RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 GLRX3O76003 335 aaKnown RBP15.67■□□□□ 0.1
PTPN7-217ENST00000495688 ESCO1Q5FWF5 840 aa15.67■□□□□ 0.1
PTPN7-217ENST00000495688 PRPF40BQ6NWY9 871 aaKnown RBP15.67■□□□□ 0.1
PTPN7-217ENST00000495688 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.67■□□□□ 0.1
PTPN7-217ENST00000495688 CCDC83Q8IWF9 413 aa15.67■□□□□ 0.1
PTPN7-217ENST00000495688 CLASRPQ8N2M8 674 aaKnown RBP15.67■□□□□ 0.1
PTPN7-217ENST00000495688 SYAP1Q96A49 352 aaPredicted RBP15.67■□□□□ 0.1
PTPN7-217ENST00000495688 HYPKQ9NX55 129 aa15.67■□□□□ 0.1
PTPN7-217ENST00000495688 KDM3BQ7LBC6 1761 aa15.66■□□□□ 0.1
PTPN7-217ENST00000495688 FIBPO43427 364 aa15.66■□□□□ 0.1
PTPN7-217ENST00000495688 HOXB7P09629 217 aa15.66■□□□□ 0.1
PTPN7-217ENST00000495688 PSME1Q06323 249 aa15.66■□□□□ 0.1
PTPN7-217ENST00000495688 AKAP4Q5JQC9 854 aa15.66■□□□□ 0.1
PTPN7-217ENST00000495688 JAKMIP1Q96N16 626 aaKnown RBP15.66■□□□□ 0.1
PTPN7-217ENST00000495688 DBF4Q9UBU7 674 aaPredicted RBP15.66■□□□□ 0.1
PTPN7-217ENST00000495688 SMC3Q9UQE7 1217 aa15.66■□□□□ 0.1
PTPN7-217ENST00000495688 PXDNQ92626 1479 aa15.66■□□□□ 0.1
PTPN7-217ENST00000495688 HSP90AB4PQ58FF6 505 aa15.66■□□□□ 0.1
PTPN7-217ENST00000495688 NFAT5O94916 1531 aa15.65■□□□□ 0.1
PTPN7-217ENST00000495688 ECHDC1Q9NTX5 307 aa15.65■□□□□ 0.1
PTPN7-217ENST00000495688 TTC41PQ6P2S7 1318 aa15.65■□□□□ 0.1
PTPN7-217ENST00000495688 USP42Q9H9J4 1324 aaKnown RBP15.65■□□□□ 0.1
PTPN7-217ENST00000495688 USP54Q70EL1 1684 aa15.65■□□□□ 0.1
PTPN7-217ENST00000495688 GIGYF1O75420 1035 aaPredicted RBP15.65■□□□□ 0.1
PTPN7-217ENST00000495688 CCDC39Q9UFE4 941 aa15.65■□□□□ 0.1
PTPN7-217ENST00000495688 F13A1P00488 732 aa15.64■□□□□ 0.09
PTPN7-217ENST00000495688 IFIT2P09913 472 aaKnown RBP15.64■□□□□ 0.09
PTPN7-217ENST00000495688 AIMP1Q12904 312 aaKnown RBP15.64■□□□□ 0.09
PTPN7-217ENST00000495688 MTX1Q13505 466 aa15.64■□□□□ 0.09
PTPN7-217ENST00000495688 AACSQ86V21 672 aa15.64■□□□□ 0.09
PTPN7-217ENST00000495688 FAM227BQ96M60 508 aa15.64■□□□□ 0.09
PTPN7-217ENST00000495688 RNMTO43148 476 aaKnown RBP15.64■□□□□ 0.09
PTPN7-217ENST00000495688 PTMAP06454 111 aaKnown RBP15.64■□□□□ 0.09
PTPN7-217ENST00000495688 GJB2P29033 226 aa15.64■□□□□ 0.09
PTPN7-217ENST00000495688 ST3GAL1Q11201 340 aa15.64■□□□□ 0.09
PTPN7-217ENST00000495688 NECAB1Q8N987 351 aa15.64■□□□□ 0.09
PTPN7-217ENST00000495688 KAZALD1Q96I82 304 aa15.64■□□□□ 0.09
PTPN7-217ENST00000495688 USP25Q9UHP3 1055 aa15.64■□□□□ 0.09
PTPN7-217ENST00000495688 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.64■□□□□ 0.09
PTPN7-217ENST00000495688 HCLS1P14317 486 aaPredicted RBP15.63■□□□□ 0.09
PTPN7-217ENST00000495688 RBM10P98175 930 aaKnown RBP15.63■□□□□ 0.09
PTPN7-217ENST00000495688 PLEKHO1Q53GL0 409 aaPredicted RBP15.63■□□□□ 0.09
PTPN7-217ENST00000495688 TMEM87AQ8NBN3 555 aa15.63■□□□□ 0.09
PTPN7-217ENST00000495688 ZNF830Q96NB3 372 aaPredicted RBP15.63■□□□□ 0.09
PTPN7-217ENST00000495688 CCDC8Q9H0W5 538 aaPredicted RBP15.63■□□□□ 0.09
PTPN7-217ENST00000495688 PDRG1Q9NUG6 133 aa15.63■□□□□ 0.09
PTPN7-217ENST00000495688 TLR7Q9NYK1 1049 aaKnown RBP15.63■□□□□ 0.09
PTPN7-217ENST00000495688 CRYBG1Q9Y4K1 1723 aa15.63■□□□□ 0.09
PTPN7-217ENST00000495688 PHF14O94880 888 aa15.63■□□□□ 0.09
PTPN7-217ENST00000495688 DNM1Q05193 864 aaKnown RBP15.63■□□□□ 0.09
PTPN7-217ENST00000495688 LMOD2Q6P5Q4 547 aa15.63■□□□□ 0.09
PTPN7-217ENST00000495688 KSR2Q6VAB6 950 aa15.63■□□□□ 0.09
PTPN7-217ENST00000495688 SUCLG2Q96I99 432 aa15.63■□□□□ 0.09
PTPN7-217ENST00000495688 SIL1Q9H173 461 aa15.63■□□□□ 0.09
PTPN7-217ENST00000495688 SASH1O94885 1247 aa15.62■□□□□ 0.09
PTPN7-217ENST00000495688 C1orf141Q5JVX7 400 aa15.62■□□□□ 0.09
PTPN7-217ENST00000495688 KLHDC4Q8TBB5 520 aa15.62■□□□□ 0.09
PTPN7-217ENST00000495688 EAF2Q96CJ1 260 aaPredicted RBP15.62■□□□□ 0.09
PTPN7-217ENST00000495688 ME3Q16798 604 aa15.62■□□□□ 0.09
PTPN7-217ENST00000495688 CCDC183Q5T5S1 534 aa15.62■□□□□ 0.09
PTPN7-217ENST00000495688 TCEANC2Q96MN5 208 aa15.62■□□□□ 0.09
PTPN7-217ENST00000495688 BICC1Q9H694 974 aaKnown RBP15.62■□□□□ 0.09
PTPN7-217ENST00000495688 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.62■□□□□ 0.09
PTPN7-217ENST00000495688 FER1L4A9Z1Z3 1794 aa15.62■□□□□ 0.09
PTPN7-217ENST00000495688 RUFY2Q8WXA3 655 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 MTMR6Q9Y217 621 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 TAF6LQ9Y6J9 622 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 GCP02774 474 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 UBE2HP62256 183 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 NECTIN1Q15223 517 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 GIMAP6Q6P9H5 292 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 ZSWIM6Q9HCJ5 1215 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 RBM8AQ9Y5S9 174 aaKnown RBP15.61■□□□□ 0.09
PTPN7-217ENST00000495688 CYP46A1Q9Y6A2 500 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 CCDC171Q6TFL3 1326 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 VPS37CA5D8V6 355 aaPredicted RBP15.61■□□□□ 0.09
PTPN7-217ENST00000495688 VPS53Q5VIR6 699 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 ORAI2Q96SN7 254 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 AXIN2Q9Y2T1 843 aa15.61■□□□□ 0.09
PTPN7-217ENST00000495688 GRM8O00222 908 aa15.6■□□□□ 0.09
PTPN7-217ENST00000495688 ALDH1L1O75891 902 aa15.6■□□□□ 0.09
PTPN7-217ENST00000495688 KCNJ4P48050 445 aa15.6■□□□□ 0.09
PTPN7-217ENST00000495688 NMIQ13287 307 aaPredicted RBP15.6■□□□□ 0.09
PTPN7-217ENST00000495688 KCNH5Q8NCM2 988 aa15.6■□□□□ 0.09
PTPN7-217ENST00000495688 LMO7Q8WWI1 1683 aa15.6■□□□□ 0.09
PTPN7-217ENST00000495688 EVI5LQ96CN4 794 aa15.6■□□□□ 0.09
PTPN7-217ENST00000495688 BOLA2Q9H3K6 86 aa15.6■□□□□ 0.09
PTPN7-217ENST00000495688 TPCN1Q9ULQ1 816 aa15.6■□□□□ 0.09
PTPN7-217ENST00000495688 MCM5P33992 734 aa15.59■□□□□ 0.09
PTPN7-217ENST00000495688 CREB3L3Q68CJ9 461 aa15.59■□□□□ 0.09
PTPN7-217ENST00000495688 FAM173BQ6P4H8 233 aa15.59■□□□□ 0.09
PTPN7-217ENST00000495688 GPATCH3Q96I76 525 aa15.59■□□□□ 0.09
PTPN7-217ENST00000495688 UQCRHLA0A096LP55 91 aa15.59■□□□□ 0.09
PTPN7-217ENST00000495688 A0A0D9SFI3 127 aa15.59■□□□□ 0.09
PTPN7-217ENST00000495688 UQCRHP07919 91 aa15.59■□□□□ 0.09
PTPN7-217ENST00000495688 SLC39A6Q13433 755 aa15.59■□□□□ 0.09
PTPN7-217ENST00000495688 FERMT3Q86UX7 667 aa15.59■□□□□ 0.09
PTPN7-217ENST00000495688 ANKRD24Q8TF21 1146 aa15.59■□□□□ 0.09
PTPN7-217ENST00000495688 EDC3Q96F86 508 aaKnown RBP15.59■□□□□ 0.09
PTPN7-217ENST00000495688 ADCY5O95622 1261 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms