RNA–Protein interactions for RNA: ENST00000509148.1

RACK1-221, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-221	ENST00000509148	TPTE2	Q6XPS3	522 aa		13.12	□□□□□ -0.31
RACK1-221	ENST00000509148	CNKSR1	Q969H4	720 aa		13.12	□□□□□ -0.31
RACK1-221	ENST00000509148	THUMPD2	Q9BTF0	503 aa	Known RBP	13.12	□□□□□ -0.31
RACK1-221	ENST00000509148	BABAM1	Q9NWV8	329 aa		13.12	□□□□□ -0.31
RACK1-221	ENST00000509148	AFDN	P55196	1824 aa	Known RBP	13.11	□□□□□ -0.31
RACK1-221	ENST00000509148	NPM3	O75607	178 aa	Known RBP	13.11	□□□□□ -0.31
RACK1-221	ENST00000509148	TOMM70	O94826	608 aa		13.11	□□□□□ -0.31
RACK1-221	ENST00000509148	HSPA6	P17066	643 aa		13.11	□□□□□ -0.31
RACK1-221	ENST00000509148	WDR43	Q15061	677 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
RACK1-221	ENST00000509148	STYK1	Q6J9G0	422 aa		13.11	□□□□□ -0.31
RACK1-221	ENST00000509148	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.11	□□□□□ -0.31
RACK1-221	ENST00000509148	CCDC24	Q8N4L8	307 aa		13.11	□□□□□ -0.31
RACK1-221	ENST00000509148	TSPYL4	Q9UJ04	414 aa		13.11	□□□□□ -0.31
RACK1-221	ENST00000509148	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
RACK1-221	ENST00000509148	ERVV-1	B6SEH8	477 aa		13.1	□□□□□ -0.31
RACK1-221	ENST00000509148	SRGN	P10124	158 aa		13.1	□□□□□ -0.31
RACK1-221	ENST00000509148	TMPO	P42166	694 aa	Known RBP	13.1	□□□□□ -0.31
RACK1-221	ENST00000509148	RASSF7	Q02833	373 aa		13.1	□□□□□ -0.31
RACK1-221	ENST00000509148	SOGA3	Q5TF21	947 aa		13.1	□□□□□ -0.31
RACK1-221	ENST00000509148	KIF6	Q6ZMV9	814 aa		13.1	□□□□□ -0.31
RACK1-221	ENST00000509148	MASTL	Q96GX5	879 aa		13.1	□□□□□ -0.31
RACK1-221	ENST00000509148	NMRK2	Q9NPI5	230 aa		13.1	□□□□□ -0.31
RACK1-221	ENST00000509148	ERBB4	Q15303	1308 aa		13.1	□□□□□ -0.31
RACK1-221	ENST00000509148	C21orf2	O43822	256 aa		13.09	□□□□□ -0.31
RACK1-221	ENST00000509148	GTF2E1	P29083	439 aa	Predicted RBP	13.09	□□□□□ -0.31
RACK1-221	ENST00000509148	NGEF	Q8N5V2	710 aa		13.09	□□□□□ -0.31
RACK1-221	ENST00000509148	RRP7A	Q9Y3A4	280 aa	Known RBP	13.09	□□□□□ -0.31
RACK1-221	ENST00000509148	HLF	Q16534	295 aa		13.08	□□□□□ -0.32
RACK1-221	ENST00000509148	RUNDC1	Q96C34	613 aa		13.08	□□□□□ -0.32
RACK1-221	ENST00000509148	NYX	Q9GZU5	481 aa		13.08	□□□□□ -0.32
RACK1-221	ENST00000509148	MAP3K15	Q6ZN16	1313 aa		13.08	□□□□□ -0.32
RACK1-221	ENST00000509148	NFKBIE	O00221	500 aa		13.07	□□□□□ -0.32
RACK1-221	ENST00000509148	MYL6B	P14649	208 aa		13.07	□□□□□ -0.32
RACK1-221	ENST00000509148	NPR1	P16066	1061 aa		13.07	□□□□□ -0.32
RACK1-221	ENST00000509148	PRPF40B	Q6NWY9	871 aa	Known RBP	13.07	□□□□□ -0.32
RACK1-221	ENST00000509148	RBM46	Q8TBY0	533 aa	Known RBP	13.07	□□□□□ -0.32
RACK1-221	ENST00000509148	RNF216	Q9NWF9	866 aa	Predicted RBP	13.07	□□□□□ -0.32
RACK1-221	ENST00000509148	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.07	□□□□□ -0.32
RACK1-221	ENST00000509148	BCOR	Q6W2J9	1755 aa		13.07	□□□□□ -0.32
RACK1-221	ENST00000509148	CEP350	Q5VT06	3117 aa		13.06	□□□□□ -0.32
RACK1-221	ENST00000509148	KLRG2	A4D1S0	409 aa	Predicted RBP	13.06	□□□□□ -0.32
RACK1-221	ENST00000509148	GLTPD2	A6NH11	291 aa		13.06	□□□□□ -0.32
RACK1-221	ENST00000509148	FAM177B	A6PVY3	158 aa		13.06	□□□□□ -0.32
RACK1-221	ENST00000509148	NEUROD2	Q15784	382 aa		13.06	□□□□□ -0.32
RACK1-221	ENST00000509148	DPY19L2	Q6NUT2	758 aa		13.06	□□□□□ -0.32
RACK1-221	ENST00000509148	CCDC146	Q8IYE0	955 aa		13.06	□□□□□ -0.32
RACK1-221	ENST00000509148	TAOK3	Q9H2K8	898 aa		13.06	□□□□□ -0.32
RACK1-221	ENST00000509148	RRAGC	Q9HB90	399 aa		13.06	□□□□□ -0.32
RACK1-221	ENST00000509148	DLEC1	Q9Y238	1755 aa		13.06	□□□□□ -0.32
RACK1-221	ENST00000509148	LTBP3	Q9NS15	1303 aa		13.06	□□□□□ -0.32
RACK1-221	ENST00000509148	KDM3B	Q7LBC6	1761 aa		13.05	□□□□□ -0.32
RACK1-221	ENST00000509148	EIF2S2	P20042	333 aa	Known RBP	13.05	□□□□□ -0.32
RACK1-221	ENST00000509148	ALDH1B1	P30837	517 aa		13.05	□□□□□ -0.32
RACK1-221	ENST00000509148	APLP1	P51693	650 aa		13.05	□□□□□ -0.32
RACK1-221	ENST00000509148	ERFE	Q4G0M1	354 aa		13.05	□□□□□ -0.32
RACK1-221	ENST00000509148	TTLL7	Q6ZT98	887 aa		13.05	□□□□□ -0.32
RACK1-221	ENST00000509148	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.05	□□□□□ -0.32
RACK1-221	ENST00000509148	DLG5	Q8TDM6	1919 aa		13.05	□□□□□ -0.32
RACK1-221	ENST00000509148	LAMB4	A4D0S4	1761 aa		13.04	□□□□□ -0.32
RACK1-221	ENST00000509148	VEGFA	P15692	232 aa	Predicted RBP	13.04	□□□□□ -0.32
RACK1-221	ENST00000509148	PRELP	P51888	382 aa		13.04	□□□□□ -0.32
RACK1-221	ENST00000509148	FSTL1	Q12841	308 aa		13.04	□□□□□ -0.32
RACK1-221	ENST00000509148	CCDC93	Q567U6	631 aa		13.04	□□□□□ -0.32
RACK1-221	ENST00000509148	ZBTB3	Q9H5J0	574 aa		13.04	□□□□□ -0.32
RACK1-221	ENST00000509148	ADAMTS8	Q9UP79	889 aa		13.04	□□□□□ -0.32
RACK1-221	ENST00000509148	ANKRD31	Q8N7Z5	1873 aa		13.04	□□□□□ -0.32
RACK1-221	ENST00000509148	CHL1	O00533	1208 aa		13.03	□□□□□ -0.32
RACK1-221	ENST00000509148	ZEB1	P37275	1124 aa	Predicted RBP	13.03	□□□□□ -0.32
RACK1-221	ENST00000509148	PARP10	Q53GL7	1025 aa		13.03	□□□□□ -0.32
RACK1-221	ENST00000509148	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.03	□□□□□ -0.32
RACK1-221	ENST00000509148	PPP1R42	Q7Z4L9	355 aa		13.03	□□□□□ -0.32
RACK1-221	ENST00000509148	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.03	□□□□□ -0.32
RACK1-221	ENST00000509148	GPT	P24298	496 aa		13.02	□□□□□ -0.33
RACK1-221	ENST00000509148	RTKN2	Q8IZC4	609 aa		13.02	□□□□□ -0.33
RACK1-221	ENST00000509148	C7orf43	Q8WVR3	580 aa		13.02	□□□□□ -0.33
RACK1-221	ENST00000509148	TRIM35	Q9UPQ4	493 aa		13.02	□□□□□ -0.33
RACK1-221	ENST00000509148	LAS1L	Q9Y4W2	734 aa	Known RBP	13.02	□□□□□ -0.33
RACK1-221	ENST00000509148	HOXD11	P31277	338 aa	Predicted RBP	13.01	□□□□□ -0.33
RACK1-221	ENST00000509148	PDIA6	Q15084	440 aa		13.01	□□□□□ -0.33
RACK1-221	ENST00000509148	CRY2	Q49AN0	593 aa		13.01	□□□□□ -0.33
RACK1-221	ENST00000509148	HSP90AB3P	Q58FF7	597 aa		13.01	□□□□□ -0.33
RACK1-221	ENST00000509148	NUTM1	Q86Y26	1132 aa		13.01	□□□□□ -0.33
RACK1-221	ENST00000509148	ZNF34	Q8IZ26	560 aa		13.01	□□□□□ -0.33
RACK1-221	ENST00000509148	SMC1B	Q8NDV3	1235 aa		13.01	□□□□□ -0.33
RACK1-221	ENST00000509148	RPGR	Q92834	1020 aa	Known RBP	13.01	□□□□□ -0.33
RACK1-221	ENST00000509148	SBF1	O95248	1867 aa		13.01	□□□□□ -0.33
RACK1-221	ENST00000509148	COL11A2	P13942	1736 aa	Predicted RBP	13	□□□□□ -0.33
RACK1-221	ENST00000509148	UBN2	Q6ZU65	1347 aa		13	□□□□□ -0.33
RACK1-221	ENST00000509148	HOXB7	P09629	217 aa		13	□□□□□ -0.33
RACK1-221	ENST00000509148	FKBP4	Q02790	459 aa	Known RBP eCLIP	13	□□□□□ -0.33
RACK1-221	ENST00000509148	CALD1	Q05682	793 aa	Known RBP	13	□□□□□ -0.33
RACK1-221	ENST00000509148	SUSD4	Q5VX71	490 aa		13	□□□□□ -0.33
RACK1-221	ENST00000509148	CC2D2B	Q6DHV5	1058 aa		13	□□□□□ -0.33
RACK1-221	ENST00000509148	LRP10	Q7Z4F1	713 aa		13	□□□□□ -0.33
RACK1-221	ENST00000509148	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13	□□□□□ -0.33
RACK1-221	ENST00000509148	RIC1	Q4ADV7	1423 aa		12.99	□□□□□ -0.33
RACK1-221	ENST00000509148	GRIPAP1	Q4V328	841 aa		12.99	□□□□□ -0.33
RACK1-221	ENST00000509148	COPS6	Q7L5N1	327 aa		12.99	□□□□□ -0.33
RACK1-221	ENST00000509148	NECTIN2	Q92692	538 aa		12.99	□□□□□ -0.33
RACK1-221	ENST00000509148	CFAP44	Q96MT7	982 aa		12.99	□□□□□ -0.33

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