509552 AACSQ86V21 672 aa21.62■■□□□ 1.05
CCHCR1-228ENST00000509552 EVI5LQ96CN4 794 aa21.62■■□□□ 1.05
CCHCR1-228ENST00000509552 RBSNQ9H1K0 784 aa21.62■■□□□ 1.05
CCHCR1-228ENST00000509552 LIMCH1Q9UPQ0 1083 aa21.62■■□□□ 1.05
CCHCR1-228ENST00000509552 RASEFQ8IZ41 740 aa21.61■■□□□ 1.05
CCHCR1-228ENST00000509552 SUCLG2Q96I99 432 aa21.61■■□□□ 1.05
CCHCR1-228ENST00000509552 KIF1AQ12756 1690 aa21.61■■□□□ 1.05
CCHCR1-228ENST00000509552 AK2P54819 239 aa21.61■■□□□ 1.05
CCHCR1-228ENST00000509552 ZC3H6P61129 1189 aaKnown RBP21.61■■□□□ 1.05
CCHCR1-228ENST00000509552 RIC3Q7Z5B4 369 aa21.61■■□□□ 1.05
CCHCR1-228ENST00000509552 SYAP1Q96A49 352 aaPredicted RBP21.61■■□□□ 1.05
CCHCR1-228ENST00000509552 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.61■■□□□ 1.05
CCHCR1-228ENST00000509552 ZNF790Q6PG37 636 aa21.6■■□□□ 1.05
CCHCR1-228ENST00000509552 LARP1Q6PKG0 1096 aaKnown RBP21.6■■□□□ 1.05
CCHCR1-228ENST00000509552 BICC1Q9H694 974 aaKnown RBP21.6■■□□□ 1.05
CCHCR1-228ENST00000509552 ADAMTSL3P82987 1691 aa21.6■■□□□ 1.05
CCHCR1-228ENST00000509552 C1orf167Q5SNV9 1468 aa21.6■■□□□ 1.05
CCHCR1-228ENST00000509552 NEXNQ0ZGT2 675 aa21.6■■□□□ 1.05
CCHCR1-228ENST00000509552 NSFL1CQ9UNZ2 370 aaKnown RBP21.6■■□□□ 1.05
CCHCR1-228ENST00000509552 ADAMTS7Q9UKP4 1686 aa21.59■■□□□ 1.05
CCHCR1-228ENST00000509552 SYCE3A1L190 88 aa21.59■■□□□ 1.05
CCHCR1-228ENST00000509552 HIP1O00291 1037 aa21.59■■□□□ 1.05
CCHCR1-228ENST00000509552 PDIA6Q15084 440 aa21.59■■□□□ 1.05
CCHCR1-228ENST00000509552 C19orf44Q9H6X5 657 aa21.59■■□□□ 1.05
CCHCR1-228ENST00000509552 SLC52A2Q9HAB3 445 aa21.59■■□□□ 1.05
CCHCR1-228ENST00000509552 NLRP2Q9NX02 1062 aa21.59■■□□□ 1.05
CCHCR1-228ENST00000509552 TATP17735 454 aaPredicted RBP21.58■■□□□ 1.05
CCHCR1-228ENST00000509552 CASTP20810 708 aaKnown RBP21.58■■□□□ 1.05
CCHCR1-228ENST00000509552 MST1RQ04912 1400 aa21.58■■□□□ 1.05
CCHCR1-228ENST00000509552 RUFY3Q7L099 469 aa21.57■■□□□ 1.04
CCHCR1-228ENST00000509552 KAZALD1Q96I82 304 aa21.57■■□□□ 1.04
CCHCR1-228ENST00000509552 NPHP3Q7Z494 1330 aa21.57■■□□□ 1.04
CCHCR1-228ENST00000509552 SLC39A6Q13433 755 aa21.57■■□□□ 1.04
CCHCR1-228ENST00000509552 NAP1L5Q96NT1 182 aaPredicted RBP21.57■■□□□ 1.04
CCHCR1-228ENST00000509552 SASH1O94885 1247 aa21.56■■□□□ 1.04
CCHCR1-228ENST00000509552 RGPD5Q99666 1765 aa21.56■■□□□ 1.04
CCHCR1-228ENST00000509552 PTH1RQ03431 593 aa21.56■■□□□ 1.04
CCHCR1-228ENST00000509552 PRPF40BQ6NWY9 871 aaKnown RBP21.56■■□□□ 1.04
CCHCR1-228ENST00000509552 ZSCAN30Q86W11 494 aa21.56■■□□□ 1.04
CCHCR1-228ENST00000509552 TM6SF1Q9BZW5 370 aa21.56■■□□□ 1.04
CCHCR1-228ENST00000509552 SMC3Q9UQE7 1217 aa21.56■■□□□ 1.04
CCHCR1-228ENST00000509552 IGKV5-2P06315 115 aa21.55■■□□□ 1.04
CCHCR1-228ENST00000509552 MYL6BP14649 208 aa21.55■■□□□ 1.04
CCHCR1-228ENST00000509552 ZKSCAN1P17029 563 aaPredicted RBP21.55■■□□□ 1.04
CCHCR1-228ENST00000509552 FOXD4L6Q3SYB3 417 aaPredicted RBP21.55■■□□□ 1.04
CCHCR1-228ENST00000509552 VPS53Q5VIR6 699 aa21.55■■□□□ 1.04
CCHCR1-228ENST00000509552 FOXD4L3Q6VB84 417 aaPredicted RBP21.55■■□□□ 1.04
CCHCR1-228ENST00000509552 JAKMIP1Q96N16 626 aaKnown RBP21.55■■□□□ 1.04
CCHCR1-228ENST00000509552 RPAP1Q9BWH6 1393 aaPredicted RBP21.55■■□□□ 1.04
CCHCR1-228ENST00000509552 PHKG2P15735 406 aa21.55■■□□□ 1.04
CCHCR1-228ENST00000509552 EAF2Q96CJ1 260 aaPredicted RBP21.55■■□□□ 1.04
CCHCR1-228ENST00000509552 PDRG1Q9NUG6 133 aa21.55■■□□□ 1.04
CCHCR1-228ENST00000509552 CYP46A1Q9Y6A2 500 aa21.55■■□□□ 1.04
CCHCR1-228ENST00000509552 PHF14O94880 888 aa21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 ZSCAN22P10073 491 aaPredicted RBP21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 HS1BP3Q53T59 392 aa21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 USP48Q86UV5 1035 aa21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 NFATC2IPQ8NCF5 419 aa21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 KCNB2Q92953 911 aa21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 ZSCAN31Q96LW9 406 aaPredicted RBP21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 CCDC171Q6TFL3 1326 aa21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 NEURL1BA8MQ27 555 aa21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 IFNL2Q8IZJ0 200 aa21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 XAGE3Q8WTP9 111 aa21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 CCDC8Q9H0W5 538 aaPredicted RBP21.54■■□□□ 1.04
CCHCR1-228ENST00000509552 KDM6AO15550 1401 aaPredicted RBP21.53■■□□□ 1.04
CCHCR1-228ENST00000509552 STX6O43752 255 aa21.53■■□□□ 1.04
CCHCR1-228ENST00000509552 KCNJ4P48050 445 aa21.53■■□□□ 1.04
CCHCR1-228ENST00000509552 ZSWIM6Q9HCJ5 1215 aa21.53■■□□□ 1.04
CCHCR1-228ENST00000509552 ATP6V1DQ9Y5K8 247 aa21.53■■□□□ 1.04
CCHCR1-228ENST00000509552 MSNP26038 577 aaKnown RBP21.52■■□□□ 1.04
CCHCR1-228ENST00000509552 GCKRQ14397 625 aa21.52■■□□□ 1.04
CCHCR1-228ENST00000509552 COPS6Q7L5N1 327 aa21.52■■□□□ 1.04
CCHCR1-228ENST00000509552 LARP6Q9BRS8 491 aaKnown RBP21.52■■□□□ 1.04
CCHCR1-228ENST00000509552 METTL22Q9BUU2 404 aaPredicted RBP21.52■■□□□ 1.04
CCHCR1-228ENST00000509552 SIL1Q9H173 461 aa21.52■■□□□ 1.04
CCHCR1-228ENST00000509552 GDPD2Q9HCC8 539 aa21.52■■□□□ 1.04
CCHCR1-228ENST00000509552 SH2B1Q9NRF2 756 aaPredicted RBP21.52■■□□□ 1.04
CCHCR1-228ENST00000509552 CSB-PGBD3P0DP91 1061 aa21.52■■□□□ 1.04
CCHCR1-228ENST00000509552 CPA1P15085 419 aa21.52■■□□□ 1.04
CCHCR1-228ENST00000509552 NECTIN1Q15223 517 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms