RNA–Protein interactions for RNA: ENST00000494306.1

COX5B-204, Transcript of cytochrome c oxidase subunit 5B, humanhuman

TSL 2

Gene COX5B, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX5B-204ENST00000494306 LTBP3Q9NS15 1303 aa16.45■□□□□ 0.22
COX5B-204ENST00000494306 BTBD11A6QL63 1104 aa16.44■□□□□ 0.22
COX5B-204ENST00000494306 ERFEQ4G0M1 354 aa16.44■□□□□ 0.22
COX5B-204ENST00000494306 COL11A2P13942 1736 aaPredicted RBP16.43■□□□□ 0.22
COX5B-204ENST00000494306 SRGNP10124 158 aa16.43■□□□□ 0.22
COX5B-204ENST00000494306 STYK1Q6J9G0 422 aa16.43■□□□□ 0.22
COX5B-204ENST00000494306 CNBD1Q8NA66 436 aa16.43■□□□□ 0.22
COX5B-204ENST00000494306 CNKSR1Q969H4 720 aa16.43■□□□□ 0.22
COX5B-204ENST00000494306 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
COX5B-204ENST00000494306 FER1L6Q2WGJ9 1857 aa16.42■□□□□ 0.22
COX5B-204ENST00000494306 PRKAR2BP31323 418 aa16.42■□□□□ 0.22
COX5B-204ENST00000494306 DZIP3Q86Y13 1208 aaKnown RBP16.42■□□□□ 0.22
COX5B-204ENST00000494306 RSPH6AQ9H0K4 717 aa16.42■□□□□ 0.22
COX5B-204ENST00000494306 PRAMEF22A3QJZ6 481 aa16.41■□□□□ 0.22
COX5B-204ENST00000494306 PRPF40BQ6NWY9 871 aaKnown RBP16.41■□□□□ 0.22
COX5B-204ENST00000494306 NPM2Q86SE8 214 aaKnown RBP16.41■□□□□ 0.22
COX5B-204ENST00000494306 MASTLQ96GX5 879 aa16.41■□□□□ 0.22
COX5B-204ENST00000494306 TAOK3Q9H2K8 898 aa16.41■□□□□ 0.22
COX5B-204ENST00000494306 DDNO94850 711 aaPredicted RBP16.4■□□□□ 0.22
COX5B-204ENST00000494306 PIP4K2AP48426 406 aaPredicted RBP16.4■□□□□ 0.22
COX5B-204ENST00000494306 ST5P78524 1137 aa16.4■□□□□ 0.22
COX5B-204ENST00000494306 CLEC4GQ6UXB4 293 aa16.4■□□□□ 0.22
COX5B-204ENST00000494306 C7orf43Q8WVR3 580 aa16.4■□□□□ 0.22
COX5B-204ENST00000494306 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
COX5B-204ENST00000494306 DICER1Q9UPY3 1922 aaKnown RBP16.39■□□□□ 0.21
COX5B-204ENST00000494306 NPHP1O15259 732 aa16.39■□□□□ 0.21
COX5B-204ENST00000494306 HSPA1AP0DMV8 641 aaKnown RBP16.39■□□□□ 0.21
COX5B-204ENST00000494306 HSPA1BP0DMV9 641 aaKnown RBP16.39■□□□□ 0.21
COX5B-204ENST00000494306 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
COX5B-204ENST00000494306 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
COX5B-204ENST00000494306 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
COX5B-204ENST00000494306 POTEIP0CG38 1075 aa16.38■□□□□ 0.21
COX5B-204ENST00000494306 POTEJP0CG39 1038 aa16.38■□□□□ 0.21
COX5B-204ENST00000494306 MCM10Q7L590 875 aa16.38■□□□□ 0.21
COX5B-204ENST00000494306 TNS4Q8IZW8 715 aa16.38■□□□□ 0.21
COX5B-204ENST00000494306 CFAP53Q96M91 514 aa16.38■□□□□ 0.21
COX5B-204ENST00000494306 BCORQ6W2J9 1755 aa16.37■□□□□ 0.21
COX5B-204ENST00000494306 KLRG2A4D1S0 409 aaPredicted RBP16.37■□□□□ 0.21
COX5B-204ENST00000494306 NBPF5PQ86XG9 351 aaPredicted RBP16.37■□□□□ 0.21
COX5B-204ENST00000494306 NBPF26B4DH59 902 aa16.36■□□□□ 0.21
COX5B-204ENST00000494306 NBPF10Q6P3W6 841 aaKnown RBP16.36■□□□□ 0.21
COX5B-204ENST00000494306 NBPF15Q8N660 670 aa16.36■□□□□ 0.21
COX5B-204ENST00000494306 RTF1Q92541 710 aaKnown RBP16.36■□□□□ 0.21
COX5B-204ENST00000494306 CREBZFQ9NS37 354 aa16.36■□□□□ 0.21
COX5B-204ENST00000494306 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
COX5B-204ENST00000494306 RGL2O15211 777 aa16.35■□□□□ 0.21
COX5B-204ENST00000494306 CAPN15O75808 1086 aa16.35■□□□□ 0.21
COX5B-204ENST00000494306 NPR1P16066 1061 aa16.35■□□□□ 0.21
COX5B-204ENST00000494306 TPTE2Q6XPS3 522 aa16.35■□□□□ 0.21
COX5B-204ENST00000494306 L3MBTL3Q96JM7 780 aaPredicted RBP16.35■□□□□ 0.21
COX5B-204ENST00000494306 ZNF652Q9Y2D9 606 aa16.35■□□□□ 0.21
COX5B-204ENST00000494306 ARFGEF2Q9Y6D5 1785 aa16.34■□□□□ 0.21
COX5B-204ENST00000494306 U2AF1L5P0DN76 240 aaPredicted RBP16.34■□□□□ 0.21
COX5B-204ENST00000494306 U2AF1Q01081 240 aaKnown RBP eCLIP16.34■□□□□ 0.21
COX5B-204ENST00000494306 DCTN1Q14203 1278 aa16.34■□□□□ 0.21
COX5B-204ENST00000494306 CCDC93Q567U6 631 aa16.34■□□□□ 0.21
COX5B-204ENST00000494306 NIP7Q9Y221 180 aaKnown RBP eCLIP16.34■□□□□ 0.21
COX5B-204ENST00000494306 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.2
COX5B-204ENST00000494306 PPP2R1AP30153 589 aa16.33■□□□□ 0.2
COX5B-204ENST00000494306 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.2
COX5B-204ENST00000494306 TAF1DQ9H5J8 278 aaPredicted RBP16.33■□□□□ 0.2
COX5B-204ENST00000494306 MKRN1Q9UHC7 482 aaKnown RBP16.33■□□□□ 0.2
COX5B-204ENST00000494306 IQCA1LA6NCM1 817 aa16.32■□□□□ 0.2
COX5B-204ENST00000494306 CACNA1SQ13698 1873 aa16.32■□□□□ 0.2
COX5B-204ENST00000494306 HLFQ16534 295 aa16.32■□□□□ 0.2
COX5B-204ENST00000494306 OLFM4Q6UX06 510 aa16.32■□□□□ 0.2
COX5B-204ENST00000494306 LDHDQ86WU2 507 aa16.32■□□□□ 0.2
COX5B-204ENST00000494306 PASKQ96RG2 1323 aa16.32■□□□□ 0.2
COX5B-204ENST00000494306 TAF7Q15545 349 aaPredicted RBP16.31■□□□□ 0.2
COX5B-204ENST00000494306 ZNF277Q9NRM2 450 aaPredicted RBP16.31■□□□□ 0.2
COX5B-204ENST00000494306 ZNF541Q9H0D2 1346 aa16.3■□□□□ 0.2
COX5B-204ENST00000494306 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
COX5B-204ENST00000494306 RTKN2Q8IZC4 609 aa16.3■□□□□ 0.2
COX5B-204ENST00000494306 MIS18AQ9NYP9 233 aa16.3■□□□□ 0.2
COX5B-204ENST00000494306 CNTNAP1P78357 1384 aa16.29■□□□□ 0.2
COX5B-204ENST00000494306 ITGBL1O95965 494 aaPredicted RBP16.29■□□□□ 0.2
COX5B-204ENST00000494306 FZD9O00144 591 aa16.28■□□□□ 0.2
COX5B-204ENST00000494306 ALDH1B1P30837 517 aa16.28■□□□□ 0.2
COX5B-204ENST00000494306 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
COX5B-204ENST00000494306 SCN4AP35499 1836 aa16.28■□□□□ 0.2
COX5B-204ENST00000494306 GTF2E1P29083 439 aaPredicted RBP16.27■□□□□ 0.2
COX5B-204ENST00000494306 IARSP41252 1262 aaKnown RBP16.27■□□□□ 0.2
COX5B-204ENST00000494306 CRY2Q49AN0 593 aa16.27■□□□□ 0.2
COX5B-204ENST00000494306 HACL1Q9UJ83 578 aa16.27■□□□□ 0.2
COX5B-204ENST00000494306 SNED1Q8TER0 1413 aa16.27■□□□□ 0.19
COX5B-204ENST00000494306 TMEM88BA6NKF7 163 aa16.26■□□□□ 0.19
COX5B-204ENST00000494306 ERVV-1B6SEH8 477 aa16.26■□□□□ 0.19
COX5B-204ENST00000494306 FOXN1O15353 648 aa16.26■□□□□ 0.19
COX5B-204ENST00000494306 EPHX2P34913 555 aa16.26■□□□□ 0.19
COX5B-204ENST00000494306 EAPPQ56P03 285 aaPredicted RBP16.26■□□□□ 0.19
COX5B-204ENST00000494306 PSMD1Q99460 953 aa16.26■□□□□ 0.19
COX5B-204ENST00000494306 VEGFBP49765 207 aa16.25■□□□□ 0.19
COX5B-204ENST00000494306 NGEFQ8N5V2 710 aa16.25■□□□□ 0.19
COX5B-204ENST00000494306 NYXQ9GZU5 481 aa16.25■□□□□ 0.19
COX5B-204ENST00000494306 ABCC12Q96J65 1359 aa16.25■□□□□ 0.19
COX5B-204ENST00000494306 TTLL7Q6ZT98 887 aa16.24■□□□□ 0.19
COX5B-204ENST00000494306 PNMA8AQ86V59 439 aaPredicted RBP16.24■□□□□ 0.19
COX5B-204ENST00000494306 NUTM1Q86Y26 1132 aa16.24■□□□□ 0.19
COX5B-204ENST00000494306 GPC2Q8N158 579 aa16.24■□□□□ 0.19
COX5B-204ENST00000494306 PNISRQ8TF01 805 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms