RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 NBPF10Q6P3W6 841 aaKnown RBP15.46■□□□□ 0.07
APTX-233ENST00000496030 NBPF15Q8N660 670 aa15.46■□□□□ 0.07
APTX-233ENST00000496030 SMC1BQ8NDV3 1235 aa15.46■□□□□ 0.07
APTX-233ENST00000496030 ZBTB1Q9Y2K1 713 aa15.46■□□□□ 0.07
APTX-233ENST00000496030 FANCIQ9NVI1 1328 aa15.45■□□□□ 0.06
APTX-233ENST00000496030 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
APTX-233ENST00000496030 SOS1Q07889 1333 aaPredicted RBP15.44■□□□□ 0.06
APTX-233ENST00000496030 EIF5P55010 431 aaKnown RBP15.44■□□□□ 0.06
APTX-233ENST00000496030 HNRNPUQ00839 825 aaKnown RBP eCLIP15.44■□□□□ 0.06
APTX-233ENST00000496030 SLFN5Q08AF3 891 aa15.44■□□□□ 0.06
APTX-233ENST00000496030 DUSP27Q5VZP5 1158 aa15.44■□□□□ 0.06
APTX-233ENST00000496030 TRMT2AQ8IZ69 625 aaKnown RBP15.44■□□□□ 0.06
APTX-233ENST00000496030 NLGN1Q8N2Q7 840 aa15.44■□□□□ 0.06
APTX-233ENST00000496030 TSPYL6Q8N831 410 aa15.44■□□□□ 0.06
APTX-233ENST00000496030 LAMB4A4D0S4 1761 aa15.44■□□□□ 0.06
APTX-233ENST00000496030 GYS1P13807 737 aa15.43■□□□□ 0.06
APTX-233ENST00000496030 PIP4K2AP48426 406 aaPredicted RBP15.43■□□□□ 0.06
APTX-233ENST00000496030 GOLGA2Q08379 1002 aa15.43■□□□□ 0.06
APTX-233ENST00000496030 PDIA6Q15084 440 aa15.43■□□□□ 0.06
APTX-233ENST00000496030 ARHGEF1Q92888 912 aaKnown RBP15.43■□□□□ 0.06
APTX-233ENST00000496030 RTCBQ9Y3I0 505 aaKnown RBP15.43■□□□□ 0.06
APTX-233ENST00000496030 ELL2O00472 640 aaPredicted RBP15.42■□□□□ 0.06
APTX-233ENST00000496030 HOXB7P09629 217 aa15.42■□□□□ 0.06
APTX-233ENST00000496030 CANXP27824 592 aaKnown RBP15.42■□□□□ 0.06
APTX-233ENST00000496030 TRAPPC3LQ5T215 181 aa15.42■□□□□ 0.06
APTX-233ENST00000496030 LRP10Q7Z4F1 713 aa15.42■□□□□ 0.06
APTX-233ENST00000496030 ADRA2BP18089 450 aa15.41■□□□□ 0.06
APTX-233ENST00000496030 IL6STP40189 918 aaPredicted RBP15.41■□□□□ 0.06
APTX-233ENST00000496030 EXOSC9Q06265 439 aaKnown RBP15.41■□□□□ 0.06
APTX-233ENST00000496030 MYH16Q9H6N6 1097 aa15.41■□□□□ 0.06
APTX-233ENST00000496030 PIM2Q9P1W9 311 aa15.41■□□□□ 0.06
APTX-233ENST00000496030 E9PSI1 815 aa15.4■□□□□ 0.06
APTX-233ENST00000496030 EIF2S2P20042 333 aaKnown RBP15.4■□□□□ 0.06
APTX-233ENST00000496030 PROSER3Q2NL68 480 aa15.4■□□□□ 0.06
APTX-233ENST00000496030 DALRD3Q5D0E6 543 aaKnown RBP15.4■□□□□ 0.06
APTX-233ENST00000496030 PARP3Q9Y6F1 533 aa15.4■□□□□ 0.06
APTX-233ENST00000496030 CHRNA5P30532 468 aa15.39■□□□□ 0.05
APTX-233ENST00000496030 RASSF7Q02833 373 aa15.39■□□□□ 0.05
APTX-233ENST00000496030 NECTIN2Q92692 538 aa15.39■□□□□ 0.05
APTX-233ENST00000496030 ERBB4Q15303 1308 aa15.39■□□□□ 0.05
APTX-233ENST00000496030 COL15A1P39059 1388 aa15.38■□□□□ 0.05
APTX-233ENST00000496030 CCDC88AQ3V6T2 1871 aa15.38■□□□□ 0.05
APTX-233ENST00000496030 VAMP4O75379 141 aa15.38■□□□□ 0.05
APTX-233ENST00000496030 TWISTNBQ3B726 338 aaPredicted RBP15.38■□□□□ 0.05
APTX-233ENST00000496030 HDGFL1Q5TGJ6 251 aa15.38■□□□□ 0.05
APTX-233ENST00000496030 SRP68Q9UHB9 627 aaKnown RBP15.38■□□□□ 0.05
APTX-233ENST00000496030 ZBED9Q6R2W3 1325 aa15.38■□□□□ 0.05
APTX-233ENST00000496030 ANXA1P04083 346 aa15.37■□□□□ 0.05
APTX-233ENST00000496030 RFC4P35249 363 aa15.37■□□□□ 0.05
APTX-233ENST00000496030 BCL2L12Q9HB09 334 aa15.37■□□□□ 0.05
APTX-233ENST00000496030 NARFQ9UHQ1 456 aa15.37■□□□□ 0.05
APTX-233ENST00000496030 USP42Q9H9J4 1324 aaKnown RBP15.37■□□□□ 0.05
APTX-233ENST00000496030 TIAM2Q8IVF5 1701 aa15.37■□□□□ 0.05
APTX-233ENST00000496030 MYL6BP14649 208 aa15.36■□□□□ 0.05
APTX-233ENST00000496030 DDR1Q08345 913 aa15.36■□□□□ 0.05
APTX-233ENST00000496030 DDX21Q9NR30 783 aaKnown RBP eCLIP15.36■□□□□ 0.05
APTX-233ENST00000496030 CHPF2Q9P2E5 772 aa15.36■□□□□ 0.05
APTX-233ENST00000496030 TBC1D2BQ9UPU7 963 aa15.36■□□□□ 0.05
APTX-233ENST00000496030 A0A087WZG4 1122 aa15.35■□□□□ 0.05
APTX-233ENST00000496030 CAMTA2O94983 1202 aa15.35■□□□□ 0.05
APTX-233ENST00000496030 VEGFAP15692 232 aaPredicted RBP15.35■□□□□ 0.05
APTX-233ENST00000496030 TTLL7Q6ZT98 887 aa15.35■□□□□ 0.05
APTX-233ENST00000496030 GLTPD2A6NH11 291 aa15.34■□□□□ 0.05
APTX-233ENST00000496030 FOXN1O15353 648 aa15.34■□□□□ 0.05
APTX-233ENST00000496030 FKBP8Q14318 412 aa15.34■□□□□ 0.05
APTX-233ENST00000496030 USPL1Q5W0Q7 1092 aa15.34■□□□□ 0.05
APTX-233ENST00000496030 DBF4Q9UBU7 674 aaPredicted RBP15.34■□□□□ 0.05
APTX-233ENST00000496030 ZNF330Q9Y3S2 320 aaPredicted RBP15.34■□□□□ 0.05
APTX-233ENST00000496030 POTECB2RU33 542 aa15.33■□□□□ 0.04
APTX-233ENST00000496030 TCERG1O14776 1098 aaKnown RBP15.33■□□□□ 0.04
APTX-233ENST00000496030 CCDC30Q5VVM6 783 aa15.33■□□□□ 0.04
APTX-233ENST00000496030 DZIP3Q86Y13 1208 aaKnown RBP15.33■□□□□ 0.04
APTX-233ENST00000496030 MKRN1Q9UHC7 482 aaKnown RBP15.33■□□□□ 0.04
APTX-233ENST00000496030 ZPR1O75312 459 aa15.32■□□□□ 0.04
APTX-233ENST00000496030 TM4SF1P30408 202 aa15.32■□□□□ 0.04
APTX-233ENST00000496030 COPS6Q7L5N1 327 aa15.32■□□□□ 0.04
APTX-233ENST00000496030 XAGE3Q8WTP9 111 aa15.32■□□□□ 0.04
APTX-233ENST00000496030 ZC3H4Q9UPT8 1303 aaKnown RBP15.32■□□□□ 0.04
APTX-233ENST00000496030 AFDNP55196 1824 aaKnown RBP15.31■□□□□ 0.04
APTX-233ENST00000496030 HLFQ16534 295 aa15.31■□□□□ 0.04
APTX-233ENST00000496030 PHAXQ9H814 394 aaKnown RBP15.31■□□□□ 0.04
APTX-233ENST00000496030 HYPKQ9NX55 129 aa15.31■□□□□ 0.04
APTX-233ENST00000496030 SCN7AQ01118 1682 aa15.31■□□□□ 0.04
APTX-233ENST00000496030 BCORQ6W2J9 1755 aa15.31■□□□□ 0.04
APTX-233ENST00000496030 DLEC1Q9Y238 1755 aa15.31■□□□□ 0.04
APTX-233ENST00000496030 RGL2O15211 777 aa15.3■□□□□ 0.04
APTX-233ENST00000496030 LMNB1P20700 586 aa15.3■□□□□ 0.04
APTX-233ENST00000496030 MAP3K15Q6ZN16 1313 aa15.3■□□□□ 0.04
APTX-233ENST00000496030 G2E3Q7L622 706 aa15.3■□□□□ 0.04
APTX-233ENST00000496030 CHMP4AQ9BY43 222 aa15.3■□□□□ 0.04
APTX-233ENST00000496030 CACNA1FO60840 1977 aa15.29■□□□□ 0.04
APTX-233ENST00000496030 ERVV-1B6SEH8 477 aa15.29■□□□□ 0.04
APTX-233ENST00000496030 POLRMTO00411 1230 aaKnown RBP15.29■□□□□ 0.04
APTX-233ENST00000496030 SLC4A2P04920 1241 aa15.29■□□□□ 0.04
APTX-233ENST00000496030 NFIXQ14938 502 aa15.29■□□□□ 0.04
APTX-233ENST00000496030 CLEC4GQ6UXB4 293 aa15.29■□□□□ 0.04
APTX-233ENST00000496030 NUP98P52948 1817 aa15.29■□□□□ 0.04
APTX-233ENST00000496030 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
APTX-233ENST00000496030 FAM161AQ3B820 660 aa15.28■□□□□ 0.04
APTX-233ENST00000496030 TBC1D9BQ66K14 1250 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms