RNA–Protein interactions for RNA: ENST00000504963.5

SDHC-207, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 4

Gene SDHC, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-207ENST00000504963 COL15A1P39059 1388 aa8.61□□□□□ -1.03
SDHC-207ENST00000504963 CAMTA2O94983 1202 aa8.6□□□□□ -1.03
SDHC-207ENST00000504963 STARD3NLO95772 234 aa8.6□□□□□ -1.03
SDHC-207ENST00000504963 IL6STP40189 918 aaPredicted RBP8.6□□□□□ -1.03
SDHC-207ENST00000504963 HLFQ16534 295 aa8.6□□□□□ -1.03
SDHC-207ENST00000504963 PANK1Q8TE04 598 aa8.6□□□□□ -1.03
SDHC-207ENST00000504963 HYPKQ9NX55 129 aa8.6□□□□□ -1.03
SDHC-207ENST00000504963 SRP68Q9UHB9 627 aaKnown RBP8.6□□□□□ -1.03
SDHC-207ENST00000504963 PNPLA7Q6ZV29 1317 aa8.59□□□□□ -1.03
SDHC-207ENST00000504963 PI4KAP2A4QPH2 592 aa8.59□□□□□ -1.03
SDHC-207ENST00000504963 PSDA5PKW4 1024 aaPredicted RBP8.59□□□□□ -1.03
SDHC-207ENST00000504963 GNPATO15228 680 aa8.59□□□□□ -1.03
SDHC-207ENST00000504963 IGKV5-2P06315 115 aa8.59□□□□□ -1.03
SDHC-207ENST00000504963 CENPBP07199 599 aaPredicted RBP8.59□□□□□ -1.03
SDHC-207ENST00000504963 BAG6P46379 1132 aa8.59□□□□□ -1.03
SDHC-207ENST00000504963 IRX6P78412 446 aaPredicted RBP8.59□□□□□ -1.03
SDHC-207ENST00000504963 AIMP1Q12904 312 aaKnown RBP8.59□□□□□ -1.03
SDHC-207ENST00000504963 ATF7IPQ6VMQ6 1270 aa8.59□□□□□ -1.03
SDHC-207ENST00000504963 TMEM57Q8N5G2 664 aa8.59□□□□□ -1.03
SDHC-207ENST00000504963 PI4KAP1Q8N8J0 262 aa8.59□□□□□ -1.03
SDHC-207ENST00000504963 ARHGAP45Q92619 1136 aa8.59□□□□□ -1.03
SDHC-207ENST00000504963 ARHGEF1Q92888 912 aaKnown RBP8.59□□□□□ -1.03
SDHC-207ENST00000504963 CLUAP1Q96AJ1 413 aa8.59□□□□□ -1.03
SDHC-207ENST00000504963 TBC1D2BQ9UPU7 963 aa8.59□□□□□ -1.03
SDHC-207ENST00000504963 MAP3K15Q6ZN16 1313 aa8.58□□□□□ -1.04
SDHC-207ENST00000504963 KIF16BQ96L93 1317 aa8.58□□□□□ -1.04
SDHC-207ENST00000504963 BEND3Q5T5X7 828 aa8.58□□□□□ -1.04
SDHC-207ENST00000504963 ZKSCAN2Q63HK3 967 aa8.58□□□□□ -1.04
SDHC-207ENST00000504963 KSR2Q6VAB6 950 aa8.58□□□□□ -1.04
SDHC-207ENST00000504963 COL23A1Q86Y22 540 aaPredicted RBP8.58□□□□□ -1.04
SDHC-207ENST00000504963 FRAT1Q92837 279 aaPredicted RBP8.58□□□□□ -1.04
SDHC-207ENST00000504963 STK31Q9BXU1 1019 aa8.58□□□□□ -1.04
SDHC-207ENST00000504963 ZBTB3Q9H5J0 574 aa8.58□□□□□ -1.04
SDHC-207ENST00000504963 PXDNLA1KZ92 1463 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 ANKRD31Q8N7Z5 1873 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 DDX60Q8IY21 1712 aaKnown RBP8.57□□□□□ -1.04
SDHC-207ENST00000504963 NRXN2Q9P2S2 1712 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 PTPRCP08575 1304 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 UBN2Q6ZU65 1347 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 ATP10DQ9P241 1426 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 COL4A1P02462 1669 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.57□□□□□ -1.04
SDHC-207ENST00000504963 FKBP5Q13451 457 aaPredicted RBP8.57□□□□□ -1.04
SDHC-207ENST00000504963 SLC15A2Q16348 729 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 INTS3Q68E01 1043 aaKnown RBP8.57□□□□□ -1.04
SDHC-207ENST00000504963 DNAAF4Q8WXU2 420 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 CRBNQ96SW2 442 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 ISCA1Q9BUE6 129 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 MAP3K2Q9Y2U5 619 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 LAMB2P55268 1798 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 TAF1P21675 1872 aa8.57□□□□□ -1.04
SDHC-207ENST00000504963 USP42Q9H9J4 1324 aaKnown RBP8.56□□□□□ -1.04
SDHC-207ENST00000504963 GYS1P13807 737 aa8.56□□□□□ -1.04
SDHC-207ENST00000504963 CASP7P55210 303 aa8.56□□□□□ -1.04
SDHC-207ENST00000504963 SF3B2Q13435 895 aaKnown RBP8.56□□□□□ -1.04
SDHC-207ENST00000504963 CWF19L2Q2TBE0 894 aaKnown RBP8.56□□□□□ -1.04
SDHC-207ENST00000504963 GIGYF2Q6Y7W6 1299 aaKnown RBP8.56□□□□□ -1.04
SDHC-207ENST00000504963 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
SDHC-207ENST00000504963 DZIP3Q86Y13 1208 aaKnown RBP8.56□□□□□ -1.04
SDHC-207ENST00000504963 DZIP1LQ8IYY4 767 aaKnown RBP8.56□□□□□ -1.04
SDHC-207ENST00000504963 ZNF34Q8IZ26 560 aa8.56□□□□□ -1.04
SDHC-207ENST00000504963 PLBD2Q8NHP8 589 aa8.56□□□□□ -1.04
SDHC-207ENST00000504963 METTL22Q9BUU2 404 aaPredicted RBP8.56□□□□□ -1.04
SDHC-207ENST00000504963 NARFQ9UHQ1 456 aa8.56□□□□□ -1.04
SDHC-207ENST00000504963 COG6Q9Y2V7 657 aa8.56□□□□□ -1.04
SDHC-207ENST00000504963 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
SDHC-207ENST00000504963 ZNF330Q9Y3S2 320 aaPredicted RBP8.56□□□□□ -1.04
SDHC-207ENST00000504963 MYH3P11055 1940 aa8.56□□□□□ -1.04
SDHC-207ENST00000504963 NEURL1BA8MQ27 555 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 ERVV-1B6SEH8 477 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 ATP5J2-PTCD1G3V325 749 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 PHF14O94880 888 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 SSFA2P28290 1259 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 FKBP8Q14318 412 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 PDE3AQ14432 1141 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 R3HDM1Q15032 1099 aaKnown RBP8.55□□□□□ -1.04
SDHC-207ENST00000504963 USPL1Q5W0Q7 1092 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 SYNE4Q8N205 404 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 EXOC6Q8TAG9 804 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 KAZALD1Q96I82 304 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 AK7Q96M32 723 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 API5Q9BZZ5 524 aaKnown RBP8.55□□□□□ -1.04
SDHC-207ENST00000504963 USP44Q9H0E7 712 aa8.55□□□□□ -1.04
SDHC-207ENST00000504963 TNRC6CQ9HCJ0 1690 aaKnown RBP8.55□□□□□ -1.04
SDHC-207ENST00000504963 IBTKQ9P2D0 1353 aaPredicted RBP8.54□□□□□ -1.04
SDHC-207ENST00000504963 DDR1Q08345 913 aa8.54□□□□□ -1.04
SDHC-207ENST00000504963 TRIM28Q13263 835 aaKnown RBP8.54□□□□□ -1.04
SDHC-207ENST00000504963 TCIRG1Q13488 830 aa8.54□□□□□ -1.04
SDHC-207ENST00000504963 IFFO2Q5TF58 517 aa8.54□□□□□ -1.04
SDHC-207ENST00000504963 TBC1D9BQ66K14 1250 aa8.54□□□□□ -1.04
SDHC-207ENST00000504963 JARID2Q92833 1246 aaPredicted RBP8.54□□□□□ -1.04
SDHC-207ENST00000504963 MEIS3Q99687 375 aa8.54□□□□□ -1.04
SDHC-207ENST00000504963 MYD88Q99836 296 aa8.54□□□□□ -1.04
SDHC-207ENST00000504963 CEP350Q5VT06 3117 aa8.54□□□□□ -1.04
SDHC-207ENST00000504963 UTRNP46939 3433 aa8.53□□□□□ -1.04
SDHC-207ENST00000504963 ZBTB7BO15156 539 aaPredicted RBP8.53□□□□□ -1.04
SDHC-207ENST00000504963 IPO8O15397 1037 aaKnown RBP8.53□□□□□ -1.04
SDHC-207ENST00000504963 GPTP24298 496 aa8.53□□□□□ -1.04
SDHC-207ENST00000504963 TM4SF1P30408 202 aa8.53□□□□□ -1.04
SDHC-207ENST00000504963 MVPQ14764 893 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms