RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 PRPF40BQ6NWY9 871 aaKnown RBP11.77□□□□□ -0.53
SORT1-208ENST00000495777 C7orf43Q8WVR3 580 aa11.77□□□□□ -0.53
SORT1-208ENST00000495777 MASTLQ96GX5 879 aa11.77□□□□□ -0.53
SORT1-208ENST00000495777 TAOK3Q9H2K8 898 aa11.77□□□□□ -0.53
SORT1-208ENST00000495777 SNRPA1P09661 255 aaKnown RBP11.76□□□□□ -0.53
SORT1-208ENST00000495777 NPM2Q86SE8 214 aaKnown RBP11.76□□□□□ -0.53
SORT1-208ENST00000495777 CFAP53Q96M91 514 aa11.76□□□□□ -0.53
SORT1-208ENST00000495777 ZNF219Q9P2Y4 722 aaPredicted RBP11.76□□□□□ -0.53
SORT1-208ENST00000495777 BCORQ6W2J9 1755 aa11.75□□□□□ -0.53
SORT1-208ENST00000495777 FER1L6Q2WGJ9 1857 aa11.75□□□□□ -0.53
SORT1-208ENST00000495777 PRAMEF22A3QJZ6 481 aa11.75□□□□□ -0.53
SORT1-208ENST00000495777 ZNF316A6NFI3 1004 aaPredicted RBP11.75□□□□□ -0.53
SORT1-208ENST00000495777 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
SORT1-208ENST00000495777 HTATSF1O43719 755 aaKnown RBP11.74□□□□□ -0.53
SORT1-208ENST00000495777 PIP4K2AP48426 406 aaPredicted RBP11.74□□□□□ -0.53
SORT1-208ENST00000495777 CNGB1Q14028 1251 aaPredicted RBP11.74□□□□□ -0.53
SORT1-208ENST00000495777 NBPF10Q6P3W6 841 aaKnown RBP11.74□□□□□ -0.53
SORT1-208ENST00000495777 MCM10Q7L590 875 aa11.74□□□□□ -0.53
SORT1-208ENST00000495777 NBPF15Q8N660 670 aa11.74□□□□□ -0.53
SORT1-208ENST00000495777 L3MBTL3Q96JM7 780 aaPredicted RBP11.74□□□□□ -0.53
SORT1-208ENST00000495777 NUDCQ9Y266 331 aa11.74□□□□□ -0.53
SORT1-208ENST00000495777 ZNF652Q9Y2D9 606 aa11.74□□□□□ -0.53
SORT1-208ENST00000495777 DDNO94850 711 aaPredicted RBP11.73□□□□□ -0.53
SORT1-208ENST00000495777 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
SORT1-208ENST00000495777 POTEJP0CG39 1038 aa11.73□□□□□ -0.53
SORT1-208ENST00000495777 HSPA1AP0DMV8 641 aaKnown RBP11.73□□□□□ -0.53
SORT1-208ENST00000495777 HSPA1BP0DMV9 641 aaKnown RBP11.73□□□□□ -0.53
SORT1-208ENST00000495777 NPR1P16066 1061 aa11.73□□□□□ -0.53
SORT1-208ENST00000495777 PPP2R1AP30153 589 aa11.73□□□□□ -0.53
SORT1-208ENST00000495777 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
SORT1-208ENST00000495777 NBPF5PQ86XG9 351 aaPredicted RBP11.73□□□□□ -0.53
SORT1-208ENST00000495777 RTF1Q92541 710 aaKnown RBP11.73□□□□□ -0.53
SORT1-208ENST00000495777 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
SORT1-208ENST00000495777 NPHP1O15259 732 aa11.72□□□□□ -0.53
SORT1-208ENST00000495777 U2AF1L5P0DN76 240 aaPredicted RBP11.72□□□□□ -0.53
SORT1-208ENST00000495777 U2AF1Q01081 240 aaKnown RBP eCLIP11.72□□□□□ -0.53
SORT1-208ENST00000495777 CCDC93Q567U6 631 aa11.72□□□□□ -0.53
SORT1-208ENST00000495777 SLX4Q8IY92 1834 aa11.72□□□□□ -0.53
SORT1-208ENST00000495777 ARFGEF2Q9Y6D5 1785 aa11.72□□□□□ -0.53
SORT1-208ENST00000495777 SNED1Q8TER0 1413 aa11.71□□□□□ -0.53
SORT1-208ENST00000495777 PASKQ96RG2 1323 aa11.71□□□□□ -0.53
SORT1-208ENST00000495777 DICER1Q9UPY3 1922 aaKnown RBP11.71□□□□□ -0.53
SORT1-208ENST00000495777 IQCA1LA6NCM1 817 aa11.71□□□□□ -0.53
SORT1-208ENST00000495777 FKBP4Q02790 459 aaKnown RBP eCLIP11.71□□□□□ -0.53
SORT1-208ENST00000495777 DCTN1Q14203 1278 aa11.71□□□□□ -0.53
SORT1-208ENST00000495777 TPTE2Q6XPS3 522 aa11.71□□□□□ -0.53
SORT1-208ENST00000495777 TNS4Q8IZW8 715 aa11.71□□□□□ -0.53
SORT1-208ENST00000495777 NIP7Q9Y221 180 aaKnown RBP eCLIP11.71□□□□□ -0.53
SORT1-208ENST00000495777 TAF7Q15545 349 aaPredicted RBP11.7□□□□□ -0.54
SORT1-208ENST00000495777 LDHDQ86WU2 507 aa11.7□□□□□ -0.54
SORT1-208ENST00000495777 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
SORT1-208ENST00000495777 HLFQ16534 295 aa11.69□□□□□ -0.54
SORT1-208ENST00000495777 CRY2Q49AN0 593 aa11.69□□□□□ -0.54
SORT1-208ENST00000495777 RTKN2Q8IZC4 609 aa11.69□□□□□ -0.54
SORT1-208ENST00000495777 CCDC88AQ3V6T2 1871 aa11.69□□□□□ -0.54
SORT1-208ENST00000495777 CNTNAP1P78357 1384 aa11.68□□□□□ -0.54
SORT1-208ENST00000495777 ZNF541Q9H0D2 1346 aa11.68□□□□□ -0.54
SORT1-208ENST00000495777 ERVV-1B6SEH8 477 aa11.68□□□□□ -0.54
SORT1-208ENST00000495777 FZD9O00144 591 aa11.68□□□□□ -0.54
SORT1-208ENST00000495777 ALDH1B1P30837 517 aa11.68□□□□□ -0.54
SORT1-208ENST00000495777 OLFM4Q6UX06 510 aa11.68□□□□□ -0.54
SORT1-208ENST00000495777 ZNF277Q9NRM2 450 aaPredicted RBP11.68□□□□□ -0.54
SORT1-208ENST00000495777 RIC1Q4ADV7 1423 aa11.68□□□□□ -0.54
SORT1-208ENST00000495777 ABCC12Q96J65 1359 aa11.67□□□□□ -0.54
SORT1-208ENST00000495777 IBTKQ9P2D0 1353 aaPredicted RBP11.67□□□□□ -0.54
SORT1-208ENST00000495777 ITGBL1O95965 494 aaPredicted RBP11.67□□□□□ -0.54
SORT1-208ENST00000495777 IARSP41252 1262 aaKnown RBP11.67□□□□□ -0.54
SORT1-208ENST00000495777 PNISRQ8TF01 805 aaKnown RBP11.67□□□□□ -0.54
SORT1-208ENST00000495777 PSMD1Q99460 953 aa11.67□□□□□ -0.54
SORT1-208ENST00000495777 MKRN1Q9UHC7 482 aaKnown RBP11.67□□□□□ -0.54
SORT1-208ENST00000495777 MAP3K15Q6ZN16 1313 aa11.66□□□□□ -0.54
SORT1-208ENST00000495777 HOXA10P31260 410 aaPredicted RBP11.66□□□□□ -0.54
SORT1-208ENST00000495777 EIF4A1P60842 406 aaKnown RBP11.66□□□□□ -0.54
SORT1-208ENST00000495777 SYNE4Q8N205 404 aa11.66□□□□□ -0.54
SORT1-208ENST00000495777 PLEKHF1Q96S99 279 aa11.66□□□□□ -0.54
SORT1-208ENST00000495777 NYXQ9GZU5 481 aa11.66□□□□□ -0.54
SORT1-208ENST00000495777 MIS18AQ9NYP9 233 aa11.66□□□□□ -0.54
SORT1-208ENST00000495777 HACL1Q9UJ83 578 aa11.66□□□□□ -0.54
SORT1-208ENST00000495777 ADAMTSL1Q8N6G6 1762 aa11.66□□□□□ -0.54
SORT1-208ENST00000495777 SCN4AP35499 1836 aa11.65□□□□□ -0.54
SORT1-208ENST00000495777 FAM177BA6PVY3 158 aa11.65□□□□□ -0.54
SORT1-208ENST00000495777 EPHX2P34913 555 aa11.65□□□□□ -0.54
SORT1-208ENST00000495777 CC2D2BQ6DHV5 1058 aa11.65□□□□□ -0.54
SORT1-208ENST00000495777 GPC2Q8N158 579 aa11.65□□□□□ -0.54
SORT1-208ENST00000495777 LAMB4A4D0S4 1761 aa11.64□□□□□ -0.55
SORT1-208ENST00000495777 UBN2Q6ZU65 1347 aa11.64□□□□□ -0.55
SORT1-208ENST00000495777 TMEM88BA6NKF7 163 aa11.64□□□□□ -0.55
SORT1-208ENST00000495777 CAPN15O75808 1086 aa11.64□□□□□ -0.55
SORT1-208ENST00000495777 GTF2E1P29083 439 aaPredicted RBP11.64□□□□□ -0.55
SORT1-208ENST00000495777 TTLL7Q6ZT98 887 aa11.64□□□□□ -0.55
SORT1-208ENST00000495777 PNMA8AQ86V59 439 aaPredicted RBP11.64□□□□□ -0.55
SORT1-208ENST00000495777 NUTM1Q86Y26 1132 aa11.64□□□□□ -0.55
SORT1-208ENST00000495777 ERBB4Q15303 1308 aa11.63□□□□□ -0.55
SORT1-208ENST00000495777 RNF123Q5XPI4 1314 aa11.63□□□□□ -0.55
SORT1-208ENST00000495777 COL4A5P29400 1685 aa11.63□□□□□ -0.55
SORT1-208ENST00000495777 FOXN1O15353 648 aa11.63□□□□□ -0.55
SORT1-208ENST00000495777 VEGFBP49765 207 aa11.63□□□□□ -0.55
SORT1-208ENST00000495777 NFE2L2Q16236 605 aa11.63□□□□□ -0.55
SORT1-208ENST00000495777 GRIPAP1Q4V328 841 aa11.63□□□□□ -0.55
SORT1-208ENST00000495777 EAPPQ56P03 285 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms