RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 NPHP4O75161 1426 aaPredicted RBP3.7□□□□□ -1.82
CKS1BP2-201ENST00000497342 AATKQ6ZMQ8 1374 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 SFI1A8K8P3 1242 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 APLP1P51693 650 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 FANCCQ00597 558 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 RBL2Q08999 1139 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 NBPF20Q3BBV1 942 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 JMYQ8N9B5 988 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 TPCN2Q8NHX9 752 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 MYO19Q96H55 970 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 PRIMPOLQ96LW4 560 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 SLC4A9Q96Q91 983 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 UNC93B1Q9H1C4 597 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 PPP1R1BQ9UD71 204 aaPredicted RBP3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 MAP4K5Q9Y4K4 846 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 SUPT6HQ7KZ85 1726 aaKnown RBP3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 MYO3AQ8NEV4 1616 aa3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.69□□□□□ -1.82
CKS1BP2-201ENST00000497342 KDM5CP41229 1560 aa3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 A2ML1A8K2U0 1454 aa3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 XIRP1Q702N8 1843 aaKnown RBP3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 POLR1AO95602 1720 aaPredicted RBP3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 POTECB2RU33 542 aa3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 TMEM229AB2RXF0 380 aa3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 NCLP19338 710 aaKnown RBP3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 ERCC5P28715 1186 aaPredicted RBP3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 HIRAP54198 1017 aaPredicted RBP3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 ERVK-9P63128 1117 aa3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 FOXK2Q01167 660 aa3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 PTPN12Q05209 780 aaKnown RBP3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 DZIP3Q86Y13 1208 aaKnown RBP3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 FBF1Q8TES7 1133 aa3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 FRMD6Q96NE9 622 aa3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 TSR3Q9UJK0 312 aaKnown RBP3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 KDM5DQ9BY66 1539 aa3.68□□□□□ -1.82
CKS1BP2-201ENST00000497342 LRRC9Q6ZRR7 1453 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 DNMT1P26358 1616 aaKnown RBP3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 TNFRSF10BO14763 440 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 FZD6O60353 706 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 ABL1P00519 1130 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 CTHP32929 405 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 SCNN1DP51172 638 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 MTFR1Q15390 333 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 TSNAXIP1Q2TAA8 658 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 C4orf48Q5BLP8 95 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 ALKBH2Q6NS38 261 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 NYAP1Q6ZVC0 841 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 ZBTB33Q86T24 672 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 BPHLQ86WA6 291 aaPredicted RBP3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 GJD3Q8N144 294 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 MPNDQ8N594 471 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 SPSB2Q99619 263 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 ZNF358Q9NW07 568 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 TRPC5Q9UL62 973 aaPredicted RBP3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 RBM19Q9Y4C8 960 aaKnown RBP3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 PCDHB3Q9Y5E6 796 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 SHPRHQ149N8 1683 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 PITPNM2Q9BZ72 1349 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 ATP10BO94823 1461 aa3.67□□□□□ -1.82
CKS1BP2-201ENST00000497342 FAM83GA6ND36 823 aa3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 NDUFB5O43674 189 aa3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 SMARCA5O60264 1052 aaPredicted RBP3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 ADH1BP00325 375 aa3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 BAG6P46379 1132 aa3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 MLLT1Q03111 559 aaPredicted RBP3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 EHHADHQ08426 723 aa3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 PDE3BQ13370 1112 aa3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 ENOX2Q16206 610 aaKnown RBP3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 PTCRAQ6ISU1 281 aaPredicted RBP3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 GIMAP6Q6P9H5 292 aa3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 CAPN12Q6ZSI9 719 aa3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 DPH6Q7L8W6 267 aa3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 MRPL50Q8N5N7 158 aaKnown RBP3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 TSEN2Q8NCE0 465 aaKnown RBP3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 PURBQ96QR8 312 aaKnown RBP3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 SPON1Q9HCB6 807 aa3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 RALGAPBQ86X10 1494 aa3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 GOLGB1Q14789 3259 aaKnown RBP3.66□□□□□ -1.82
CKS1BP2-201ENST00000497342 TMEM94Q12767 1356 aa3.65□□□□□ -1.82
CKS1BP2-201ENST00000497342 TNRC18O15417 2968 aaPredicted RBP3.65□□□□□ -1.82
CKS1BP2-201ENST00000497342 SCAPERQ9BY12 1400 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 BACH1O14867 736 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 GPR182O15218 404 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 SORBS3O60504 671 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 RGS19P49795 217 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 OXLD1Q5BKU9 147 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 SOGA3Q5TF21 947 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 ALG1LQ6GMV1 187 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 C16orf46Q6P387 395 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 NT5DC4Q86YG4 428 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 ANKRD13AQ8IZ07 590 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 ZNF295-AS1Q8N0V1 137 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 ZNF511Q8NB15 262 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 RNF34Q969K3 372 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 C2orf49Q9BVC5 232 aaPredicted RBP3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 CFHR5Q9BXR6 569 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 BRINP2Q9C0B6 783 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 PARP2Q9UGN5 583 aa3.65□□□□□ -1.83
CKS1BP2-201ENST00000497342 TBX22Q9Y458 520 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms