RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 PRIM1P49642 420 aaKnown RBP13.27□□□□□ -0.28
SEC31A-228ENST00000509142 NAP1L5Q96NT1 182 aaPredicted RBP13.27□□□□□ -0.28
SEC31A-228ENST00000509142 CWC27Q6UX04 472 aaKnown RBP13.27□□□□□ -0.29
SEC31A-228ENST00000509142 SLC52A2Q9HAB3 445 aa13.27□□□□□ -0.29
SEC31A-228ENST00000509142 TMEM63CQ9P1W3 806 aa13.27□□□□□ -0.29
SEC31A-228ENST00000509142 ADAMTSL3P82987 1691 aa13.27□□□□□ -0.29
SEC31A-228ENST00000509142 LARP1Q6PKG0 1096 aaKnown RBP13.27□□□□□ -0.29
SEC31A-228ENST00000509142 CADPS2Q86UW7 1296 aa13.27□□□□□ -0.29
SEC31A-228ENST00000509142 NPHP3Q7Z494 1330 aa13.27□□□□□ -0.29
SEC31A-228ENST00000509142 PI4K2BQ8TCG2 481 aa13.26□□□□□ -0.29
SEC31A-228ENST00000509142 AACSQ86V21 672 aa13.26□□□□□ -0.29
SEC31A-228ENST00000509142 SLIT3O75094 1523 aa13.26□□□□□ -0.29
SEC31A-228ENST00000509142 PHKG2P15735 406 aa13.26□□□□□ -0.29
SEC31A-228ENST00000509142 RUFY2Q8WXA3 655 aa13.26□□□□□ -0.29
SEC31A-228ENST00000509142 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
SEC31A-228ENST00000509142 SIL1Q9H173 461 aa13.25□□□□□ -0.29
SEC31A-228ENST00000509142 ECHDC1Q9NTX5 307 aa13.25□□□□□ -0.29
SEC31A-228ENST00000509142 TTC41PQ6P2S7 1318 aa13.25□□□□□ -0.29
SEC31A-228ENST00000509142 MTX1Q13505 466 aa13.25□□□□□ -0.29
SEC31A-228ENST00000509142 COPS6Q7L5N1 327 aa13.25□□□□□ -0.29
SEC31A-228ENST00000509142 SUCLG2Q96I99 432 aa13.25□□□□□ -0.29
SEC31A-228ENST00000509142 MED1Q15648 1581 aaPredicted RBP13.25□□□□□ -0.29
SEC31A-228ENST00000509142 MYD88Q99836 296 aa13.24□□□□□ -0.29
SEC31A-228ENST00000509142 BICC1Q9H694 974 aaKnown RBP13.24□□□□□ -0.29
SEC31A-228ENST00000509142 SGSM2O43147 1006 aa13.24□□□□□ -0.29
SEC31A-228ENST00000509142 CABP4P57796 275 aa13.24□□□□□ -0.29
SEC31A-228ENST00000509142 ZNF496Q96IT1 587 aaPredicted RBP13.24□□□□□ -0.29
SEC31A-228ENST00000509142 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.24□□□□□ -0.29
SEC31A-228ENST00000509142 OVOS2A0A0G2JMS6 1433 aa13.24□□□□□ -0.29
SEC31A-228ENST00000509142 CCDC173Q0VFZ6 552 aa13.24□□□□□ -0.29
SEC31A-228ENST00000509142 CUL4AQ13619 759 aa13.24□□□□□ -0.29
SEC31A-228ENST00000509142 N4BP2Q86UW6 1770 aaPredicted RBP13.24□□□□□ -0.29
SEC31A-228ENST00000509142 SNRPA1P09661 255 aaKnown RBP13.23□□□□□ -0.29
SEC31A-228ENST00000509142 LMO7Q8WWI1 1683 aa13.23□□□□□ -0.29
SEC31A-228ENST00000509142 KCNJ4P48050 445 aa13.23□□□□□ -0.29
SEC31A-228ENST00000509142 PIP4K2AP48426 406 aaPredicted RBP13.23□□□□□ -0.29
SEC31A-228ENST00000509142 TRIM44Q96DX7 344 aaPredicted RBP13.23□□□□□ -0.29
SEC31A-228ENST00000509142 HSPA4P34932 840 aa13.23□□□□□ -0.29
SEC31A-228ENST00000509142 DCAF5Q96JK2 942 aa13.23□□□□□ -0.29
SEC31A-228ENST00000509142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.23□□□□□ -0.292e-13■■□□□ 13.3
SEC31A-228ENST00000509142 BRD1O95696 1058 aa13.22□□□□□ -0.29
SEC31A-228ENST00000509142 CCDC8Q9H0W5 538 aaPredicted RBP13.22□□□□□ -0.29
SEC31A-228ENST00000509142 KDM3BQ7LBC6 1761 aa13.22□□□□□ -0.29
SEC31A-228ENST00000509142 EPB41L2O43491 1005 aaKnown RBP13.22□□□□□ -0.29
SEC31A-228ENST00000509142 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
SEC31A-228ENST00000509142 ANP32BQ92688 251 aaKnown RBP13.22□□□□□ -0.29
SEC31A-228ENST00000509142 FMNL2Q96PY5 1086 aa13.22□□□□□ -0.29
SEC31A-228ENST00000509142 HEG1Q9ULI3 1381 aa13.22□□□□□ -0.29
SEC31A-228ENST00000509142 USP16Q9Y5T5 823 aa13.22□□□□□ -0.29
SEC31A-228ENST00000509142 HSPA2P54652 639 aa13.21□□□□□ -0.29
SEC31A-228ENST00000509142 PDIA6Q15084 440 aa13.21□□□□□ -0.29
SEC31A-228ENST00000509142 PDLIM2Q96JY6 352 aa13.21□□□□□ -0.29
SEC31A-228ENST00000509142 PHRF1Q9P1Y6 1649 aaKnown RBP13.21□□□□□ -0.29
SEC31A-228ENST00000509142 RAD50Q92878 1312 aa13.21□□□□□ -0.29
SEC31A-228ENST00000509142 IL17RAQ96F46 866 aa13.21□□□□□ -0.29
SEC31A-228ENST00000509142 SYCE3A1L190 88 aa13.21□□□□□ -0.3
SEC31A-228ENST00000509142 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.3
SEC31A-228ENST00000509142 EVI5LQ96CN4 794 aa13.2□□□□□ -0.3
SEC31A-228ENST00000509142 METTL22Q9BUU2 404 aaPredicted RBP13.2□□□□□ -0.3
SEC31A-228ENST00000509142 PRDM11Q9NQV5 511 aa13.2□□□□□ -0.3
SEC31A-228ENST00000509142 NEURL1BA8MQ27 555 aa13.2□□□□□ -0.3
SEC31A-228ENST00000509142 DTNBO60941 627 aa13.2□□□□□ -0.3
SEC31A-228ENST00000509142 IGKV5-2P06315 115 aa13.2□□□□□ -0.3
SEC31A-228ENST00000509142 MST1RQ04912 1400 aa13.2□□□□□ -0.3
SEC31A-228ENST00000509142 FOXD4L6Q3SYB3 417 aaPredicted RBP13.2□□□□□ -0.3
SEC31A-228ENST00000509142 FOXD4L3Q6VB84 417 aaPredicted RBP13.2□□□□□ -0.3
SEC31A-228ENST00000509142 CYP27B1O15528 508 aa13.2□□□□□ -0.3
SEC31A-228ENST00000509142 GCKRQ14397 625 aa13.2□□□□□ -0.3
SEC31A-228ENST00000509142 TOM1L2Q6ZVM7 507 aa13.2□□□□□ -0.3
SEC31A-228ENST00000509142 INTS4Q96HW7 963 aaKnown RBP13.2□□□□□ -0.3
SEC31A-228ENST00000509142 KLHDC4Q8TBB5 520 aa13.19□□□□□ -0.3
SEC31A-228ENST00000509142 SNX14Q9Y5W7 946 aa13.19□□□□□ -0.3
SEC31A-228ENST00000509142 KIF1AQ12756 1690 aa13.19□□□□□ -0.3
SEC31A-228ENST00000509142 LSG1Q9H089 658 aaKnown RBP13.19□□□□□ -0.3
SEC31A-228ENST00000509142 BOLA2Q9H3K6 86 aa13.19□□□□□ -0.3
SEC31A-228ENST00000509142 GDPD2Q9HCC8 539 aa13.19□□□□□ -0.3
SEC31A-228ENST00000509142 GADD45BO75293 160 aaPredicted RBP13.19□□□□□ -0.3
SEC31A-228ENST00000509142 ZSCAN30Q86W11 494 aa13.19□□□□□ -0.3
SEC31A-228ENST00000509142 UBE2Q2Q8WVN8 375 aa13.19□□□□□ -0.3
SEC31A-228ENST00000509142 ATP5J2-PTCD1G3V325 749 aa13.18□□□□□ -0.3
SEC31A-228ENST00000509142 PTCD1O75127 700 aaKnown RBP13.18□□□□□ -0.3
SEC31A-228ENST00000509142 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
SEC31A-228ENST00000509142 LARP6Q9BRS8 491 aaKnown RBP13.18□□□□□ -0.3
SEC31A-228ENST00000509142 FSD1Q9BTV5 496 aa13.18□□□□□ -0.3
SEC31A-228ENST00000509142 CHMP3Q9Y3E7 222 aa13.18□□□□□ -0.3
SEC31A-228ENST00000509142 USP42Q9H9J4 1324 aaKnown RBP13.18□□□□□ -0.3
SEC31A-228ENST00000509142 SASH1O94885 1247 aa13.18□□□□□ -0.3
SEC31A-228ENST00000509142 ZKSCAN1P17029 563 aaPredicted RBP13.18□□□□□ -0.3
SEC31A-228ENST00000509142 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
SEC31A-228ENST00000509142 KAZALD1Q96I82 304 aa13.18□□□□□ -0.3
SEC31A-228ENST00000509142 KDM6AO15550 1401 aaPredicted RBP13.18□□□□□ -0.3
SEC31A-228ENST00000509142 HIP1O00291 1037 aa13.18□□□□□ -0.3
SEC31A-228ENST00000509142 PRPF40BQ6NWY9 871 aaKnown RBP13.18□□□□□ -0.3
SEC31A-228ENST00000509142 LRSAM1Q6UWE0 723 aa13.18□□□□□ -0.3
SEC31A-228ENST00000509142 UBE3BQ7Z3V4 1068 aa13.18□□□□□ -0.3
SEC31A-228ENST00000509142 SPATA31A3Q5VYP0 1347 aa13.18□□□□□ -0.3
SEC31A-228ENST00000509142 RASEFQ8IZ41 740 aa13.17□□□□□ -0.3
SEC31A-228ENST00000509142 TRPM3Q9HCF6 1732 aaPredicted RBP13.17□□□□□ -0.3
SEC31A-228ENST00000509142 MEGF6O75095 1541 aa13.17□□□□□ -0.3
SEC31A-228ENST00000509142 TCHHQ07283 1943 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms