RNA–Protein interactions for RNA: ENST00000497559.1

TNRC6B-209, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 5

Gene TNRC6B, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-209ENST00000497559 NEUROD4Q9HD90 331 aa11.31□□□□□ -0.6
TNRC6B-209ENST00000497559 SERTM1A2A2V5 107 aa11.3□□□□□ -0.6
TNRC6B-209ENST00000497559 MDFIQ99750 246 aa11.3□□□□□ -0.6
TNRC6B-209ENST00000497559 GPC6Q9Y625 555 aaPredicted RBP11.3□□□□□ -0.6
TNRC6B-209ENST00000497559 TRIM50Q86XT4 487 aa11.29□□□□□ -0.6
TNRC6B-209ENST00000497559 ZBTB7BO15156 539 aaPredicted RBP11.28□□□□□ -0.6
TNRC6B-209ENST00000497559 SIN3BO75182 1162 aa11.28□□□□□ -0.6
TNRC6B-209ENST00000497559 SPATA31C1P0DKV0 1188 aa11.28□□□□□ -0.6
TNRC6B-209ENST00000497559 SH3PXD2AQ5TCZ1 1133 aa11.28□□□□□ -0.6
TNRC6B-209ENST00000497559 SFSWAPQ12872 951 aaKnown RBP11.27□□□□□ -0.61
TNRC6B-209ENST00000497559 TPCN2Q8NHX9 752 aa11.27□□□□□ -0.61
TNRC6B-209ENST00000497559 ADARB2-AS1A8MUL3 147 aa11.26□□□□□ -0.61
TNRC6B-209ENST00000497559 RAD21O60216 631 aa11.26□□□□□ -0.61
TNRC6B-209ENST00000497559 DOC2BQ14184 412 aa11.26□□□□□ -0.61
TNRC6B-209ENST00000497559 Q8N3U1 123 aa11.26□□□□□ -0.61
TNRC6B-209ENST00000497559 RHPN1Q8TCX5 695 aa11.26□□□□□ -0.61
TNRC6B-209ENST00000497559 SLC30A3Q99726 388 aa11.26□□□□□ -0.61
TNRC6B-209ENST00000497559 KIAA1024Q9UPX6 916 aa11.26□□□□□ -0.61
TNRC6B-209ENST00000497559 CCDC102BQ68D86 513 aa11.25□□□□□ -0.61
TNRC6B-209ENST00000497559 PLEKHM2Q8IWE5 1019 aa11.25□□□□□ -0.61
TNRC6B-209ENST00000497559 ADAMTS19Q8TE59 1207 aa11.25□□□□□ -0.61
TNRC6B-209ENST00000497559 SPDYE3A6NKU9 549 aa11.24□□□□□ -0.61
TNRC6B-209ENST00000497559 POM121CA8CG34 1229 aa11.24□□□□□ -0.61
TNRC6B-209ENST00000497559 GATA4P43694 442 aa11.24□□□□□ -0.61
TNRC6B-209ENST00000497559 ATP1A2P50993 1020 aa11.24□□□□□ -0.61
TNRC6B-209ENST00000497559 CLDN10P78369 228 aa11.24□□□□□ -0.61
TNRC6B-209ENST00000497559 C1orf53Q5VUE5 145 aa11.24□□□□□ -0.61
TNRC6B-209ENST00000497559 TSPAN10Q9H1Z9 355 aaPredicted RBP11.24□□□□□ -0.61
TNRC6B-209ENST00000497559 USP17L3A6NCW0 530 aa11.23□□□□□ -0.61
TNRC6B-209ENST00000497559 USP17L4A6NCW7 530 aa11.23□□□□□ -0.61
TNRC6B-209ENST00000497559 PSMA6P60900 246 aaKnown RBP11.23□□□□□ -0.61
TNRC6B-209ENST00000497559 USP17L2Q6R6M4 530 aa11.23□□□□□ -0.61
TNRC6B-209ENST00000497559 USP17L1Q7RTZ2 530 aa11.23□□□□□ -0.61
TNRC6B-209ENST00000497559 TNFRSF25Q93038 417 aa11.23□□□□□ -0.61
TNRC6B-209ENST00000497559 M0R082 166 aa11.22□□□□□ -0.61
TNRC6B-209ENST00000497559 ITGB7P26010 798 aa11.22□□□□□ -0.61
TNRC6B-209ENST00000497559 HIRAP54198 1017 aaPredicted RBP11.22□□□□□ -0.61
TNRC6B-209ENST00000497559 SPEM2Q0P670 501 aa11.22□□□□□ -0.61
TNRC6B-209ENST00000497559 ZNF417Q8TAU3 575 aa11.22□□□□□ -0.61
TNRC6B-209ENST00000497559 ZNF587Q96SQ5 575 aaPredicted RBP11.22□□□□□ -0.61
TNRC6B-209ENST00000497559 SEMA6BQ9H3T3 888 aa11.22□□□□□ -0.61
TNRC6B-209ENST00000497559 STARD13Q9Y3M8 1113 aa11.22□□□□□ -0.61
TNRC6B-209ENST00000497559 HCN4Q9Y3Q4 1203 aa11.22□□□□□ -0.61
TNRC6B-209ENST00000497559 PRRT3Q5FWE3 981 aa11.21□□□□□ -0.61
TNRC6B-209ENST00000497559 HDGFL1Q5TGJ6 251 aa11.21□□□□□ -0.61
TNRC6B-209ENST00000497559 ANKIB1Q9P2G1 1089 aa11.21□□□□□ -0.61
TNRC6B-209ENST00000497559 CHMP3Q9Y3E7 222 aa11.21□□□□□ -0.61
TNRC6B-209ENST00000497559 NEUROD1Q13562 356 aa11.2□□□□□ -0.62
TNRC6B-209ENST00000497559 COL9A3Q14050 684 aaPredicted RBP11.2□□□□□ -0.62
TNRC6B-209ENST00000497559 POTEAQ6S8J7 498 aa11.2□□□□□ -0.62
TNRC6B-209ENST00000497559 LARGE2Q8N3Y3 721 aa11.2□□□□□ -0.62
TNRC6B-209ENST00000497559 HSH2DQ96JZ2 352 aa11.2□□□□□ -0.62
TNRC6B-209ENST00000497559 CEP63Q96MT8 703 aa11.2□□□□□ -0.62
TNRC6B-209ENST00000497559 UCN2Q96RP3 112 aa11.2□□□□□ -0.62
TNRC6B-209ENST00000497559 PHACTR1Q9C0D0 580 aa11.2□□□□□ -0.62
TNRC6B-209ENST00000497559 BRD7Q9NPI1 651 aa11.2□□□□□ -0.62
TNRC6B-209ENST00000497559 PRDM6Q9NQX0 595 aa11.2□□□□□ -0.62
TNRC6B-209ENST00000497559 SFI1A8K8P3 1242 aa11.19□□□□□ -0.62
TNRC6B-209ENST00000497559 M0R2N6 131 aa11.19□□□□□ -0.62
TNRC6B-209ENST00000497559 ATP9BO43861 1147 aa11.19□□□□□ -0.62
TNRC6B-209ENST00000497559 RAB44Q7Z6P3 723 aaPredicted RBP11.19□□□□□ -0.62
TNRC6B-209ENST00000497559 MICALL1Q8N3F8 863 aa11.19□□□□□ -0.62
TNRC6B-209ENST00000497559 OGFOD1Q8N543 542 aa11.19□□□□□ -0.62
TNRC6B-209ENST00000497559 PALM3A6NDB9 673 aaPredicted RBP11.18□□□□□ -0.62
TNRC6B-209ENST00000497559 ALBP02768 609 aa11.18□□□□□ -0.62
TNRC6B-209ENST00000497559 UBTFP17480 764 aaKnown RBP11.18□□□□□ -0.62
TNRC6B-209ENST00000497559 ADH7P40394 386 aa11.18□□□□□ -0.62
TNRC6B-209ENST00000497559 KCNQ4P56696 695 aa11.18□□□□□ -0.62
TNRC6B-209ENST00000497559 C8orf86Q6ZUL3 223 aa11.18□□□□□ -0.62
TNRC6B-209ENST00000497559 ZNF280CQ8ND82 737 aa11.18□□□□□ -0.62
TNRC6B-209ENST00000497559 MKRN1Q9UHC7 482 aaKnown RBP11.18□□□□□ -0.62
TNRC6B-209ENST00000497559 APBA3O96018 575 aa11.17□□□□□ -0.62
TNRC6B-209ENST00000497559 FLIIQ13045 1269 aa11.17□□□□□ -0.62
TNRC6B-209ENST00000497559 TSEN2Q8NCE0 465 aaKnown RBP11.17□□□□□ -0.62
TNRC6B-209ENST00000497559 SUSD3Q96L08 255 aa11.17□□□□□ -0.62
TNRC6B-209ENST00000497559 KCNH4Q9UQ05 1017 aa11.17□□□□□ -0.62
TNRC6B-209ENST00000497559 FAM229AH3BQW9 127 aa11.16□□□□□ -0.62
TNRC6B-209ENST00000497559 PRKCSHP14314 528 aaPredicted RBP11.15□□□□□ -0.62
TNRC6B-209ENST00000497559 TYRO3Q06418 890 aa11.15□□□□□ -0.62
TNRC6B-209ENST00000497559 TRIM28Q13263 835 aaKnown RBP11.15□□□□□ -0.62
TNRC6B-209ENST00000497559 SIX5Q8N196 739 aa11.15□□□□□ -0.62
TNRC6B-209ENST00000497559 C21orf2O43822 256 aa11.14□□□□□ -0.63
TNRC6B-209ENST00000497559 PPP1R12BO60237 982 aaPredicted RBP11.14□□□□□ -0.63
TNRC6B-209ENST00000497559 C20orf204Q6ZNR8 217 aa11.14□□□□□ -0.63
TNRC6B-209ENST00000497559 ZNF594Q96JF6 807 aaPredicted RBP11.14□□□□□ -0.63
TNRC6B-209ENST00000497559 RBM19Q9Y4C8 960 aaKnown RBP11.14□□□□□ -0.63
TNRC6B-209ENST00000497559 DKK1O94907 266 aa11.13□□□□□ -0.63
TNRC6B-209ENST00000497559 NID1P14543 1247 aa11.13□□□□□ -0.63
TNRC6B-209ENST00000497559 RSPO4Q2I0M5 234 aaPredicted RBP11.13□□□□□ -0.63
TNRC6B-209ENST00000497559 NKAPLQ5M9Q1 402 aa11.12□□□□□ -0.63
TNRC6B-209ENST00000497559 ALDH16A1Q8IZ83 802 aa11.12□□□□□ -0.63
TNRC6B-209ENST00000497559 BHMTQ93088 406 aa11.12□□□□□ -0.63
TNRC6B-209ENST00000497559 TPSG1Q9NRR2 321 aa11.12□□□□□ -0.63
TNRC6B-209ENST00000497559 NACC1Q96RE7 527 aa11.11□□□□□ -0.63
TNRC6B-209ENST00000497559 ATAD2Q6PL18 1390 aa11.11□□□□□ -0.63
TNRC6B-209ENST00000497559 GRIK4Q16099 956 aa11.1□□□□□ -0.63
TNRC6B-209ENST00000497559 ZMYM1Q5SVZ6 1142 aa11.1□□□□□ -0.63
TNRC6B-209ENST00000497559 BTLAQ7Z6A9 289 aa11.1□□□□□ -0.63
TNRC6B-209ENST00000497559 STAG2Q8N3U4 1231 aa11.1□□□□□ -0.63
TNRC6B-209ENST00000497559 LILRB5O75023 590 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms