RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 CHMP5Q9NZZ3 219 aa21.66■■□□□ 1.06
SFXN1-208ENST00000507823 DISP2A7MBM2 1401 aa21.66■■□□□ 1.06
SFXN1-208ENST00000507823 PLCH1Q4KWH8 1693 aa21.65■■□□□ 1.06
SFXN1-208ENST00000507823 EPB41L2O43491 1005 aaKnown RBP21.65■■□□□ 1.06
SFXN1-208ENST00000507823 FRAT2O75474 233 aaPredicted RBP21.65■■□□□ 1.06
SFXN1-208ENST00000507823 ESYT1Q9BSJ8 1104 aa21.65■■□□□ 1.06
SFXN1-208ENST00000507823 BCL11AQ9H165 835 aa21.65■■□□□ 1.06
SFXN1-208ENST00000507823 NUP188Q5SRE5 1749 aa21.65■■□□□ 1.06
SFXN1-208ENST00000507823 CHMLP26374 656 aa21.65■■□□□ 1.06
SFXN1-208ENST00000507823 IL17RAQ96F46 866 aa21.65■■□□□ 1.06
SFXN1-208ENST00000507823 TTC41PQ6P2S7 1318 aa21.64■■□□□ 1.06
SFXN1-208ENST00000507823 AFDNP55196 1824 aaKnown RBP21.64■■□□□ 1.06
SFXN1-208ENST00000507823 COL16A1Q07092 1604 aaPredicted RBP21.64■■□□□ 1.05
SFXN1-208ENST00000507823 DEKP35659 375 aaKnown RBP21.64■■□□□ 1.05
SFXN1-208ENST00000507823 EVA1CP58658 441 aa21.64■■□□□ 1.05
SFXN1-208ENST00000507823 AK9Q5TCS8 1911 aa21.64■■□□□ 1.05
SFXN1-208ENST00000507823 CD2BP2O95400 341 aaKnown RBP21.63■■□□□ 1.05
SFXN1-208ENST00000507823 BICC1Q9H694 974 aaKnown RBP21.63■■□□□ 1.05
SFXN1-208ENST00000507823 K7ELQ4 463 aaPredicted RBP21.63■■□□□ 1.05
SFXN1-208ENST00000507823 NUTM1Q86Y26 1132 aa21.63■■□□□ 1.05
SFXN1-208ENST00000507823 PLBD2Q8NHP8 589 aa21.63■■□□□ 1.05
SFXN1-208ENST00000507823 STRN4Q9NRL3 753 aa21.62■■□□□ 1.05
SFXN1-208ENST00000507823 CIZ1Q9ULV3 898 aaPredicted RBP21.62■■□□□ 1.05
SFXN1-208ENST00000507823 LTBP4Q8N2S1 1624 aa21.62■■□□□ 1.05
SFXN1-208ENST00000507823 MYD88Q99836 296 aa21.62■■□□□ 1.05
SFXN1-208ENST00000507823 RBM42Q9BTD8 480 aaKnown RBP21.62■■□□□ 1.05
SFXN1-208ENST00000507823 LRP6O75581 1613 aa21.62■■□□□ 1.05
SFXN1-208ENST00000507823 NBPF26B4DH59 902 aa21.61■■□□□ 1.05
SFXN1-208ENST00000507823 NBPF14Q5TI25 921 aa21.61■■□□□ 1.05
SFXN1-208ENST00000507823 NBPF10Q6P3W6 841 aaKnown RBP21.61■■□□□ 1.05
SFXN1-208ENST00000507823 UNC5CLQ8IV45 518 aa21.61■■□□□ 1.05
SFXN1-208ENST00000507823 NBPF15Q8N660 670 aa21.61■■□□□ 1.05
SFXN1-208ENST00000507823 WNK3Q9BYP7 1800 aa21.6■■□□□ 1.05
SFXN1-208ENST00000507823 RABL6Q3YEC7 729 aaPredicted RBP21.59■■□□□ 1.05
SFXN1-208ENST00000507823 CLASRPQ8N2M8 674 aaKnown RBP21.59■■□□□ 1.05
SFXN1-208ENST00000507823 CASP7P55210 303 aa21.59■■□□□ 1.05
SFXN1-208ENST00000507823 TRIM6-TRIM34B2RNG4 842 aa21.58■■□□□ 1.05
SFXN1-208ENST00000507823 GLRX3O76003 335 aaKnown RBP21.58■■□□□ 1.05
SFXN1-208ENST00000507823 PA2G4Q9UQ80 394 aaKnown RBP21.58■■□□□ 1.05
SFXN1-208ENST00000507823 RILPL2Q969X0 211 aa21.58■■□□□ 1.04
SFXN1-208ENST00000507823 BTG4Q9NY30 223 aa21.58■■□□□ 1.04
SFXN1-208ENST00000507823 DDX54Q8TDD1 881 aaKnown RBP21.57■■□□□ 1.04
SFXN1-208ENST00000507823 SASH1O94885 1247 aa21.57■■□□□ 1.04
SFXN1-208ENST00000507823 ANAPC15P60006 121 aa21.57■■□□□ 1.04
SFXN1-208ENST00000507823 OS9Q13438 667 aaPredicted RBP21.57■■□□□ 1.04
SFXN1-208ENST00000507823 TJP1Q07157 1748 aa21.57■■□□□ 1.04
SFXN1-208ENST00000507823 ITGB4P16144 1822 aa21.56■■□□□ 1.04
SFXN1-208ENST00000507823 EPHA10Q5JZY3 1008 aa21.56■■□□□ 1.04
SFXN1-208ENST00000507823 COPRSQ9NQ92 184 aa21.56■■□□□ 1.04
SFXN1-208ENST00000507823 PIP4K2AP48426 406 aaPredicted RBP21.56■■□□□ 1.04
SFXN1-208ENST00000507823 SPRYD3Q8NCJ5 442 aa21.56■■□□□ 1.04
SFXN1-208ENST00000507823 IL27Q8NEV9 243 aa21.56■■□□□ 1.04
SFXN1-208ENST00000507823 RFX5P48382 616 aaPredicted RBP21.55■■□□□ 1.04
SFXN1-208ENST00000507823 VSIG10Q8N0Z9 540 aa21.55■■□□□ 1.04
SFXN1-208ENST00000507823 CNTROBQ8N137 903 aa21.55■■□□□ 1.04
SFXN1-208ENST00000507823 ECHDC1Q9NTX5 307 aa21.55■■□□□ 1.04
SFXN1-208ENST00000507823 G3BP1Q13283 466 aaKnown RBP eCLIP21.54■■□□□ 1.04
SFXN1-208ENST00000507823 H7C1W4 665 aa21.53■■□□□ 1.04
SFXN1-208ENST00000507823 GPATCH3Q96I76 525 aa21.53■■□□□ 1.04
SFXN1-208ENST00000507823 TMOD3Q9NYL9 352 aa21.53■■□□□ 1.04
SFXN1-208ENST00000507823 SGSM2O43147 1006 aa21.52■■□□□ 1.04
SFXN1-208ENST00000507823 ST18O60284 1047 aa21.51■■□□□ 1.03
SFXN1-208ENST00000507823 A1BGP04217 495 aa21.51■■□□□ 1.03
SFXN1-208ENST00000507823 IFIT2P09913 472 aaKnown RBP21.51■■□□□ 1.03
SFXN1-208ENST00000507823 TTLL7Q6ZT98 887 aa21.51■■□□□ 1.03
SFXN1-208ENST00000507823 TEX13AQ9BXU3 409 aaPredicted RBP21.51■■□□□ 1.03
SFXN1-208ENST00000507823 NRAPQ86VF7 1730 aa21.51■■□□□ 1.03
SFXN1-208ENST00000507823 MCCP23508 829 aa21.51■■□□□ 1.03
SFXN1-208ENST00000507823 EAF2Q96CJ1 260 aaPredicted RBP21.51■■□□□ 1.03
SFXN1-208ENST00000507823 MCM4P33991 863 aa21.5■■□□□ 1.03
SFXN1-208ENST00000507823 RAB3GAP1Q15042 981 aa21.5■■□□□ 1.03
SFXN1-208ENST00000507823 IL25Q9H293 177 aa21.5■■□□□ 1.03
SFXN1-208ENST00000507823 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.5■■□□□ 1.03
SFXN1-208ENST00000507823 A0A087WZG4 1122 aa21.5■■□□□ 1.03
SFXN1-208ENST00000507823 PTPN12Q05209 780 aaKnown RBP21.5■■□□□ 1.03
SFXN1-208ENST00000507823 UBE3BQ7Z3V4 1068 aa21.5■■□□□ 1.03
SFXN1-208ENST00000507823 AACSQ86V21 672 aa21.5■■□□□ 1.03
SFXN1-208ENST00000507823 PIGBQ92521 554 aa21.5■■□□□ 1.03
SFXN1-208ENST00000507823 BCL9O00512 1426 aa21.49■■□□□ 1.03
SFXN1-208ENST00000507823 GSE1Q14687 1217 aa21.49■■□□□ 1.03
SFXN1-208ENST00000507823 ATP5J2-PTCD1G3V325 749 aa21.49■■□□□ 1.03
SFXN1-208ENST00000507823 PTCD1O75127 700 aaKnown RBP21.49■■□□□ 1.03
SFXN1-208ENST00000507823 CCDC191Q8NCU4 936 aa21.49■■□□□ 1.03
SFXN1-208ENST00000507823 ANO2Q9NQ90 1003 aa21.49■■□□□ 1.03
SFXN1-208ENST00000507823 HSPA4P34932 840 aa21.48■■□□□ 1.03
SFXN1-208ENST00000507823 FOXO4P98177 505 aa21.48■■□□□ 1.03
SFXN1-208ENST00000507823 ATG3Q9NT62 314 aa21.48■■□□□ 1.03
SFXN1-208ENST00000507823 CWC25Q9NXE8 425 aaPredicted RBP21.48■■□□□ 1.03
SFXN1-208ENST00000507823 RAD50Q92878 1312 aa21.48■■□□□ 1.03
SFXN1-208ENST00000507823 EVI5LQ96CN4 794 aa21.47■■□□□ 1.03
SFXN1-208ENST00000507823 PHLPP1O60346 1717 aa21.47■■□□□ 1.03
SFXN1-208ENST00000507823 MCM2P49736 904 aa21.46■■□□□ 1.03
SFXN1-208ENST00000507823 TRIM28Q13263 835 aaKnown RBP21.46■■□□□ 1.03
SFXN1-208ENST00000507823 ISCA1Q9BUE6 129 aa21.46■■□□□ 1.03
SFXN1-208ENST00000507823 LSG1Q9H089 658 aaKnown RBP21.46■■□□□ 1.03
SFXN1-208ENST00000507823 PALD1Q9ULE6 856 aa21.46■■□□□ 1.03
SFXN1-208ENST00000507823 MAP4K4O95819 1239 aaPredicted RBP21.46■■□□□ 1.03
SFXN1-208ENST00000507823 SNRKQ9NRH2 765 aa21.46■■□□□ 1.03
SFXN1-208ENST00000507823 ASAP1Q9ULH1 1129 aa21.46■■□□□ 1.03
SFXN1-208ENST00000507823 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms