RNA–Protein interactions for RNA: ENST00000503407.5

ACSL1-203, Transcript of acyl-CoA synthetase long chain family member 1, human

TSL 2

Gene ACSL1, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSL1-203	ENST00000503407	CACTIN	Q8WUQ7	758 aa	Known RBP	13.19	□□□□□ -0.3
ACSL1-203	ENST00000503407	RTF1	Q92541	710 aa	Known RBP	13.19	□□□□□ -0.3
ACSL1-203	ENST00000503407	THUMPD2	Q9BTF0	503 aa	Known RBP	13.19	□□□□□ -0.3
ACSL1-203	ENST00000503407	ZNF446	Q9NWS9	450 aa		13.19	□□□□□ -0.3
ACSL1-203	ENST00000503407	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.19	□□□□□ -0.3
ACSL1-203	ENST00000503407	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
ACSL1-203	ENST00000503407		V9GYY5	206 aa	Predicted RBP	13.19	□□□□□ -0.3
ACSL1-203	ENST00000503407	TYRO3	Q06418	890 aa		13.19	□□□□□ -0.3
ACSL1-203	ENST00000503407	NFE2L2	Q16236	605 aa		13.19	□□□□□ -0.3
ACSL1-203	ENST00000503407	TRIM5	Q9C035	493 aa		13.19	□□□□□ -0.3
ACSL1-203	ENST00000503407	ANKAR	Q7Z5J8	1434 aa		13.18	□□□□□ -0.3
ACSL1-203	ENST00000503407	PTPRU	Q92729	1446 aa		13.18	□□□□□ -0.3
ACSL1-203	ENST00000503407	MAP3K11	Q16584	847 aa		13.18	□□□□□ -0.3
ACSL1-203	ENST00000503407	C8orf58	Q8NAV2	365 aa		13.18	□□□□□ -0.3
ACSL1-203	ENST00000503407	EFCC1	Q9HA90	598 aa		13.18	□□□□□ -0.3
ACSL1-203	ENST00000503407	CHML	P26374	656 aa		13.18	□□□□□ -0.3
ACSL1-203	ENST00000503407	PTPN14	Q15678	1187 aa		13.18	□□□□□ -0.3
ACSL1-203	ENST00000503407	NYAP1	Q6ZVC0	841 aa		13.18	□□□□□ -0.3
ACSL1-203	ENST00000503407	TXNDC2	Q86VQ3	553 aa		13.18	□□□□□ -0.3
ACSL1-203	ENST00000503407	CBX8	Q9HC52	389 aa		13.18	□□□□□ -0.3
ACSL1-203	ENST00000503407	TUBGCP6	Q96RT7	1819 aa		13.17	□□□□□ -0.3
ACSL1-203	ENST00000503407	DNM1	Q05193	864 aa	Known RBP	13.17	□□□□□ -0.3
ACSL1-203	ENST00000503407	CERS3	Q8IU89	383 aa		13.17	□□□□□ -0.3
ACSL1-203	ENST00000503407	RGS22	Q8NE09	1264 aa		13.17	□□□□□ -0.3
ACSL1-203	ENST00000503407	EPB41L2	O43491	1005 aa	Known RBP	13.17	□□□□□ -0.3
ACSL1-203	ENST00000503407	SLU7	O95391	586 aa	Known RBP	13.17	□□□□□ -0.3
ACSL1-203	ENST00000503407	LTK	P29376	864 aa		13.17	□□□□□ -0.3
ACSL1-203	ENST00000503407	TEX2	Q8IWB9	1127 aa		13.17	□□□□□ -0.3
ACSL1-203	ENST00000503407	FYB1	O15117	783 aa		13.16	□□□□□ -0.3
ACSL1-203	ENST00000503407	HMMR	O75330	724 aa		13.16	□□□□□ -0.3
ACSL1-203	ENST00000503407	TDRD7	Q8NHU6	1098 aa	Known RBP	13.16	□□□□□ -0.3
ACSL1-203	ENST00000503407	CERK	Q8TCT0	537 aa		13.16	□□□□□ -0.3
ACSL1-203	ENST00000503407	NUP62CL	Q9H1M0	184 aa		13.16	□□□□□ -0.3
ACSL1-203	ENST00000503407	CLIP2	Q9UDT6	1046 aa		13.16	□□□□□ -0.3
ACSL1-203	ENST00000503407	SMC3	Q9UQE7	1217 aa		13.16	□□□□□ -0.3
ACSL1-203	ENST00000503407	ERBB3	P21860	1342 aa		13.16	□□□□□ -0.3
ACSL1-203	ENST00000503407	NWD1	Q149M9	1564 aa		13.16	□□□□□ -0.3
ACSL1-203	ENST00000503407	H2AFX	P16104	143 aa	Predicted RBP	13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	WAPL	Q7Z5K2	1190 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	FHOD1	Q9Y613	1164 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	CCDC61	Q9Y6R9	512 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	RAD50	Q92878	1312 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	HTATSF1	O43719	755 aa	Known RBP	13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	NEMF	O60524	1076 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	CHRM1	P11229	460 aa	Predicted RBP	13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	CDC25B	P30305	580 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	HSPA4	P34932	840 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	TNNT3	P45378	269 aa	Predicted RBP	13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	CCDC144B	Q3MJ40	725 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	ANO6	Q4KMQ2	910 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	MUM1L1	Q5H9M0	696 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	LRRC8A	Q8IWT6	810 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	CCDC144CP	Q8IYA2	1237 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	PHACTR3	Q96KR7	559 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	YY1AP1	Q9H869	796 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	CABP1	Q9NZU7	370 aa		13.15	□□□□□ -0.3
ACSL1-203	ENST00000503407	USP27X	A6NNY8	438 aa		13.14	□□□□□ -0.31
ACSL1-203	ENST00000503407	AEBP1	Q8IUX7	1158 aa		13.14	□□□□□ -0.31
ACSL1-203	ENST00000503407	GTF3C6	Q969F1	213 aa		13.14	□□□□□ -0.31
ACSL1-203	ENST00000503407	SALL3	Q9BXA9	1300 aa		13.14	□□□□□ -0.31
ACSL1-203	ENST00000503407	MSH6	P52701	1360 aa		13.14	□□□□□ -0.31
ACSL1-203	ENST00000503407	TEX35	Q5T0J7	233 aa		13.14	□□□□□ -0.31
ACSL1-203	ENST00000503407	ZFP91	Q96JP5	570 aa	Predicted RBP	13.14	□□□□□ -0.31
ACSL1-203	ENST00000503407	PTPRC	P08575	1304 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	CAMK4	Q16566	473 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	TSHZ3	Q63HK5	1081 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	TXLNB	Q8N3L3	684 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	RILPL2	Q969X0	211 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	NUDT16	Q96DE0	195 aa	Known RBP	13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	TTC14	Q96N46	770 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	MEIS3	Q99687	375 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	RASSF4	Q9H2L5	321 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	LIMCH1	Q9UPQ0	1083 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	MTMR6	Q9Y217	621 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	KIAA0232	Q92628	1395 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	PLA2G4A	P47712	749 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	KRT24	Q2M2I5	525 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	OVOS2	A0A0J9YW53	1432 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	OVOS2	Q6IE36	1432 aa		13.13	□□□□□ -0.31
ACSL1-203	ENST00000503407	PNMA6A	P0CW24	399 aa	Predicted RBP	13.12	□□□□□ -0.31
ACSL1-203	ENST00000503407	AK2	P54819	239 aa		13.12	□□□□□ -0.31
ACSL1-203	ENST00000503407	TNMD	Q9H2S6	317 aa		13.12	□□□□□ -0.31
ACSL1-203	ENST00000503407	RSPH14	Q9UHP6	348 aa		13.12	□□□□□ -0.31
ACSL1-203	ENST00000503407	PLEKHG3	A1L390	1219 aa		13.12	□□□□□ -0.31
ACSL1-203	ENST00000503407	KIF2A	O00139	706 aa	Predicted RBP	13.12	□□□□□ -0.31
ACSL1-203	ENST00000503407	LIG1	P18858	919 aa		13.12	□□□□□ -0.31
ACSL1-203	ENST00000503407	CKAP2L	Q8IYA6	745 aa		13.12	□□□□□ -0.31
ACSL1-203	ENST00000503407	USP6	P35125	1406 aa		13.12	□□□□□ -0.31
ACSL1-203	ENST00000503407	CLCN6	P51797	869 aa		13.11	□□□□□ -0.31
ACSL1-203	ENST00000503407	TPM4	P67936	248 aa		13.11	□□□□□ -0.31
ACSL1-203	ENST00000503407	RUFY3	Q7L099	469 aa		13.11	□□□□□ -0.31
ACSL1-203	ENST00000503407	FBXO41	Q8TF61	875 aa		13.11	□□□□□ -0.31
ACSL1-203	ENST00000503407	NPHP1	O15259	732 aa		13.11	□□□□□ -0.31
ACSL1-203	ENST00000503407	SKIL	P12757	684 aa		13.11	□□□□□ -0.31
ACSL1-203	ENST00000503407	GJB2	P29033	226 aa		13.11	□□□□□ -0.31
ACSL1-203	ENST00000503407	NOP2	P46087	812 aa	Known RBP	13.11	□□□□□ -0.31
ACSL1-203	ENST00000503407	ZNF165	P49910	485 aa		13.11	□□□□□ -0.31
ACSL1-203	ENST00000503407	ERCC6L	Q2NKX8	1250 aa		13.11	□□□□□ -0.31
ACSL1-203	ENST00000503407	RBM43	Q6ZSC3	357 aa	Known RBP	13.11	□□□□□ -0.31
ACSL1-203	ENST00000503407	TTC6	Q86TZ1	520 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms