RNA–Protein interactions for RNA: ENST00000507528.5

PDCD6-206, Transcript of programmed cell death 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDCD6, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-206ENST00000507528 U2SURPO15042 1029 aaKnown RBP25.65■■□□□ 1.7
PDCD6-206ENST00000507528 PRPF40BQ6NWY9 871 aaKnown RBP25.65■■□□□ 1.7
PDCD6-206ENST00000507528 CREBZFQ9NS37 354 aa25.65■■□□□ 1.7
PDCD6-206ENST00000507528 SCN4AP35499 1836 aa25.65■■□□□ 1.7
PDCD6-206ENST00000507528 DDNO94850 711 aaPredicted RBP25.64■■□□□ 1.7
PDCD6-206ENST00000507528 ST5P78524 1137 aa25.64■■□□□ 1.7
PDCD6-206ENST00000507528 POTEIP0CG38 1075 aa25.63■■□□□ 1.69
PDCD6-206ENST00000507528 POTEJP0CG39 1038 aa25.63■■□□□ 1.69
PDCD6-206ENST00000507528 SOGA3Q5TF21 947 aa25.63■■□□□ 1.69
PDCD6-206ENST00000507528 NPM2Q86SE8 214 aaKnown RBP25.63■■□□□ 1.69
PDCD6-206ENST00000507528 MASTLQ96GX5 879 aa25.63■■□□□ 1.69
PDCD6-206ENST00000507528 KCNQ3O43525 872 aa25.62■■□□□ 1.69
PDCD6-206ENST00000507528 DZIP3Q86Y13 1208 aaKnown RBP25.62■■□□□ 1.69
PDCD6-206ENST00000507528 BTBD11A6QL63 1104 aa25.61■■□□□ 1.69
PDCD6-206ENST00000507528 NPHP1O15259 732 aa25.61■■□□□ 1.69
PDCD6-206ENST00000507528 C7orf43Q8WVR3 580 aa25.6■■□□□ 1.69
PDCD6-206ENST00000507528 USP16Q9Y5T5 823 aa25.6■■□□□ 1.69
PDCD6-206ENST00000507528 CLEC4GQ6UXB4 293 aa25.59■■□□□ 1.69
PDCD6-206ENST00000507528 PHACTR3Q96KR7 559 aa25.59■■□□□ 1.69
PDCD6-206ENST00000507528 L3MBTL3Q96JM7 780 aaPredicted RBP25.58■■□□□ 1.69
PDCD6-206ENST00000507528 MKRN1Q9UHC7 482 aaKnown RBP25.58■■□□□ 1.69
PDCD6-206ENST00000507528 IQCA1LA6NCM1 817 aa25.57■■□□□ 1.68
PDCD6-206ENST00000507528 PASKQ96RG2 1323 aa25.57■■□□□ 1.68
PDCD6-206ENST00000507528 KLRG2A4D1S0 409 aaPredicted RBP25.56■■□□□ 1.68
PDCD6-206ENST00000507528 PIP4K2AP48426 406 aaPredicted RBP25.56■■□□□ 1.68
PDCD6-206ENST00000507528 NBPF5PQ86XG9 351 aaPredicted RBP25.56■■□□□ 1.68
PDCD6-206ENST00000507528 RSPH6AQ9H0K4 717 aa25.56■■□□□ 1.68
PDCD6-206ENST00000507528 PRAMEF22A3QJZ6 481 aa25.55■■□□□ 1.68
PDCD6-206ENST00000507528 PRKAR2BP31323 418 aa25.55■■□□□ 1.68
PDCD6-206ENST00000507528 CCDC93Q567U6 631 aa25.55■■□□□ 1.68
PDCD6-206ENST00000507528 LDHDQ86WU2 507 aa25.55■■□□□ 1.68
PDCD6-206ENST00000507528 TAF1DQ9H5J8 278 aaPredicted RBP25.55■■□□□ 1.68
PDCD6-206ENST00000507528 CNTNAP1P78357 1384 aa25.55■■□□□ 1.68
PDCD6-206ENST00000507528 NPR1P16066 1061 aa25.54■■□□□ 1.68
PDCD6-206ENST00000507528 ZNF652Q9Y2D9 606 aa25.54■■□□□ 1.68
PDCD6-206ENST00000507528 ADAMTSL1Q8N6G6 1762 aa25.54■■□□□ 1.68
PDCD6-206ENST00000507528 RGL2O15211 777 aa25.53■■□□□ 1.68
PDCD6-206ENST00000507528 SNRPA1P09661 255 aaKnown RBP25.52■■□□□ 1.68
PDCD6-206ENST00000507528 FKBP4Q02790 459 aaKnown RBP eCLIP25.52■■□□□ 1.68
PDCD6-206ENST00000507528 CNGB1Q14028 1251 aaPredicted RBP25.52■■□□□ 1.68
PDCD6-206ENST00000507528 ITGBL1O95965 494 aaPredicted RBP25.5■■□□□ 1.67
PDCD6-206ENST00000507528 TPTE2Q6XPS3 522 aa25.5■■□□□ 1.67
PDCD6-206ENST00000507528 ZNF541Q9H0D2 1346 aa25.49■■□□□ 1.67
PDCD6-206ENST00000507528 NBPF26B4DH59 902 aa25.49■■□□□ 1.67
PDCD6-206ENST00000507528 FOXN1O15353 648 aa25.49■■□□□ 1.67
PDCD6-206ENST00000507528 NBPF10Q6P3W6 841 aaKnown RBP25.49■■□□□ 1.67
PDCD6-206ENST00000507528 NBPF15Q8N660 670 aa25.49■■□□□ 1.67
PDCD6-206ENST00000507528 ZNF277Q9NRM2 450 aaPredicted RBP25.49■■□□□ 1.67
PDCD6-206ENST00000507528 MCM10Q7L590 875 aa25.48■■□□□ 1.67
PDCD6-206ENST00000507528 CFAP53Q96M91 514 aa25.48■■□□□ 1.67
PDCD6-206ENST00000507528 NIP7Q9Y221 180 aaKnown RBP eCLIP25.48■■□□□ 1.67
PDCD6-206ENST00000507528 LAMB4A4D0S4 1761 aa25.47■■□□□ 1.67
PDCD6-206ENST00000507528 TMEM88BA6NKF7 163 aa25.47■■□□□ 1.67
PDCD6-206ENST00000507528 OLFM4Q6UX06 510 aa25.47■■□□□ 1.67
PDCD6-206ENST00000507528 RTKN2Q8IZC4 609 aa25.47■■□□□ 1.67
PDCD6-206ENST00000507528 RTF1Q92541 710 aaKnown RBP25.46■■□□□ 1.67
PDCD6-206ENST00000507528 PRDM10Q9NQV6 1147 aa25.46■■□□□ 1.67
PDCD6-206ENST00000507528 HACL1Q9UJ83 578 aa25.46■■□□□ 1.67
PDCD6-206ENST00000507528 SNED1Q8TER0 1413 aa25.46■■□□□ 1.67
PDCD6-206ENST00000507528 VEGFBP49765 207 aa25.45■■□□□ 1.66
PDCD6-206ENST00000507528 FZD9O00144 591 aa25.44■■□□□ 1.66
PDCD6-206ENST00000507528 ALDH1B1P30837 517 aa25.44■■□□□ 1.66
PDCD6-206ENST00000507528 EPHX2P34913 555 aa25.44■■□□□ 1.66
PDCD6-206ENST00000507528 EAPPQ56P03 285 aaPredicted RBP25.44■■□□□ 1.66
PDCD6-206ENST00000507528 NUDCQ9Y266 331 aa25.44■■□□□ 1.66
PDCD6-206ENST00000507528 NUP98P52948 1817 aa25.44■■□□□ 1.66
PDCD6-206ENST00000507528 HTATSF1O43719 755 aaKnown RBP25.43■■□□□ 1.66
PDCD6-206ENST00000507528 IARSP41252 1262 aaKnown RBP25.43■■□□□ 1.66
PDCD6-206ENST00000507528 HLFQ16534 295 aa25.43■■□□□ 1.66
PDCD6-206ENST00000507528 FAM177BA6PVY3 158 aa25.42■■□□□ 1.66
PDCD6-206ENST00000507528 DCTN1Q14203 1278 aa25.42■■□□□ 1.66
PDCD6-206ENST00000507528 PNMA8AQ86V59 439 aaPredicted RBP25.42■■□□□ 1.66
PDCD6-206ENST00000507528 SYNE4Q8N205 404 aa25.42■■□□□ 1.66
PDCD6-206ENST00000507528 RNF123Q5XPI4 1314 aa25.41■■□□□ 1.66
PDCD6-206ENST00000507528 U2AF1L5P0DN76 240 aaPredicted RBP25.41■■□□□ 1.66
PDCD6-206ENST00000507528 U2AF1Q01081 240 aaKnown RBP eCLIP25.41■■□□□ 1.66
PDCD6-206ENST00000507528 CLEC11AQ9Y240 323 aa25.41■■□□□ 1.66
PDCD6-206ENST00000507528 CTCFP49711 727 aaPredicted RBP25.4■■□□□ 1.66
PDCD6-206ENST00000507528 CRY2Q49AN0 593 aa25.4■■□□□ 1.66
PDCD6-206ENST00000507528 GPC2Q8N158 579 aa25.4■■□□□ 1.66
PDCD6-206ENST00000507528 PSMD1Q99460 953 aa25.4■■□□□ 1.66
PDCD6-206ENST00000507528 WBP1LQ9NX94 342 aa25.4■■□□□ 1.66
PDCD6-206ENST00000507528 KDM3BQ7LBC6 1761 aa25.39■■□□□ 1.66
PDCD6-206ENST00000507528 RASSF10A6NK89 507 aa25.39■■□□□ 1.66
PDCD6-206ENST00000507528 TAF7Q15545 349 aaPredicted RBP25.39■■□□□ 1.66
PDCD6-206ENST00000507528 CNTROBQ8N137 903 aa25.39■■□□□ 1.66
PDCD6-206ENST00000507528 AIDAQ96BJ3 306 aa25.39■■□□□ 1.66
PDCD6-206ENST00000507528 DLG5Q8TDM6 1919 aa25.39■■□□□ 1.65
PDCD6-206ENST00000507528 MAP1SQ66K74 1059 aaPredicted RBP25.38■■□□□ 1.65
PDCD6-206ENST00000507528 ABCC12Q96J65 1359 aa25.38■■□□□ 1.65
PDCD6-206ENST00000507528 COL4A5P29400 1685 aa25.37■■□□□ 1.65
PDCD6-206ENST00000507528 GTF2E1P29083 439 aaPredicted RBP25.37■■□□□ 1.65
PDCD6-206ENST00000507528 PPP2R1AP30153 589 aa25.37■■□□□ 1.65
PDCD6-206ENST00000507528 LTBP1Q14766 1721 aa25.37■■□□□ 1.65
PDCD6-206ENST00000507528 NYXQ9GZU5 481 aa25.36■■□□□ 1.65
PDCD6-206ENST00000507528 RIC1Q4ADV7 1423 aa25.36■■□□□ 1.65
PDCD6-206ENST00000507528 ERVV-1B6SEH8 477 aa25.35■■□□□ 1.65
PDCD6-206ENST00000507528 DEFB115Q30KQ5 88 aa25.35■■□□□ 1.65
PDCD6-206ENST00000507528 CC2D2BQ6DHV5 1058 aa25.35■■□□□ 1.65
PDCD6-206ENST00000507528 JDP2Q8WYK2 163 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms