RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 MAP3K15Q6ZN16 1313 aa20.27■□□□□ 0.83
PMF1-205ENST00000497069 DDX58O95786 925 aaKnown RBP20.26■□□□□ 0.83
PMF1-205ENST00000497069 ZBTB3Q9H5J0 574 aa20.26■□□□□ 0.83
PMF1-205ENST00000497069 SMC4Q9NTJ3 1288 aa20.26■□□□□ 0.83
PMF1-205ENST00000497069 ATF5Q9Y2D1 282 aaPredicted RBP20.26■□□□□ 0.83
PMF1-205ENST00000497069 ERVV-1B6SEH8 477 aa20.25■□□□□ 0.83
PMF1-205ENST00000497069 POLD1P28340 1107 aa20.25■□□□□ 0.83
PMF1-205ENST00000497069 SSH1Q8WYL5 1049 aa20.25■□□□□ 0.83
PMF1-205ENST00000497069 SPON1Q9HCB6 807 aa20.25■□□□□ 0.83
PMF1-205ENST00000497069 RGL2O15211 777 aa20.24■□□□□ 0.83
PMF1-205ENST00000497069 FKBP8Q14318 412 aa20.24■□□□□ 0.83
PMF1-205ENST00000497069 CLEC4GQ6UXB4 293 aa20.24■□□□□ 0.83
PMF1-205ENST00000497069 ANKRD13DQ6ZTN6 518 aa20.24■□□□□ 0.83
PMF1-205ENST00000497069 RARSP54136 660 aaKnown RBP20.23■□□□□ 0.83
PMF1-205ENST00000497069 FLIIQ13045 1269 aa20.23■□□□□ 0.83
PMF1-205ENST00000497069 RIC3Q7Z5B4 369 aa20.23■□□□□ 0.83
PMF1-205ENST00000497069 MRPL50Q8N5N7 158 aaKnown RBP20.23■□□□□ 0.83
PMF1-205ENST00000497069 PLBD2Q8NHP8 589 aa20.23■□□□□ 0.83
PMF1-205ENST00000497069 BCL2L13Q9BXK5 485 aa20.23■□□□□ 0.83
PMF1-205ENST00000497069 BCL2L12Q9HB09 334 aa20.23■□□□□ 0.83
PMF1-205ENST00000497069 FKBP5Q13451 457 aaPredicted RBP20.22■□□□□ 0.83
PMF1-205ENST00000497069 G2E3Q7L622 706 aa20.22■□□□□ 0.83
PMF1-205ENST00000497069 SCN7AQ01118 1682 aa20.22■□□□□ 0.83
PMF1-205ENST00000497069 HLFQ16534 295 aa20.21■□□□□ 0.83
PMF1-205ENST00000497069 HSP90AB3PQ58FF7 597 aa20.21■□□□□ 0.83
PMF1-205ENST00000497069 GIGYF2Q6Y7W6 1299 aaKnown RBP20.21■□□□□ 0.83
PMF1-205ENST00000497069 BICDL1Q6ZP65 573 aa20.21■□□□□ 0.83
PMF1-205ENST00000497069 MMP10P09238 476 aa20.2■□□□□ 0.82
PMF1-205ENST00000497069 SETDB2Q96T68 719 aa20.2■□□□□ 0.82
PMF1-205ENST00000497069 PARP3Q9Y6F1 533 aa20.2■□□□□ 0.82
PMF1-205ENST00000497069 BCORQ6W2J9 1755 aa20.19■□□□□ 0.82
PMF1-205ENST00000497069 TBC1D9BQ66K14 1250 aa20.19■□□□□ 0.82
PMF1-205ENST00000497069 KSR2Q6VAB6 950 aa20.19■□□□□ 0.82
PMF1-205ENST00000497069 NIP7Q9Y221 180 aaKnown RBP eCLIP20.19■□□□□ 0.827e-6■■■■■ 33.4
PMF1-205ENST00000497069 PI4KAP2A4QPH2 592 aa20.18■□□□□ 0.82
PMF1-205ENST00000497069 NFIXQ14938 502 aa20.18■□□□□ 0.82
PMF1-205ENST00000497069 PI4KAP1Q8N8J0 262 aa20.18■□□□□ 0.82
PMF1-205ENST00000497069 MAP3K2Q9Y2U5 619 aa20.18■□□□□ 0.82
PMF1-205ENST00000497069 PTPRCP08575 1304 aa20.18■□□□□ 0.82
PMF1-205ENST00000497069 KIF16BQ96L93 1317 aa20.18■□□□□ 0.82
PMF1-205ENST00000497069 TM4SF1P30408 202 aa20.17■□□□□ 0.82
PMF1-205ENST00000497069 NPHP1O15259 732 aa20.16■□□□□ 0.82
PMF1-205ENST00000497069 GPTP24298 496 aa20.16■□□□□ 0.82
PMF1-205ENST00000497069 PTGER2P43116 358 aa20.16■□□□□ 0.82
PMF1-205ENST00000497069 NEXNQ0ZGT2 675 aa20.16■□□□□ 0.82
PMF1-205ENST00000497069 TCIRG1Q13488 830 aa20.16■□□□□ 0.82
PMF1-205ENST00000497069 CARMIL3Q8ND23 1372 aa20.16■□□□□ 0.82
PMF1-205ENST00000497069 ATP10DQ9P241 1426 aa20.16■□□□□ 0.82
PMF1-205ENST00000497069 BCAR3O75815 825 aa20.15■□□□□ 0.82
PMF1-205ENST00000497069 BRPF1P55201 1214 aaPredicted RBP20.15■□□□□ 0.82
PMF1-205ENST00000497069 DNAAF4Q8WXU2 420 aa20.15■□□□□ 0.82
PMF1-205ENST00000497069 MYD88Q99836 296 aa20.15■□□□□ 0.82
PMF1-205ENST00000497069 METTL22Q9BUU2 404 aaPredicted RBP20.15■□□□□ 0.82
PMF1-205ENST00000497069 PPP1R1BQ9UD71 204 aaPredicted RBP20.15■□□□□ 0.82
PMF1-205ENST00000497069 RCAN3Q9UKA8 241 aa20.15■□□□□ 0.82
PMF1-205ENST00000497069 NOB1Q9ULX3 412 aaKnown RBP20.15■□□□□ 0.82
PMF1-205ENST00000497069 CACNA1FO60840 1977 aa20.14■□□□□ 0.81
PMF1-205ENST00000497069 ADCY9O60503 1353 aa20.14■□□□□ 0.81
PMF1-205ENST00000497069 POLRMTO00411 1230 aaKnown RBP20.14■□□□□ 0.81
PMF1-205ENST00000497069 IPO8O15397 1037 aaKnown RBP20.14■□□□□ 0.81
PMF1-205ENST00000497069 SERPINB2P05120 415 aa20.14■□□□□ 0.81
PMF1-205ENST00000497069 DDR1Q08345 913 aa20.14■□□□□ 0.81
PMF1-205ENST00000497069 PARP10Q53GL7 1025 aa20.14■□□□□ 0.81
PMF1-205ENST00000497069 ZNF34Q8IZ26 560 aa20.14■□□□□ 0.81
PMF1-205ENST00000497069 FRAT1Q92837 279 aaPredicted RBP20.14■□□□□ 0.81
PMF1-205ENST00000497069 SGIP1Q9BQI5 828 aa20.14■□□□□ 0.81
PMF1-205ENST00000497069 FAM177BA6PVY3 158 aa20.13■□□□□ 0.81
PMF1-205ENST00000497069 NBPF5PQ86XG9 351 aaPredicted RBP20.13■□□□□ 0.81
PMF1-205ENST00000497069 F6X3S4 739 aa20.12■□□□□ 0.81
PMF1-205ENST00000497069 ATP5J2-PTCD1G3V325 749 aa20.12■□□□□ 0.81
PMF1-205ENST00000497069 GTF2E1P29083 439 aaPredicted RBP20.12■□□□□ 0.81
PMF1-205ENST00000497069 PPP1R42Q7Z4L9 355 aa20.12■□□□□ 0.81
PMF1-205ENST00000497069 API5Q9BZZ5 524 aaKnown RBP20.12■□□□□ 0.81
PMF1-205ENST00000497069 NYXQ9GZU5 481 aa20.12■□□□□ 0.81
PMF1-205ENST00000497069 ARFGEF2Q9Y6D5 1785 aa20.11■□□□□ 0.81
PMF1-205ENST00000497069 SLC4A10Q6U841 1118 aa20.11■□□□□ 0.81
PMF1-205ENST00000497069 TPTE2Q6XPS3 522 aa20.11■□□□□ 0.81
PMF1-205ENST00000497069 ARHGAP45Q92619 1136 aa20.11■□□□□ 0.81
PMF1-205ENST00000497069 ISCA1Q9BUE6 129 aa20.11■□□□□ 0.81
PMF1-205ENST00000497069 NUP98P52948 1817 aa20.11■□□□□ 0.81
PMF1-205ENST00000497069 COL24A1Q17RW2 1714 aa20.1■□□□□ 0.81
PMF1-205ENST00000497069 UBN2Q6ZU65 1347 aa20.1■□□□□ 0.81
PMF1-205ENST00000497069 TRIM28Q13263 835 aaKnown RBP20.1■□□□□ 0.81
PMF1-205ENST00000497069 NLRP10Q86W26 655 aa20.1■□□□□ 0.81
PMF1-205ENST00000497069 KLHL34Q8N239 644 aa20.1■□□□□ 0.81
PMF1-205ENST00000497069 CNBD1Q8NA66 436 aa20.1■□□□□ 0.81
PMF1-205ENST00000497069 ST5P78524 1137 aa20.09■□□□□ 0.81
PMF1-205ENST00000497069 SUSD4Q5VX71 490 aa20.09■□□□□ 0.81
PMF1-205ENST00000497069 ZKSCAN2Q63HK3 967 aa20.09■□□□□ 0.81
PMF1-205ENST00000497069 CCDC191Q8NCU4 936 aa20.09■□□□□ 0.81
PMF1-205ENST00000497069 LINS1Q8NG48 757 aa20.09■□□□□ 0.81
PMF1-205ENST00000497069 UTP14AQ9BVJ6 771 aaKnown RBP20.09■□□□□ 0.81
PMF1-205ENST00000497069 CWC25Q9NXE8 425 aaPredicted RBP20.09■□□□□ 0.81
PMF1-205ENST00000497069 TRMT112Q9UI30 125 aaKnown RBP20.08■□□□□ 0.81
PMF1-205ENST00000497069 IBTKQ9P2D0 1353 aaPredicted RBP20.08■□□□□ 0.8
PMF1-205ENST00000497069 PRR5LQ6MZQ0 368 aa20.07■□□□□ 0.8
PMF1-205ENST00000497069 ATF7IPQ6VMQ6 1270 aa20.07■□□□□ 0.8
PMF1-205ENST00000497069 SRCIN1Q9C0H9 1055 aa20.07■□□□□ 0.8
PMF1-205ENST00000497069 ANKRD36CQ5JPF3 1778 aa20.07■□□□□ 0.8
PMF1-205ENST00000497069 RNF123Q5XPI4 1314 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms