RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 CD97P48960 835 aa7.45□□□□□ -1.22
RFC1-208ENST00000504849 ARSJQ5FYB0 599 aaPredicted RBP7.45□□□□□ -1.22
RFC1-208ENST00000504849 KRTAP4-5Q9BYR2 181 aa7.45□□□□□ -1.22
RFC1-208ENST00000504849 TRAPPC3LQ5T215 181 aa7.44□□□□□ -1.22
RFC1-208ENST00000504849 ILDR2Q71H61 639 aa7.44□□□□□ -1.22
RFC1-208ENST00000504849 AIDAQ96BJ3 306 aa7.44□□□□□ -1.22
RFC1-208ENST00000504849 GJD4Q96KN9 370 aaPredicted RBP7.44□□□□□ -1.22
RFC1-208ENST00000504849 SSTR4P31391 388 aa7.43□□□□□ -1.22
RFC1-208ENST00000504849 C14orf37Q86TY3 774 aa7.43□□□□□ -1.22
RFC1-208ENST00000504849 SLC30A3Q99726 388 aa7.43□□□□□ -1.22
RFC1-208ENST00000504849 ADH7P40394 386 aa7.42□□□□□ -1.22
RFC1-208ENST00000504849 NR1H3Q13133 447 aa7.42□□□□□ -1.22
RFC1-208ENST00000504849 NIFKQ9BYG3 293 aaKnown RBP7.42□□□□□ -1.22
RFC1-208ENST00000504849 GPR37L1O60883 481 aa7.41□□□□□ -1.22
RFC1-208ENST00000504849 SCNN1DP51172 638 aa7.41□□□□□ -1.22
RFC1-208ENST00000504849 ZDHHC3Q9NYG2 299 aa7.41□□□□□ -1.22
RFC1-208ENST00000504849 MED26O95402 600 aa7.4□□□□□ -1.22
RFC1-208ENST00000504849 RFC5P40937 340 aa7.39□□□□□ -1.23
RFC1-208ENST00000504849 TSGA10IPQ3SY00 556 aa7.39□□□□□ -1.23
RFC1-208ENST00000504849 IQSEC3Q9UPP2 1182 aaPredicted RBP7.39□□□□□ -1.23
RFC1-208ENST00000504849 USP3Q9Y6I4 520 aa7.39□□□□□ -1.23
RFC1-208ENST00000504849 NBPF1Q3BBV0 1214 aa7.38□□□□□ -1.23
RFC1-208ENST00000504849 PRR23CQ6ZRP0 262 aa7.38□□□□□ -1.23
RFC1-208ENST00000504849 FMR1NBQ8N0W7 255 aaPredicted RBP7.38□□□□□ -1.23
RFC1-208ENST00000504849 USP21Q9UK80 565 aa7.38□□□□□ -1.23
RFC1-208ENST00000504849 LILRB5O75023 590 aa7.37□□□□□ -1.23
RFC1-208ENST00000504849 NOS3P29474 1203 aa7.37□□□□□ -1.23
RFC1-208ENST00000504849 GP2P55259 537 aaKnown RBP7.37□□□□□ -1.23
RFC1-208ENST00000504849 WFDC12Q8WWY7 111 aa7.37□□□□□ -1.23
RFC1-208ENST00000504849 MEGF10Q96KG7 1140 aa7.37□□□□□ -1.23
RFC1-208ENST00000504849 KIAA1324LA8MWY0 1029 aaPredicted RBP7.36□□□□□ -1.23
RFC1-208ENST00000504849 INHAP05111 366 aa7.36□□□□□ -1.23
RFC1-208ENST00000504849 TATP17735 454 aaPredicted RBP7.36□□□□□ -1.23
RFC1-208ENST00000504849 RAC1P63000 192 aa7.36□□□□□ -1.23
RFC1-208ENST00000504849 SFSWAPQ12872 951 aaKnown RBP7.36□□□□□ -1.23
RFC1-208ENST00000504849 ATP1B4Q9UN42 357 aaPredicted RBP7.36□□□□□ -1.23
RFC1-208ENST00000504849 GJA3Q9Y6H8 435 aa7.36□□□□□ -1.23
RFC1-208ENST00000504849 ADAMTS4O75173 837 aa7.35□□□□□ -1.23
RFC1-208ENST00000504849 FSTP19883 344 aa7.35□□□□□ -1.23
RFC1-208ENST00000504849 SMTNP53814 917 aa7.35□□□□□ -1.23
RFC1-208ENST00000504849 RAB44Q7Z6P3 723 aaPredicted RBP7.35□□□□□ -1.23
RFC1-208ENST00000504849 ZNF592Q92610 1267 aa7.35□□□□□ -1.23
RFC1-208ENST00000504849 CEP126Q9P2H0 1117 aa7.35□□□□□ -1.23
RFC1-208ENST00000504849 IREB2P48200 963 aaKnown RBP7.34□□□□□ -1.23
RFC1-208ENST00000504849 GDF10P55107 478 aa7.34□□□□□ -1.23
RFC1-208ENST00000504849 TXLNAP40222 546 aa7.33□□□□□ -1.24
RFC1-208ENST00000504849 SPEM2Q0P670 501 aa7.32□□□□□ -1.24
RFC1-208ENST00000504849 MTFR1Q15390 333 aa7.32□□□□□ -1.24
RFC1-208ENST00000504849 SLC51AQ86UW1 340 aa7.32□□□□□ -1.24
RFC1-208ENST00000504849 C7orf43Q8WVR3 580 aa7.32□□□□□ -1.24
RFC1-208ENST00000504849 AFF1P51825 1210 aaKnown RBP7.31□□□□□ -1.24
RFC1-208ENST00000504849 PHTF2Q8N3S3 785 aa7.31□□□□□ -1.24
RFC1-208ENST00000504849 CDK2AP1O14519 115 aa7.3□□□□□ -1.24
RFC1-208ENST00000504849 USP4Q13107 963 aa7.3□□□□□ -1.24
RFC1-208ENST00000504849 LRRC69Q6ZNQ3 347 aa7.3□□□□□ -1.24
RFC1-208ENST00000504849 BICDL1Q6ZP65 573 aa7.3□□□□□ -1.24
RFC1-208ENST00000504849 DMRTC2Q8IXT2 367 aaPredicted RBP7.3□□□□□ -1.24
RFC1-208ENST00000504849 SLC24A3Q9HC58 644 aa7.3□□□□□ -1.24
RFC1-208ENST00000504849 JPH1Q9HDC5 661 aaPredicted RBP7.3□□□□□ -1.24
RFC1-208ENST00000504849 ZNF330Q9Y3S2 320 aaPredicted RBP7.3□□□□□ -1.24
RFC1-208ENST00000504849 PARP3Q9Y6F1 533 aa7.3□□□□□ -1.24
RFC1-208ENST00000504849 SLC4A9Q96Q91 983 aa7.29□□□□□ -1.24
RFC1-208ENST00000504849 DOLKQ9UPQ8 538 aa7.29□□□□□ -1.24
RFC1-208ENST00000504849 ZDHHC1Q8WTX9 485 aa7.28□□□□□ -1.24
RFC1-208ENST00000504849 NUDT8Q8WV74 236 aa7.28□□□□□ -1.24
RFC1-208ENST00000504849 A6NJY4 79 aa7.27□□□□□ -1.25
RFC1-208ENST00000504849 TMEM229AB2RXF0 380 aa7.27□□□□□ -1.25
RFC1-208ENST00000504849 EML1O00423 815 aa7.27□□□□□ -1.25
RFC1-208ENST00000504849 SOCS7O14512 581 aa7.27□□□□□ -1.25
RFC1-208ENST00000504849 DZIP1LQ8IYY4 767 aaKnown RBP7.27□□□□□ -1.25
RFC1-208ENST00000504849 FAM117AQ9C073 453 aa7.27□□□□□ -1.25
RFC1-208ENST00000504849 CABP1Q9NZU7 370 aa7.27□□□□□ -1.25
RFC1-208ENST00000504849 SERTAD1Q9UHV2 236 aa7.27□□□□□ -1.25
RFC1-208ENST00000504849 NAGPAQ9UK23 515 aa7.27□□□□□ -1.25
RFC1-208ENST00000504849 CHIC2Q9UKJ5 165 aa7.27□□□□□ -1.25
RFC1-208ENST00000504849 SLC6A14Q9UN76 642 aa7.27□□□□□ -1.25
RFC1-208ENST00000504849 TGFB1P01137 390 aa7.26□□□□□ -1.25
RFC1-208ENST00000504849 SPINK2P20155 84 aa7.26□□□□□ -1.25
RFC1-208ENST00000504849 FBXO11Q86XK2 927 aa7.26□□□□□ -1.25
RFC1-208ENST00000504849 KCNQ4P56696 695 aa7.24□□□□□ -1.25
RFC1-208ENST00000504849 TMEM259Q4ZIN3 620 aa7.24□□□□□ -1.25
RFC1-208ENST00000504849 OGFOD2Q6N063 350 aa7.24□□□□□ -1.25
RFC1-208ENST00000504849 ADGRE2Q9UHX3 823 aa7.24□□□□□ -1.25
RFC1-208ENST00000504849 BRPF1P55201 1214 aaPredicted RBP7.23□□□□□ -1.25
RFC1-208ENST00000504849 NEUROD1Q13562 356 aa7.23□□□□□ -1.25
RFC1-208ENST00000504849 OXLD1Q5BKU9 147 aa7.23□□□□□ -1.25
RFC1-208ENST00000504849 PSAPL1Q6NUJ1 521 aa7.23□□□□□ -1.25
RFC1-208ENST00000504849 DTWD1Q8N5C7 304 aa7.23□□□□□ -1.25
RFC1-208ENST00000504849 GRIK5Q16478 980 aa7.22□□□□□ -1.25
RFC1-208ENST00000504849 KRTAP9-7A8MTY7 169 aa7.21□□□□□ -1.26
RFC1-208ENST00000504849 C8AP07357 584 aa7.21□□□□□ -1.26
RFC1-208ENST00000504849 MSL1Q68DK7 614 aa7.21□□□□□ -1.26
RFC1-208ENST00000504849 IGF2-ASQ6U949 168 aa7.21□□□□□ -1.26
RFC1-208ENST00000504849 DDRGK1Q96HY6 314 aa7.21□□□□□ -1.26
RFC1-208ENST00000504849 UBE2OQ9C0C9 1292 aaKnown RBP7.21□□□□□ -1.26
RFC1-208ENST00000504849 BHMTQ93088 406 aa7.2□□□□□ -1.26
RFC1-208ENST00000504849 L3MBTL2Q969R5 705 aa7.2□□□□□ -1.26
RFC1-208ENST00000504849 BRD7Q9NPI1 651 aa7.2□□□□□ -1.26
RFC1-208ENST00000504849 GPC6Q9Y625 555 aaPredicted RBP7.2□□□□□ -1.26
RFC1-208ENST00000504849 DEAF1O75398 565 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms