RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 TRIM55Q9BYV6 548 aa5.93□□□□□ -1.46
NF1-216ENST00000495910 CACYBPQ9HB71 228 aaKnown RBP5.93□□□□□ -1.46
NF1-216ENST00000495910 ZBTB12Q9Y330 459 aaPredicted RBP5.93□□□□□ -1.46
NF1-216ENST00000495910 CTAGE15A4D2H0 777 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 CTAGE8P0CG41 777 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 PRPHP41219 470 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 CTAGE4Q8IX94 777 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 NACAP1Q9BZK3 213 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 K7ELQ4 463 aaPredicted RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 WDR46O15213 610 aaKnown RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 GIGYF1O75420 1035 aaPredicted RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 GFAPP14136 432 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 FKBP5Q13451 457 aaPredicted RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 FYB2Q5VWT5 728 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 TMEM87AQ8NBN3 555 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.92□□□□□ -1.466e-7■■■□□ 18
NF1-216ENST00000495910 TRMT1Q9NXH9 659 aaKnown RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 ANKFY1Q9P2R3 1169 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 CIZ1Q9ULV3 898 aaPredicted RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 LIMCH1Q9UPQ0 1083 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 TXNDC9O14530 226 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 CRCPO75575 148 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 CCDC12Q8WUD4 166 aaPredicted RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 THEGQ9P2T0 379 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 BRD2P25440 801 aaKnown RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 TUBB4BP68371 445 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 IRX4P78413 519 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 ATP2B2Q01814 1243 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 NGDNQ8NEJ9 315 aaKnown RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 SYTL4Q96C24 671 aaPredicted RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 SPATS2LQ9NUQ6 558 aaKnown RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 BCAP29Q9UHQ4 241 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 CETN3O15182 167 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 STK3Q13188 491 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 SDCCAG8Q86SQ7 713 aaPredicted RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 PRKRIP1Q9H875 184 aaPredicted RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 MYBBP1AQ9BQG0 1328 aaKnown RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 SERPINI2O75830 405 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 RNF10Q8N5U6 811 aaKnown RBP5.92□□□□□ -1.46
NF1-216ENST00000495910 ZNF622Q969S3 477 aaKnown RBP eCLIP5.92□□□□□ -1.46
NF1-216ENST00000495910 FAN1Q9Y2M0 1017 aa5.92□□□□□ -1.46
NF1-216ENST00000495910 ATP5DP30049 168 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 PSMD6Q15008 389 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 VPS18Q9P253 973 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 KIF15Q9NS87 1388 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 GOLGA3Q08378 1498 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 VIMP08670 466 aaKnown RBP5.91□□□□□ -1.46
NF1-216ENST00000495910 CHMP7Q8WUX9 453 aaPredicted RBP5.91□□□□□ -1.46
NF1-216ENST00000495910 RPGRIP1Q96KN7 1286 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 TXNDC16Q9P2K2 825 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 FHAD1B1AJZ9 1412 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 ZC3H6P61129 1189 aaKnown RBP5.91□□□□□ -1.46
NF1-216ENST00000495910 CCDC92Q53HC0 331 aaPredicted RBP5.91□□□□□ -1.46
NF1-216ENST00000495910 CCDC183Q5T5S1 534 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 AFAP1L2Q8N4X5 818 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 MCUR1Q96AQ8 359 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 PHAXQ9H814 394 aaKnown RBP5.91□□□□□ -1.46
NF1-216ENST00000495910 FAM76AQ8TAV0 307 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 KCNK9Q9NPC2 374 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 GNL3LQ9NVN8 582 aaKnown RBP5.91□□□□□ -1.46
NF1-216ENST00000495910 DAAM1Q9Y4D1 1078 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 SYCE3A1L190 88 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 INPP5BP32019 993 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 ARMC9Q7Z3E5 817 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 Q9H521 79 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 FAM169AQ9Y6X4 670 aa5.91□□□□□ -1.46
NF1-216ENST00000495910 ZEB2O60315 1214 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 UBTFL1P0CB47 393 aaPredicted RBP5.9□□□□□ -1.46
NF1-216ENST00000495910 TTC39AQ5SRH9 613 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 CPLX3Q8WVH0 158 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 NKIRAS1Q9NYS0 192 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 TPX2Q9ULW0 747 aaKnown RBP5.9□□□□□ -1.46
NF1-216ENST00000495910 E9PMD0 336 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 GNG11P61952 73 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 HSP90AA5PQ58FG0 334 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 MAP3K21Q5TCX8 1036 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 CCDC94Q9BW85 323 aaPredicted RBP5.9□□□□□ -1.46
NF1-216ENST00000495910 DCAF8L1A6NGE4 600 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 ARHGEF2Q92974 986 aaKnown RBP5.9□□□□□ -1.46
NF1-216ENST00000495910 JAKMIP2Q96AA8 810 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 PPFIA3O75145 1194 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 TUBB4AP04350 444 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 LONP1P36776 959 aaKnown RBP5.9□□□□□ -1.46
NF1-216ENST00000495910 ATP6V1AP38606 617 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 MTIF2P46199 727 aaKnown RBP5.9□□□□□ -1.46
NF1-216ENST00000495910 CCDC62Q6P9F0 684 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 KRBA2Q6ZNG9 492 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 ZNF354CQ86Y25 554 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 CCDC125Q86Z20 511 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 CCDC65Q8IXS2 484 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 CTCFLQ8NI51 663 aaPredicted RBP5.9□□□□□ -1.46
NF1-216ENST00000495910 UBA5Q9GZZ9 404 aa5.9□□□□□ -1.46
NF1-216ENST00000495910 HSPA1LP34931 641 aa5.9□□□□□ -1.47
NF1-216ENST00000495910 CUL4BQ13620 913 aa5.9□□□□□ -1.47
NF1-216ENST00000495910 ZBTB41Q5SVQ8 909 aa5.9□□□□□ -1.47
NF1-216ENST00000495910 RIC3Q7Z5B4 369 aa5.9□□□□□ -1.47
NF1-216ENST00000495910 RAB11FIP4Q86YS3 637 aa5.9□□□□□ -1.47
NF1-216ENST00000495910 SMAP1Q8IYB5 467 aaPredicted RBP5.9□□□□□ -1.47
NF1-216ENST00000495910 GOLGA1Q92805 767 aa5.9□□□□□ -1.47
NF1-216ENST00000495910 PAWRQ96IZ0 340 aaKnown RBP5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms