RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 SCN4AP35499 1836 aa17.18■□□□□ 0.34
LMNA-218ENST00000502357 CNTNAP1P78357 1384 aa17.17■□□□□ 0.34
LMNA-218ENST00000502357 FOXN1O15353 648 aa17.17■□□□□ 0.34
LMNA-218ENST00000502357 TTC5Q8N0Z6 440 aa17.17■□□□□ 0.34
LMNA-218ENST00000502357 SNED1Q8TER0 1413 aa17.17■□□□□ 0.34
LMNA-218ENST00000502357 USP16Q9Y5T5 823 aa17.17■□□□□ 0.34
LMNA-218ENST00000502357 GNAT3A8MTJ3 354 aa17.16■□□□□ 0.34
LMNA-218ENST00000502357 CNKSR1Q969H4 720 aa17.16■□□□□ 0.34
LMNA-218ENST00000502357 MASTLQ96GX5 879 aa17.16■□□□□ 0.34
LMNA-218ENST00000502357 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
LMNA-218ENST00000502357 PRAMEF22A3QJZ6 481 aa17.15■□□□□ 0.34
LMNA-218ENST00000502357 CNBD1Q8NA66 436 aa17.15■□□□□ 0.34
LMNA-218ENST00000502357 TAF1DQ9H5J8 278 aaPredicted RBP17.15■□□□□ 0.34
LMNA-218ENST00000502357 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
LMNA-218ENST00000502357 SETDB2Q96T68 719 aa17.14■□□□□ 0.33
LMNA-218ENST00000502357 PCGF6Q9BYE7 350 aa17.14■□□□□ 0.33
LMNA-218ENST00000502357 ZNF541Q9H0D2 1346 aa17.14■□□□□ 0.33
LMNA-218ENST00000502357 NPC1L1Q9UHC9 1359 aa17.14■□□□□ 0.33
LMNA-218ENST00000502357 PIP4K2AP48426 406 aaPredicted RBP17.13■□□□□ 0.33
LMNA-218ENST00000502357 TEFQ10587 303 aa17.13■□□□□ 0.33
LMNA-218ENST00000502357 CC2D1BQ5T0F9 858 aaKnown RBP17.13■□□□□ 0.33
LMNA-218ENST00000502357 OLFM4Q6UX06 510 aa17.13■□□□□ 0.33
LMNA-218ENST00000502357 DZIP3Q86Y13 1208 aaKnown RBP17.13■□□□□ 0.33
LMNA-218ENST00000502357 GAS2L2Q8NHY3 880 aa17.13■□□□□ 0.33
LMNA-218ENST00000502357 VEGFBP49765 207 aa17.12■□□□□ 0.33
LMNA-218ENST00000502357 CLEC4GQ6UXB4 293 aa17.12■□□□□ 0.33
LMNA-218ENST00000502357 LDHDQ86WU2 507 aa17.12■□□□□ 0.33
LMNA-218ENST00000502357 ZNF330Q9Y3S2 320 aaPredicted RBP17.12■□□□□ 0.33
LMNA-218ENST00000502357 NBPF26B4DH59 902 aa17.11■□□□□ 0.33
LMNA-218ENST00000502357 SOGA3Q5TF21 947 aa17.11■□□□□ 0.33
LMNA-218ENST00000502357 NBPF10Q6P3W6 841 aaKnown RBP17.11■□□□□ 0.33
LMNA-218ENST00000502357 NBPF15Q8N660 670 aa17.11■□□□□ 0.33
LMNA-218ENST00000502357 PRDM10Q9NQV6 1147 aa17.11■□□□□ 0.33
LMNA-218ENST00000502357 ST5P78524 1137 aa17.1■□□□□ 0.33
LMNA-218ENST00000502357 RSPH6AQ9H0K4 717 aa17.1■□□□□ 0.33
LMNA-218ENST00000502357 WBP1LQ9NX94 342 aa17.1■□□□□ 0.33
LMNA-218ENST00000502357 COL4A5P29400 1685 aa17.1■□□□□ 0.33
LMNA-218ENST00000502357 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
LMNA-218ENST00000502357 BTBD11A6QL63 1104 aa17.09■□□□□ 0.33
LMNA-218ENST00000502357 FZD9O00144 591 aa17.09■□□□□ 0.33
LMNA-218ENST00000502357 FKBP4Q02790 459 aaKnown RBP eCLIP17.09■□□□□ 0.33
LMNA-218ENST00000502357 LTBP1Q14766 1721 aa17.09■□□□□ 0.33
LMNA-218ENST00000502357 TMEM88BA6NKF7 163 aa17.08■□□□□ 0.32
LMNA-218ENST00000502357 RGL2O15211 777 aa17.08■□□□□ 0.32
LMNA-218ENST00000502357 NPR1P16066 1061 aa17.08■□□□□ 0.32
LMNA-218ENST00000502357 CCDC93Q567U6 631 aa17.08■□□□□ 0.32
LMNA-218ENST00000502357 ZNF277Q9NRM2 450 aaPredicted RBP17.08■□□□□ 0.32
LMNA-218ENST00000502357 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
LMNA-218ENST00000502357 NBPF5PQ86XG9 351 aaPredicted RBP17.07■□□□□ 0.32
LMNA-218ENST00000502357 RASSF10A6NK89 507 aa17.06■□□□□ 0.32
LMNA-218ENST00000502357 PRKAR2BP31323 418 aa17.06■□□□□ 0.32
LMNA-218ENST00000502357 HLFQ16534 295 aa17.06■□□□□ 0.32
LMNA-218ENST00000502357 EPHX2P34913 555 aa17.05■□□□□ 0.32
LMNA-218ENST00000502357 CRY2Q49AN0 593 aa17.05■□□□□ 0.32
LMNA-218ENST00000502357 SLC51AQ86UW1 340 aa17.05■□□□□ 0.32
LMNA-218ENST00000502357 HACL1Q9UJ83 578 aa17.05■□□□□ 0.32
LMNA-218ENST00000502357 SNRPA1P09661 255 aaKnown RBP17.04■□□□□ 0.32
LMNA-218ENST00000502357 CTCFP49711 727 aaPredicted RBP17.04■□□□□ 0.32
LMNA-218ENST00000502357 THSD7BQ9C0I4 1608 aa17.03■□□□□ 0.32
LMNA-218ENST00000502357 RNF123Q5XPI4 1314 aa17.03■□□□□ 0.32
LMNA-218ENST00000502357 HSPA8P11142 646 aaKnown RBP17.03■□□□□ 0.32
LMNA-218ENST00000502357 IARSP41252 1262 aaKnown RBP17.03■□□□□ 0.32
LMNA-218ENST00000502357 MAP1SQ66K74 1059 aaPredicted RBP17.03■□□□□ 0.32
LMNA-218ENST00000502357 TPTE2Q6XPS3 522 aa17.03■□□□□ 0.32
LMNA-218ENST00000502357 MCM10Q7L590 875 aa17.03■□□□□ 0.32
LMNA-218ENST00000502357 RTKN2Q8IZC4 609 aa17.03■□□□□ 0.32
LMNA-218ENST00000502357 CNTROBQ8N137 903 aa17.03■□□□□ 0.32
LMNA-218ENST00000502357 SYNE4Q8N205 404 aa17.03■□□□□ 0.32
LMNA-218ENST00000502357 NIP7Q9Y221 180 aaKnown RBP eCLIP17.03■□□□□ 0.32
LMNA-218ENST00000502357 ABCC12Q96J65 1359 aa17.02■□□□□ 0.32
LMNA-218ENST00000502357 LBX1P52954 281 aa17.02■□□□□ 0.32
LMNA-218ENST00000502357 EAPPQ56P03 285 aaPredicted RBP17.02■□□□□ 0.32
LMNA-218ENST00000502357 PSMD1Q99460 953 aa17.02■□□□□ 0.32
LMNA-218ENST00000502357 NUP98P52948 1817 aa17.01■□□□□ 0.31
LMNA-218ENST00000502357 FMR1Q06787 632 aaKnown RBP eCLIP17.01■□□□□ 0.314e-8■■■□□ 15.4
LMNA-218ENST00000502357 DCTN1Q14203 1278 aa17.01■□□□□ 0.31
LMNA-218ENST00000502357 DEFB115Q30KQ5 88 aa17.01■□□□□ 0.31
LMNA-218ENST00000502357 GPC2Q8N158 579 aa17.01■□□□□ 0.31
LMNA-218ENST00000502357 WDR33Q9C0J8 1336 aaKnown RBP17■□□□□ 0.31
LMNA-218ENST00000502357 NPHP1O15259 732 aa17■□□□□ 0.31
LMNA-218ENST00000502357 PNMA8AQ86V59 439 aaPredicted RBP17■□□□□ 0.31
LMNA-218ENST00000502357 ZNF652Q9Y2D9 606 aa17■□□□□ 0.31
LMNA-218ENST00000502357 LAMB4A4D0S4 1761 aa17■□□□□ 0.31
LMNA-218ENST00000502357 RIC1Q4ADV7 1423 aa16.99■□□□□ 0.31
LMNA-218ENST00000502357 ALDH1B1P30837 517 aa16.99■□□□□ 0.31
LMNA-218ENST00000502357 HOXA10P31260 410 aaPredicted RBP16.99■□□□□ 0.31
LMNA-218ENST00000502357 SCNN1DP51172 638 aa16.99■□□□□ 0.31
LMNA-218ENST00000502357 FAM177BA6PVY3 158 aa16.98■□□□□ 0.31
LMNA-218ENST00000502357 NPM2Q86SE8 214 aaKnown RBP16.98■□□□□ 0.31
LMNA-218ENST00000502357 DDX21Q9NR30 783 aaKnown RBP eCLIP16.98■□□□□ 0.31
LMNA-218ENST00000502357 UBN2Q6ZU65 1347 aa16.97■□□□□ 0.31
LMNA-218ENST00000502357 KDM3BQ7LBC6 1761 aa16.97■□□□□ 0.31
LMNA-218ENST00000502357 HTATSF1O43719 755 aaKnown RBP16.97■□□□□ 0.31
LMNA-218ENST00000502357 EPS15P42566 896 aa16.97■□□□□ 0.31
LMNA-218ENST00000502357 CST9Q5W186 159 aa16.97■□□□□ 0.31
LMNA-218ENST00000502357 NUTM1Q86Y26 1132 aa16.97■□□□□ 0.31
LMNA-218ENST00000502357 ABHD8Q96I13 439 aa16.97■□□□□ 0.31
LMNA-218ENST00000502357 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
LMNA-218ENST00000502357 ERVV-1B6SEH8 477 aa16.96■□□□□ 0.31
LMNA-218ENST00000502357 C3orf67Q6ZVT6 689 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms