RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 ANP32EQ9BTT0 268 aa3.39□□□□□ -1.87
CAST-226ENST00000509529 NIFKQ9BYG3 293 aaKnown RBP3.39□□□□□ -1.87
CAST-226ENST00000509529 FZD5Q13467 585 aa3.39□□□□□ -1.87
CAST-226ENST00000509529 TRAPPC3LQ5T215 181 aa3.39□□□□□ -1.87
CAST-226ENST00000509529 LENG1Q96BZ8 264 aaPredicted RBP3.39□□□□□ -1.87
CAST-226ENST00000509529 PCMTD2Q9NV79 361 aa3.39□□□□□ -1.87
CAST-226ENST00000509529 SAMD5Q5TGI4 173 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 ZNF592Q92610 1267 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 TNFRSF25Q93038 417 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 SHROOM4Q9ULL8 1493 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 A0A0A0MRY4 1105 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 GPR37L1O60883 481 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 ADH7P40394 386 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 SCNN1DP51172 638 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 LAMC2Q13753 1193 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 NBPF1Q3BBV0 1214 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 C20orf204Q6ZNR8 217 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 GJA3Q9Y6H8 435 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 TSGA10IPQ3SY00 556 aa3.38□□□□□ -1.87
CAST-226ENST00000509529 ZNF330Q9Y3S2 320 aaPredicted RBP3.38□□□□□ -1.87
CAST-226ENST00000509529 TATP17735 454 aaPredicted RBP3.37□□□□□ -1.87
CAST-226ENST00000509529 SLC30A3Q99726 388 aa3.37□□□□□ -1.87
CAST-226ENST00000509529 FAM117AQ9C073 453 aa3.37□□□□□ -1.87
CAST-226ENST00000509529 ZDHHC3Q9NYG2 299 aa3.37□□□□□ -1.87
CAST-226ENST00000509529 CEP126Q9P2H0 1117 aa3.37□□□□□ -1.87
CAST-226ENST00000509529 ABCC9O60706 1549 aa3.37□□□□□ -1.87
CAST-226ENST00000509529 IRAK1P51617 712 aa3.37□□□□□ -1.87
CAST-226ENST00000509529 RAB44Q7Z6P3 723 aaPredicted RBP3.37□□□□□ -1.87
CAST-226ENST00000509529 USP3Q9Y6I4 520 aa3.37□□□□□ -1.87
CAST-226ENST00000509529 INHAP05111 366 aa3.36□□□□□ -1.87
CAST-226ENST00000509529 GDF10P55107 478 aa3.36□□□□□ -1.87
CAST-226ENST00000509529 PCGF6Q9BYE7 350 aa3.36□□□□□ -1.87
CAST-226ENST00000509529 USP21Q9UK80 565 aa3.36□□□□□ -1.87
CAST-226ENST00000509529 TAL1P17542 331 aaPredicted RBP3.36□□□□□ -1.87
CAST-226ENST00000509529 SSTR4P31391 388 aa3.36□□□□□ -1.87
CAST-226ENST00000509529 NEUROD1Q13562 356 aa3.36□□□□□ -1.87
CAST-226ENST00000509529 ERICH6BQ5W0A0 696 aa3.36□□□□□ -1.87
CAST-226ENST00000509529 BICDL1Q6ZP65 573 aa3.36□□□□□ -1.87
CAST-226ENST00000509529 IQSEC3Q9UPP2 1182 aaPredicted RBP3.36□□□□□ -1.87
CAST-226ENST00000509529 RNF114Q9Y508 228 aa3.36□□□□□ -1.87
CAST-226ENST00000509529 LILRB5O75023 590 aa3.35□□□□□ -1.87
CAST-226ENST00000509529 SMTNP53814 917 aa3.35□□□□□ -1.87
CAST-226ENST00000509529 USP4Q13107 963 aa3.35□□□□□ -1.87
CAST-226ENST00000509529 DOLKQ9UPQ8 538 aa3.35□□□□□ -1.87
CAST-226ENST00000509529 RAC1P63000 192 aa3.35□□□□□ -1.87
CAST-226ENST00000509529 SFSWAPQ12872 951 aaKnown RBP3.35□□□□□ -1.87
CAST-226ENST00000509529 DDRGK1Q96HY6 314 aa3.35□□□□□ -1.87
CAST-226ENST00000509529 CD97P48960 835 aa3.35□□□□□ -1.87
CAST-226ENST00000509529 GPBP1L1Q9HC44 474 aaPredicted RBP3.35□□□□□ -1.87
CAST-226ENST00000509529 PARP3Q9Y6F1 533 aa3.35□□□□□ -1.87
CAST-226ENST00000509529 OAS3Q9Y6K5 1087 aaKnown RBP3.35□□□□□ -1.87
CAST-226ENST00000509529 TXLNAP40222 546 aa3.34□□□□□ -1.87
CAST-226ENST00000509529 SPEM2Q0P670 501 aa3.34□□□□□ -1.87
CAST-226ENST00000509529 OXLD1Q5BKU9 147 aa3.34□□□□□ -1.87
CAST-226ENST00000509529 FAM9AQ8IZU1 332 aaPredicted RBP3.34□□□□□ -1.87
CAST-226ENST00000509529 FMR1NBQ8N0W7 255 aaPredicted RBP3.34□□□□□ -1.87
CAST-226ENST00000509529 TMEM259Q4ZIN3 620 aa3.34□□□□□ -1.88
CAST-226ENST00000509529 LRRC69Q6ZNQ3 347 aa3.34□□□□□ -1.88
CAST-226ENST00000509529 KDM4CQ9H3R0 1056 aa3.34□□□□□ -1.88
CAST-226ENST00000509529 CABP1Q9NZU7 370 aa3.34□□□□□ -1.88
CAST-226ENST00000509529 SERTAD1Q9UHV2 236 aa3.34□□□□□ -1.88
CAST-226ENST00000509529 EIF4G1Q04637 1599 aaKnown RBP3.34□□□□□ -1.88
CAST-226ENST00000509529 WFDC12Q8WWY7 111 aa3.33□□□□□ -1.88
CAST-226ENST00000509529 JPH1Q9HDC5 661 aaPredicted RBP3.33□□□□□ -1.88
CAST-226ENST00000509529 NOS3P29474 1203 aa3.33□□□□□ -1.88
CAST-226ENST00000509529 IREB2P48200 963 aaKnown RBP3.33□□□□□ -1.88
CAST-226ENST00000509529 MTFR1Q15390 333 aa3.33□□□□□ -1.88
CAST-226ENST00000509529 PRR23CQ6ZRP0 262 aa3.33□□□□□ -1.88
CAST-226ENST00000509529 PHTF2Q8N3S3 785 aa3.33□□□□□ -1.88
CAST-226ENST00000509529 NUDT8Q8WV74 236 aa3.33□□□□□ -1.88
CAST-226ENST00000509529 MEGF10Q96KG7 1140 aa3.33□□□□□ -1.88
CAST-226ENST00000509529 A6NJY4 79 aa3.33□□□□□ -1.88
CAST-226ENST00000509529 GTF3C3Q9Y5Q9 886 aa3.33□□□□□ -1.88
CAST-226ENST00000509529 TMEM229AB2RXF0 380 aa3.32□□□□□ -1.88
CAST-226ENST00000509529 CDK2AP1O14519 115 aa3.32□□□□□ -1.88
CAST-226ENST00000509529 AFF1P51825 1210 aaKnown RBP3.32□□□□□ -1.88
CAST-226ENST00000509529 GP2P55259 537 aaKnown RBP3.32□□□□□ -1.88
CAST-226ENST00000509529 SLC24A1O60721 1099 aa3.32□□□□□ -1.88
CAST-226ENST00000509529 MED26O95402 600 aa3.32□□□□□ -1.88
CAST-226ENST00000509529 JAG1P78504 1218 aa3.32□□□□□ -1.88
CAST-226ENST00000509529 ILDR2Q71H61 639 aa3.32□□□□□ -1.88
CAST-226ENST00000509529 DMRTC2Q8IXT2 367 aaPredicted RBP3.32□□□□□ -1.88
CAST-226ENST00000509529 ZDHHC1Q8WTX9 485 aa3.32□□□□□ -1.88
CAST-226ENST00000509529 SLC4A9Q96Q91 983 aa3.32□□□□□ -1.88
CAST-226ENST00000509529 FSTP19883 344 aa3.31□□□□□ -1.88
CAST-226ENST00000509529 TBC1D8BQ0IIM8 1120 aa3.31□□□□□ -1.88
CAST-226ENST00000509529 RB1CC1Q8TDY2 1594 aa3.31□□□□□ -1.88
CAST-226ENST00000509529 NAGPAQ9UK23 515 aa3.31□□□□□ -1.88
CAST-226ENST00000509529 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
CAST-226ENST00000509529 SIRT1Q96EB6 747 aa3.3□□□□□ -1.88
CAST-226ENST00000509529 CHIC2Q9UKJ5 165 aa3.3□□□□□ -1.88
CAST-226ENST00000509529 SLC6A14Q9UN76 642 aa3.3□□□□□ -1.88
CAST-226ENST00000509529 KIAA1324LA8MWY0 1029 aaPredicted RBP3.3□□□□□ -1.88
CAST-226ENST00000509529 EML1O00423 815 aa3.3□□□□□ -1.88
CAST-226ENST00000509529 SLFNL1Q499Z3 407 aa3.3□□□□□ -1.88
CAST-226ENST00000509529 UBE2Q2Q8WVN8 375 aa3.3□□□□□ -1.88
CAST-226ENST00000509529 C7orf43Q8WVR3 580 aa3.3□□□□□ -1.88
CAST-226ENST00000509529 L3MBTL2Q969R5 705 aa3.3□□□□□ -1.88
CAST-226ENST00000509529 UBE2OQ9C0C9 1292 aaKnown RBP3.3□□□□□ -1.88
CAST-226ENST00000509529 BRD7Q9NPI1 651 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms