RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 SMC1BQ8NDV3 1235 aa19.36■□□□□ 0.69
SEC24D-208ENST00000506622 WDR90Q96KV7 1748 aa19.36■□□□□ 0.69
SEC24D-208ENST00000506622 TAF7Q15545 349 aaPredicted RBP19.35■□□□□ 0.69
SEC24D-208ENST00000506622 DPY19L2Q6NUT2 758 aa19.35■□□□□ 0.69
SEC24D-208ENST00000506622 CNKSR1Q969H4 720 aa19.35■□□□□ 0.69
SEC24D-208ENST00000506622 BCORQ6W2J9 1755 aa19.35■□□□□ 0.69
SEC24D-208ENST00000506622 STYK1Q6J9G0 422 aa19.34■□□□□ 0.69
SEC24D-208ENST00000506622 NBPF5PQ86XG9 351 aaPredicted RBP19.34■□□□□ 0.69
SEC24D-208ENST00000506622 COL11A2P13942 1736 aaPredicted RBP19.34■□□□□ 0.69
SEC24D-208ENST00000506622 TIAM2Q8IVF5 1701 aa19.34■□□□□ 0.69
SEC24D-208ENST00000506622 DICER1Q9UPY3 1922 aaKnown RBP19.34■□□□□ 0.69
SEC24D-208ENST00000506622 FER1L6Q2WGJ9 1857 aa19.34■□□□□ 0.69
SEC24D-208ENST00000506622 SRGNP10124 158 aa19.33■□□□□ 0.69
SEC24D-208ENST00000506622 MASTLQ96GX5 879 aa19.33■□□□□ 0.69
SEC24D-208ENST00000506622 CACNA1SQ13698 1873 aa19.33■□□□□ 0.68
SEC24D-208ENST00000506622 HTRA3P83110 453 aa19.32■□□□□ 0.68
SEC24D-208ENST00000506622 ERFEQ4G0M1 354 aa19.32■□□□□ 0.68
SEC24D-208ENST00000506622 SOGA3Q5TF21 947 aa19.32■□□□□ 0.68
SEC24D-208ENST00000506622 SLX4Q8IY92 1834 aa19.32■□□□□ 0.68
SEC24D-208ENST00000506622 PRPF40BQ6NWY9 871 aaKnown RBP19.31■□□□□ 0.68
SEC24D-208ENST00000506622 TPTE2Q6XPS3 522 aa19.31■□□□□ 0.68
SEC24D-208ENST00000506622 TAOK3Q9H2K8 898 aa19.31■□□□□ 0.68
SEC24D-208ENST00000506622 MIS18AQ9NYP9 233 aa19.31■□□□□ 0.68
SEC24D-208ENST00000506622 NBPF26B4DH59 902 aa19.3■□□□□ 0.68
SEC24D-208ENST00000506622 RGL2O15211 777 aa19.3■□□□□ 0.68
SEC24D-208ENST00000506622 NBPF10Q6P3W6 841 aaKnown RBP19.3■□□□□ 0.68
SEC24D-208ENST00000506622 NBPF15Q8N660 670 aa19.3■□□□□ 0.68
SEC24D-208ENST00000506622 KLRG1Q96E93 195 aa19.3■□□□□ 0.68
SEC24D-208ENST00000506622 NIP7Q9Y221 180 aaKnown RBP eCLIP19.3■□□□□ 0.68
SEC24D-208ENST00000506622 DLG5Q8TDM6 1919 aa19.3■□□□□ 0.68
SEC24D-208ENST00000506622 LTBP3Q9NS15 1303 aa19.3■□□□□ 0.68
SEC24D-208ENST00000506622 PNISRQ8TF01 805 aaKnown RBP19.29■□□□□ 0.68
SEC24D-208ENST00000506622 NPR1P16066 1061 aa19.27■□□□□ 0.68
SEC24D-208ENST00000506622 PNNQ9H307 717 aaKnown RBP19.27■□□□□ 0.68
SEC24D-208ENST00000506622 ARFGEF2Q9Y6D5 1785 aa19.27■□□□□ 0.68
SEC24D-208ENST00000506622 FAM177BA6PVY3 158 aa19.26■□□□□ 0.67
SEC24D-208ENST00000506622 GTF2E1P29083 439 aaPredicted RBP19.26■□□□□ 0.67
SEC24D-208ENST00000506622 POTECB2RU33 542 aa19.25■□□□□ 0.67
SEC24D-208ENST00000506622 NGEFQ8N5V2 710 aa19.25■□□□□ 0.67
SEC24D-208ENST00000506622 KLRG2A4D1S0 409 aaPredicted RBP19.25■□□□□ 0.67
SEC24D-208ENST00000506622 NFE2L2Q16236 605 aa19.25■□□□□ 0.67
SEC24D-208ENST00000506622 HLFQ16534 295 aa19.25■□□□□ 0.67
SEC24D-208ENST00000506622 CCDC93Q567U6 631 aa19.25■□□□□ 0.67
SEC24D-208ENST00000506622 JMYQ8N9B5 988 aa19.25■□□□□ 0.67
SEC24D-208ENST00000506622 PLEKHF1Q96S99 279 aa19.25■□□□□ 0.67
SEC24D-208ENST00000506622 LAMB4A4D0S4 1761 aa19.24■□□□□ 0.67
SEC24D-208ENST00000506622 MAPK8IP3Q9UPT6 1336 aa19.24■□□□□ 0.67
SEC24D-208ENST00000506622 C7orf43Q8WVR3 580 aa19.24■□□□□ 0.67
SEC24D-208ENST00000506622 RRP7AQ9Y3A4 280 aaKnown RBP19.24■□□□□ 0.67
SEC24D-208ENST00000506622 DDNO94850 711 aaPredicted RBP19.23■□□□□ 0.67
SEC24D-208ENST00000506622 ALDH1B1P30837 517 aa19.23■□□□□ 0.67
SEC24D-208ENST00000506622 EIF4A1P60842 406 aaKnown RBP19.23■□□□□ 0.67
SEC24D-208ENST00000506622 NYXQ9GZU5 481 aa19.23■□□□□ 0.67
SEC24D-208ENST00000506622 KDM3BQ7LBC6 1761 aa19.22■□□□□ 0.67
SEC24D-208ENST00000506622 NUP98P52948 1817 aa19.22■□□□□ 0.67
SEC24D-208ENST00000506622 ERVV-1B6SEH8 477 aa19.22■□□□□ 0.67
SEC24D-208ENST00000506622 KIF6Q6ZMV9 814 aa19.22■□□□□ 0.67
SEC24D-208ENST00000506622 MYL6BP14649 208 aa19.21■□□□□ 0.67
SEC24D-208ENST00000506622 RTKN2Q8IZC4 609 aa19.21■□□□□ 0.67
SEC24D-208ENST00000506622 THUMPD2Q9BTF0 503 aaKnown RBP19.21■□□□□ 0.67
SEC24D-208ENST00000506622 FKBP4Q02790 459 aaKnown RBP eCLIP19.2■□□□□ 0.66
SEC24D-208ENST00000506622 MAP3K15Q6ZN16 1313 aa19.2■□□□□ 0.66
SEC24D-208ENST00000506622 IQCA1LA6NCM1 817 aa19.19■□□□□ 0.66
SEC24D-208ENST00000506622 CHADLQ6NUI6 762 aa19.19■□□□□ 0.66
SEC24D-208ENST00000506622 ZNF277Q9NRM2 450 aaPredicted RBP19.19■□□□□ 0.66
SEC24D-208ENST00000506622 TTLL7Q6ZT98 887 aa19.18■□□□□ 0.66
SEC24D-208ENST00000506622 NUTM1Q86Y26 1132 aa19.18■□□□□ 0.66
SEC24D-208ENST00000506622 OLFM4Q6UX06 510 aa19.17■□□□□ 0.66
SEC24D-208ENST00000506622 ZBTB3Q9H5J0 574 aa19.17■□□□□ 0.66
SEC24D-208ENST00000506622 TSPYL4Q9UJ04 414 aa19.17■□□□□ 0.66
SEC24D-208ENST00000506622 SCN4AP35499 1836 aa19.17■□□□□ 0.66
SEC24D-208ENST00000506622 GPTP24298 496 aa19.16■□□□□ 0.66
SEC24D-208ENST00000506622 RIPK4P57078 832 aa19.16■□□□□ 0.66
SEC24D-208ENST00000506622 RALBP1Q15311 655 aa19.15■□□□□ 0.66
SEC24D-208ENST00000506622 CRY2Q49AN0 593 aa19.15■□□□□ 0.66
SEC24D-208ENST00000506622 SYNE4Q8N205 404 aa19.15■□□□□ 0.66
SEC24D-208ENST00000506622 RPGRQ92834 1020 aaKnown RBP19.15■□□□□ 0.66
SEC24D-208ENST00000506622 L3MBTL3Q96JM7 780 aaPredicted RBP19.15■□□□□ 0.66
SEC24D-208ENST00000506622 ERBB4Q15303 1308 aa19.15■□□□□ 0.66
SEC24D-208ENST00000506622 POTEIP0CG38 1075 aa19.14■□□□□ 0.65
SEC24D-208ENST00000506622 POTEJP0CG39 1038 aa19.14■□□□□ 0.65
SEC24D-208ENST00000506622 IARSP41252 1262 aaKnown RBP19.14■□□□□ 0.65
SEC24D-208ENST00000506622 CC2D2BQ6DHV5 1058 aa19.14■□□□□ 0.65
SEC24D-208ENST00000506622 ABCC12Q96J65 1359 aa19.14■□□□□ 0.65
SEC24D-208ENST00000506622 SUSD4Q5VX71 490 aa19.13■□□□□ 0.65
SEC24D-208ENST00000506622 GIGYF2Q6Y7W6 1299 aaKnown RBP19.13■□□□□ 0.65
SEC24D-208ENST00000506622 LDHDQ86WU2 507 aa19.13■□□□□ 0.65
SEC24D-208ENST00000506622 TAF1DQ9H5J8 278 aaPredicted RBP19.13■□□□□ 0.65
SEC24D-208ENST00000506622 IBTKQ9P2D0 1353 aaPredicted RBP19.12■□□□□ 0.65
SEC24D-208ENST00000506622 ZNF541Q9H0D2 1346 aa19.12■□□□□ 0.65
SEC24D-208ENST00000506622 EIF2S2P20042 333 aaKnown RBP19.12■□□□□ 0.65
SEC24D-208ENST00000506622 LMOD3Q0VAK6 560 aa19.12■□□□□ 0.65
SEC24D-208ENST00000506622 PPP1R42Q7Z4L9 355 aa19.12■□□□□ 0.65
SEC24D-208ENST00000506622 ZNF34Q8IZ26 560 aa19.12■□□□□ 0.65
SEC24D-208ENST00000506622 JDP2Q8WYK2 163 aa19.12■□□□□ 0.65
SEC24D-208ENST00000506622 RBM17Q96I25 401 aaKnown RBP19.12■□□□□ 0.65
SEC24D-208ENST00000506622 PSMD1Q99460 953 aa19.12■□□□□ 0.65
SEC24D-208ENST00000506622 CREBZFQ9NS37 354 aa19.12■□□□□ 0.65
SEC24D-208ENST00000506622 BABAM1Q9NWV8 329 aa19.12■□□□□ 0.65
SEC24D-208ENST00000506622 HACL1Q9UJ83 578 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms