RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 STRN4Q9NRL3 753 aa7.09□□□□□ -1.27
HMGB1P29-201ENST00000505659 PHF24Q9UPV7 400 aa7.09□□□□□ -1.27
HMGB1P29-201ENST00000505659 GJA3Q9Y6H8 435 aa7.09□□□□□ -1.27
HMGB1P29-201ENST00000505659 ARHGEF15O94989 841 aa7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 MAPTP10636 758 aaKnown RBP7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 TNP2Q05952 138 aa7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 GRIN2CQ14957 1233 aa7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 FIGNL1Q6PIW4 674 aa7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 ZNF280CQ8ND82 737 aa7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 SERPINA10Q9UK55 444 aa7.08□□□□□ -1.28
HMGB1P29-201ENST00000505659 FAM181BA6NEQ2 426 aa7.07□□□□□ -1.28
HMGB1P29-201ENST00000505659 BMP4P12644 408 aa7.07□□□□□ -1.28
HMGB1P29-201ENST00000505659 IGFBP4P22692 258 aa7.07□□□□□ -1.28
HMGB1P29-201ENST00000505659 ALDH16A1Q8IZ83 802 aa7.07□□□□□ -1.28
HMGB1P29-201ENST00000505659 ADAMTS8Q9UP79 889 aa7.07□□□□□ -1.28
HMGB1P29-201ENST00000505659 CHMP3Q9Y3E7 222 aa7.07□□□□□ -1.28
HMGB1P29-201ENST00000505659 FAM157BP0CG42 384 aa7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 WEE1P30291 646 aa7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 FAM69CQ0P6D2 419 aa7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 C1orf53Q5VUE5 145 aa7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 C1orf229Q6ZS94 237 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 STAG2Q8N3U4 1231 aa7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 PRIMPOLQ96LW4 560 aa7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 OXCT2Q9BYC2 517 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P29-201ENST00000505659 EFSO43281 561 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 PRMT3O60678 531 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 ATG7O95352 703 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 MAP2K3P46734 347 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 SAMD5Q5TGI4 173 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 TMEM164Q5U3C3 297 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 PBXIP1Q96AQ6 731 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 SUSD3Q96L08 255 aa7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 NSFL1CQ9UNZ2 370 aaKnown RBP7.05□□□□□ -1.28
HMGB1P29-201ENST00000505659 SHISA8B8ZZ34 492 aa7.04□□□□□ -1.28
HMGB1P29-201ENST00000505659 BCRP11274 1271 aa7.04□□□□□ -1.28
HMGB1P29-201ENST00000505659 MAP3K10Q02779 954 aa7.04□□□□□ -1.28
HMGB1P29-201ENST00000505659 ELOAQ14241 798 aaKnown RBP7.04□□□□□ -1.28
HMGB1P29-201ENST00000505659 NEUROD4Q9HD90 331 aa7.04□□□□□ -1.28
HMGB1P29-201ENST00000505659 ACIN1Q9UKV3 1341 aaKnown RBP7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 SFSWAPQ12872 951 aaKnown RBP7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 FKBP5Q13451 457 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 OCLNQ16625 522 aa7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 QTRT2Q9H974 415 aaKnown RBP7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 KLK14Q9P0G3 267 aa7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 SLAIN2Q9P270 581 aa7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 KLF15Q9UIH9 416 aa7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 GGA1Q9UJY5 639 aa7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 BCS1LQ9Y276 419 aa7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 GPC6Q9Y625 555 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P29-201ENST00000505659 OIP5O43482 229 aa7.02□□□□□ -1.29
HMGB1P29-201ENST00000505659 TYRO3Q06418 890 aa7.02□□□□□ -1.29
HMGB1P29-201ENST00000505659 CEP63Q96MT8 703 aa7.02□□□□□ -1.29
HMGB1P29-201ENST00000505659 MARK1Q9P0L2 795 aa7.02□□□□□ -1.29
HMGB1P29-201ENST00000505659 TIMELESSQ9UNS1 1208 aa7.02□□□□□ -1.29
HMGB1P29-201ENST00000505659 NEURL1BA8MQ27 555 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 SUPT5HO00267 1087 aaKnown RBP7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 FOXO3O43524 673 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 PCBP4P57723 403 aaKnown RBP7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 RTN1Q16799 776 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 SWI5Q1ZZU3 235 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 CAPN12Q6ZSI9 719 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 RAB44Q7Z6P3 723 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 SLC30A3Q99726 388 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 BRD7Q9NPI1 651 aa7.01□□□□□ -1.29
HMGB1P29-201ENST00000505659 GSK3AP49840 483 aa7□□□□□ -1.29
HMGB1P29-201ENST00000505659 FAM182BQ5T319 152 aa7□□□□□ -1.29
HMGB1P29-201ENST00000505659 GALNT6Q8NCL4 622 aa7□□□□□ -1.29
HMGB1P29-201ENST00000505659 NEDD1Q8NHV4 660 aa7□□□□□ -1.29
HMGB1P29-201ENST00000505659 MKNK1Q9BUB5 465 aa7□□□□□ -1.29
HMGB1P29-201ENST00000505659 DNMT3AQ9Y6K1 912 aaPredicted RBP7□□□□□ -1.29
HMGB1P29-201ENST00000505659 ARAFP10398 606 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 MARSP56192 900 aaKnown RBP6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 DGKZQ13574 1117 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 SLCO4C1Q6ZQN7 724 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 BTLAQ7Z6A9 289 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 FCHSD1Q86WN1 690 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 GOLGA6L1Q8N7Z2 621 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 EDARADDQ8WWZ3 215 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 VTI1AQ96AJ9 217 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 ANKIB1Q9P2G1 1089 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 GDF2Q9UK05 429 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 LRFN2Q9ULH4 789 aa6.99□□□□□ -1.29
HMGB1P29-201ENST00000505659 SNRPNP63162 240 aaKnown RBP6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 LAMC2Q13753 1193 aa6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 ZNF468Q5VIY5 522 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 SAP130Q9H0E3 1048 aa6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 CXXC1Q9P0U4 656 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 DMGDHQ9UI17 866 aaKnown RBP6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 PRR12Q9ULL5 1215 aa6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 CNTNAP5Q8WYK1 1306 aa6.98□□□□□ -1.29
HMGB1P29-201ENST00000505659 CARNS1A5YM72 827 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 TGFBR3LH3BV60 316 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 EPXP11678 715 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 GRNP28799 593 aaKnown RBP6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 SCNN1AP37088 669 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 SPEM2Q0P670 501 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 ARID3AQ99856 593 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 ENAMQ9NRM1 1142 aa6.97□□□□□ -1.29
HMGB1P29-201ENST00000505659 ADH6P28332 368 aa6.96□□□□□ -1.3
HMGB1P29-201ENST00000505659 IRS1P35568 1242 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 267.4 ms