RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 C16orf71Q8IYS4 520 aaPredicted RBP13.29□□□□□ -0.28
UBE2D3-227ENST00000508818 KDM2BQ8NHM5 1336 aa13.29□□□□□ -0.28
UBE2D3-227ENST00000508818 AFDNP55196 1824 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-227ENST00000508818 RIPK4P57078 832 aa13.28□□□□□ -0.28
UBE2D3-227ENST00000508818 NGEFQ8N5V2 710 aa13.28□□□□□ -0.28
UBE2D3-227ENST00000508818 THUMPD2Q9BTF0 503 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-227ENST00000508818 ARFGEF1Q9Y6D6 1849 aa13.27□□□□□ -0.28
UBE2D3-227ENST00000508818 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.28
UBE2D3-227ENST00000508818 NBPF26B4DH59 902 aa13.27□□□□□ -0.29
UBE2D3-227ENST00000508818 KIF3CO14782 793 aa13.27□□□□□ -0.29
UBE2D3-227ENST00000508818 GTF2E1P29083 439 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-227ENST00000508818 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-227ENST00000508818 TPTE2Q6XPS3 522 aa13.27□□□□□ -0.29
UBE2D3-227ENST00000508818 NBPF15Q8N660 670 aa13.27□□□□□ -0.29
UBE2D3-227ENST00000508818 CNKSR1Q969H4 720 aa13.27□□□□□ -0.29
UBE2D3-227ENST00000508818 NIP7Q9Y221 180 aaKnown RBP eCLIP13.27□□□□□ -0.29
UBE2D3-227ENST00000508818 RRP7AQ9Y3A4 280 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-227ENST00000508818 FAM177BA6PVY3 158 aa13.26□□□□□ -0.29
UBE2D3-227ENST00000508818 TOMM70O94826 608 aa13.26□□□□□ -0.29
UBE2D3-227ENST00000508818 HSPA6P17066 643 aa13.26□□□□□ -0.29
UBE2D3-227ENST00000508818 LMNB1P20700 586 aa13.26□□□□□ -0.29
UBE2D3-227ENST00000508818 EIF4A1P60842 406 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-227ENST00000508818 LMOD3Q0VAK6 560 aa13.26□□□□□ -0.29
UBE2D3-227ENST00000508818 POLA2Q14181 598 aa13.26□□□□□ -0.29
UBE2D3-227ENST00000508818 WDR43Q15061 677 aaKnown RBP eCLIP13.26□□□□□ -0.29
UBE2D3-227ENST00000508818 MYBBP1AQ9BQG0 1328 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-227ENST00000508818 NMRK2Q9NPI5 230 aa13.26□□□□□ -0.29
UBE2D3-227ENST00000508818 TSPYL4Q9UJ04 414 aa13.26□□□□□ -0.29
UBE2D3-227ENST00000508818 NRXN2Q9P2S2 1712 aa13.25□□□□□ -0.29
UBE2D3-227ENST00000508818 C21orf2O43822 256 aa13.25□□□□□ -0.29
UBE2D3-227ENST00000508818 RASSF7Q02833 373 aa13.25□□□□□ -0.29
UBE2D3-227ENST00000508818 KIF6Q6ZMV9 814 aa13.25□□□□□ -0.29
UBE2D3-227ENST00000508818 MASTLQ96GX5 879 aa13.25□□□□□ -0.29
UBE2D3-227ENST00000508818 RGL2O15211 777 aa13.24□□□□□ -0.29
UBE2D3-227ENST00000508818 MYL6BP14649 208 aa13.24□□□□□ -0.29
UBE2D3-227ENST00000508818 NEUROD2Q15784 382 aa13.24□□□□□ -0.29
UBE2D3-227ENST00000508818 STYK1Q6J9G0 422 aa13.24□□□□□ -0.29
UBE2D3-227ENST00000508818 SCN7AQ01118 1682 aa13.24□□□□□ -0.29
UBE2D3-227ENST00000508818 ZC3H4Q9UPT8 1303 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-227ENST00000508818 ZBTB22O15209 634 aa13.23□□□□□ -0.29
UBE2D3-227ENST00000508818 TMPOP42166 694 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-227ENST00000508818 SOGA3Q5TF21 947 aa13.23□□□□□ -0.29
UBE2D3-227ENST00000508818 CCDC146Q8IYE0 955 aa13.23□□□□□ -0.29
UBE2D3-227ENST00000508818 RRAGCQ9HB90 399 aa13.23□□□□□ -0.29
UBE2D3-227ENST00000508818 DLG5Q8TDM6 1919 aa13.22□□□□□ -0.29
UBE2D3-227ENST00000508818 ERVV-1B6SEH8 477 aa13.22□□□□□ -0.29
UBE2D3-227ENST00000508818 SRGNP10124 158 aa13.22□□□□□ -0.29
UBE2D3-227ENST00000508818 EIF2S2P20042 333 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-227ENST00000508818 HLFQ16534 295 aa13.22□□□□□ -0.29
UBE2D3-227ENST00000508818 DPY19L2Q6NUT2 758 aa13.22□□□□□ -0.29
UBE2D3-227ENST00000508818 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
UBE2D3-227ENST00000508818 BABAM1Q9NWV8 329 aa13.22□□□□□ -0.29
UBE2D3-227ENST00000508818 NPR1P16066 1061 aa13.21□□□□□ -0.29
UBE2D3-227ENST00000508818 PRPF40BQ6NWY9 871 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-227ENST00000508818 RBM46Q8TBY0 533 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-227ENST00000508818 RUNDC1Q96C34 613 aa13.21□□□□□ -0.29
UBE2D3-227ENST00000508818 TAOK3Q9H2K8 898 aa13.21□□□□□ -0.29
UBE2D3-227ENST00000508818 LAS1LQ9Y4W2 734 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-227ENST00000508818 ERBB4Q15303 1308 aa13.2□□□□□ -0.3
UBE2D3-227ENST00000508818 MAP3K15Q6ZN16 1313 aa13.2□□□□□ -0.3
UBE2D3-227ENST00000508818 GLTPD2A6NH11 291 aa13.2□□□□□ -0.3
UBE2D3-227ENST00000508818 NFKBIEO00221 500 aa13.2□□□□□ -0.3
UBE2D3-227ENST00000508818 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
UBE2D3-227ENST00000508818 APLP1P51693 650 aa13.2□□□□□ -0.3
UBE2D3-227ENST00000508818 ERFEQ4G0M1 354 aa13.2□□□□□ -0.3
UBE2D3-227ENST00000508818 ZBTB3Q9H5J0 574 aa13.2□□□□□ -0.3
UBE2D3-227ENST00000508818 DLEC1Q9Y238 1755 aa13.2□□□□□ -0.3
UBE2D3-227ENST00000508818 VEGFAP15692 232 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-227ENST00000508818 GPTP24298 496 aa13.19□□□□□ -0.3
UBE2D3-227ENST00000508818 ALDH1B1P30837 517 aa13.19□□□□□ -0.3
UBE2D3-227ENST00000508818 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
UBE2D3-227ENST00000508818 SBF1O95248 1867 aa13.19□□□□□ -0.3
UBE2D3-227ENST00000508818 ANKRD31Q8N7Z5 1873 aa13.19□□□□□ -0.3
UBE2D3-227ENST00000508818 BCORQ6W2J9 1755 aa13.18□□□□□ -0.3
UBE2D3-227ENST00000508818 FSTL1Q12841 308 aa13.18□□□□□ -0.3
UBE2D3-227ENST00000508818 CCDC93Q567U6 631 aa13.18□□□□□ -0.3
UBE2D3-227ENST00000508818 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
UBE2D3-227ENST00000508818 KDM3BQ7LBC6 1761 aa13.17□□□□□ -0.3
UBE2D3-227ENST00000508818 PRELPP51888 382 aa13.17□□□□□ -0.3
UBE2D3-227ENST00000508818 PPP1R42Q7Z4L9 355 aa13.17□□□□□ -0.3
UBE2D3-227ENST00000508818 NUTM1Q86Y26 1132 aa13.17□□□□□ -0.3
UBE2D3-227ENST00000508818 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
UBE2D3-227ENST00000508818 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
UBE2D3-227ENST00000508818 PRKRIP1Q9H875 184 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-227ENST00000508818 LTBP3Q9NS15 1303 aa13.16□□□□□ -0.3
UBE2D3-227ENST00000508818 KLRG2A4D1S0 409 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-227ENST00000508818 GIGYF2Q6Y7W6 1299 aaKnown RBP13.16□□□□□ -0.3
UBE2D3-227ENST00000508818 RTKN2Q8IZC4 609 aa13.16□□□□□ -0.3
UBE2D3-227ENST00000508818 SMC1BQ8NDV3 1235 aa13.16□□□□□ -0.3
UBE2D3-227ENST00000508818 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-227ENST00000508818 LAMB4A4D0S4 1761 aa13.16□□□□□ -0.3
UBE2D3-227ENST00000508818 CHL1O00533 1208 aa13.15□□□□□ -0.3
UBE2D3-227ENST00000508818 AIMP1Q12904 312 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-227ENST00000508818 PARP10Q53GL7 1025 aa13.15□□□□□ -0.3
UBE2D3-227ENST00000508818 SUSD4Q5VX71 490 aa13.15□□□□□ -0.3
UBE2D3-227ENST00000508818 ZNF34Q8IZ26 560 aa13.15□□□□□ -0.3
UBE2D3-227ENST00000508818 TMX4Q9H1E5 349 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-227ENST00000508818 COL11A2P13942 1736 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-227ENST00000508818 SLX4Q8IY92 1834 aa13.14□□□□□ -0.31
UBE2D3-227ENST00000508818 ANXA1P04083 346 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms