RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-215ENST00000495893 CTCFLQ8NI51 663 aaPredicted RBP4.41□□□□□ -1.7
PHC3-215ENST00000495893 CDK5RAP3Q96JB5 506 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 DRC1Q96MC2 740 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 EFCC1Q9HA90 598 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 ZRANB1Q9UGI0 708 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 LIMCH1Q9UPQ0 1083 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 CAPN2P17655 700 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 BAG6P46379 1132 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 HOOK3Q86VS8 718 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 CCDC155Q8N6L0 562 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 PLEKHH1Q9ULM0 1364 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 RLBP1P12271 317 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 PCK1P35558 622 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 NUP62CLQ9H1M0 184 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 K7ELQ4 463 aaPredicted RBP4.41□□□□□ -1.7
PHC3-215ENST00000495893 ERC2O15083 957 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 CTAGE5O15320 804 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 BUB1BO60566 1050 aaPredicted RBP4.41□□□□□ -1.7
PHC3-215ENST00000495893 GMNNO75496 209 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 ABCC1P33527 1531 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 HIP1O00291 1037 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 CCDC113Q9H0I3 377 aa4.41□□□□□ -1.7
PHC3-215ENST00000495893 FSD2A1L4K1 749 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 FERP16591 822 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 FAM177A1Q8N128 213 aaPredicted RBP4.4□□□□□ -1.7
PHC3-215ENST00000495893 ARFGAP2Q8N6H7 521 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 CCDC150Q8NCX0 1101 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 UPF3BQ9BZI7 483 aaKnown RBP4.4□□□□□ -1.7
PHC3-215ENST00000495893 SCAF11Q99590 1463 aaKnown RBP4.4□□□□□ -1.7
PHC3-215ENST00000495893 URI1O94763 535 aaPredicted RBP4.4□□□□□ -1.7
PHC3-215ENST00000495893 SNW1Q13573 536 aaKnown RBP4.4□□□□□ -1.7
PHC3-215ENST00000495893 SPA17Q15506 151 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 USP6NLQ92738 828 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 PZPP20742 1482 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 KIF4BQ2VIQ3 1234 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 CCDC97Q96F63 343 aaPredicted RBP4.4□□□□□ -1.7
PHC3-215ENST00000495893 NCOA3Q9Y6Q9 1424 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 CHMP2AO43633 222 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 KIF4AO95239 1232 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 EIF5P55010 431 aaKnown RBP4.4□□□□□ -1.7
PHC3-215ENST00000495893 TRIM4Q9C037 500 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 THEGQ9P2T0 379 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 KIF1CO43896 1103 aaKnown RBP4.4□□□□□ -1.7
PHC3-215ENST00000495893 XPCQ01831 940 aaPredicted RBP4.4□□□□□ -1.7
PHC3-215ENST00000495893 HSP90AB4PQ58FF6 505 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 TRIM7Q9C029 511 aa4.4□□□□□ -1.7
PHC3-215ENST00000495893 EIF2AK4Q9P2K8 1649 aaKnown RBP4.4□□□□□ -1.71
PHC3-215ENST00000495893 CCDC172P0C7W6 258 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 U2AF1L5P0DN76 240 aaPredicted RBP4.4□□□□□ -1.71
PHC3-215ENST00000495893 U2AF1Q01081 240 aaKnown RBP eCLIP4.4□□□□□ -1.71
PHC3-215ENST00000495893 CWC25Q9NXE8 425 aaPredicted RBP4.4□□□□□ -1.71
PHC3-215ENST00000495893 GPATCH8Q9UKJ3 1502 aaKnown RBP4.4□□□□□ -1.71
PHC3-215ENST00000495893 BRD4O60885 1362 aaPredicted RBP4.4□□□□□ -1.71
PHC3-215ENST00000495893 MACROD2A1Z1Q3 448 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 PPFIA3O75145 1194 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 MAP3K9P80192 1104 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 MCM6Q14566 821 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 KCNH5Q8NCM2 988 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 SOX12O15370 315 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 MAP4K4O95819 1239 aaPredicted RBP4.4□□□□□ -1.71
PHC3-215ENST00000495893 ZKSCAN8Q15776 578 aaPredicted RBP4.4□□□□□ -1.71
PHC3-215ENST00000495893 NFXL1Q6ZNB6 911 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.4□□□□□ -1.71
PHC3-215ENST00000495893 DIAPH1O60610 1272 aaKnown RBP4.4□□□□□ -1.71
PHC3-215ENST00000495893 USO1O60763 962 aaKnown RBP4.4□□□□□ -1.71
PHC3-215ENST00000495893 DNAJC8O75937 253 aaPredicted RBP4.4□□□□□ -1.71
PHC3-215ENST00000495893 STMN2Q93045 179 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 ALS2CR12Q96Q35 445 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 ZNF692Q9BU19 519 aaPredicted RBP4.4□□□□□ -1.71
PHC3-215ENST00000495893 RIMS2Q9UQ26 1411 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 EFCAB6Q5THR3 1501 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 CIB2O75838 187 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 KCNA6P17658 529 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 UBE4AQ14139 1066 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 CNKSR2Q8WXI2 1034 aa4.4□□□□□ -1.71
PHC3-215ENST00000495893 CCDC196A0A1B0GTZ2 297 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 SLC8A1P32418 973 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 SPECC1Q5M775 1068 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 KRBA2Q6ZNG9 492 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 UIMC1Q96RL1 719 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 TSPOAP1O95153 1857 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 MAST1Q9Y2H9 1570 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 LRRC23Q53EV4 343 aaPredicted RBP4.39□□□□□ -1.71
PHC3-215ENST00000495893 WHAMMQ8TF30 809 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 GBP5Q96PP8 586 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 BACH2Q9BYV9 841 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 LARSQ9P2J5 1176 aaKnown RBP4.39□□□□□ -1.71
PHC3-215ENST00000495893 STK38Q15208 465 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 CCDC129Q6ZRS4 1044 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 BRPF1P55201 1214 aaPredicted RBP4.39□□□□□ -1.71
PHC3-215ENST00000495893 RBM26Q5T8P6 1007 aaKnown RBP4.39□□□□□ -1.71
PHC3-215ENST00000495893 RAB3IL1Q8TBN0 382 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 VGLL3A8MV65 326 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 G3V3G9 751 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 PFDN1O60925 122 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 POLD1P28340 1107 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 INPP5BP32019 993 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 DCAF8Q5TAQ9 597 aa4.39□□□□□ -1.71
PHC3-215ENST00000495893 SPATS2Q86XZ4 545 aaKnown RBP4.39□□□□□ -1.71
PHC3-215ENST00000495893 EIF2AQ9BY44 585 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms