RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 ZNF622Q969S3 477 aaKnown RBP eCLIP29.3■■■□□ 2.28
CDKN2A-206ENST00000494262 RUNDC1Q96C34 613 aa29.3■■■□□ 2.28
CDKN2A-206ENST00000494262 SENP3-EIF4A1A0A087X0R7 540 aa29.29■■■□□ 2.28
CDKN2A-206ENST00000494262 NBPF5PQ86XG9 351 aaPredicted RBP29.29■■■□□ 2.28
CDKN2A-206ENST00000494262 ADAMTS8Q9UP79 889 aa29.29■■■□□ 2.28
CDKN2A-206ENST00000494262 RGL2O15211 777 aa29.28■■■□□ 2.28
CDKN2A-206ENST00000494262 ZEB1P37275 1124 aaPredicted RBP29.28■■■□□ 2.28
CDKN2A-206ENST00000494262 RNF181Q9P0P0 153 aa29.28■■■□□ 2.28
CDKN2A-206ENST00000494262 NIP7Q9Y221 180 aaKnown RBP eCLIP29.28■■■□□ 2.28
CDKN2A-206ENST00000494262 COL11A2P13942 1736 aaPredicted RBP29.26■■■□□ 2.27
CDKN2A-206ENST00000494262 MYL6BP14649 208 aa29.26■■■□□ 2.27
CDKN2A-206ENST00000494262 RASSF7Q02833 373 aa29.26■■■□□ 2.27
CDKN2A-206ENST00000494262 HLFQ16534 295 aa29.26■■■□□ 2.27
CDKN2A-206ENST00000494262 BABAM1Q9NWV8 329 aa29.26■■■□□ 2.27
CDKN2A-206ENST00000494262 KIF6Q6ZMV9 814 aa29.24■■■□□ 2.27
CDKN2A-206ENST00000494262 FAM177BA6PVY3 158 aa29.23■■■□□ 2.27
CDKN2A-206ENST00000494262 KIF3CO14782 793 aa29.22■■■□□ 2.27
CDKN2A-206ENST00000494262 TPTE2Q6XPS3 522 aa29.22■■■□□ 2.27
CDKN2A-206ENST00000494262 TTLL7Q6ZT98 887 aa29.22■■■□□ 2.27
CDKN2A-206ENST00000494262 TRIM35Q9UPQ4 493 aa29.22■■■□□ 2.27
CDKN2A-206ENST00000494262 SBF1O95248 1867 aa29.22■■■□□ 2.27
CDKN2A-206ENST00000494262 ERBB4Q15303 1308 aa29.21■■■□□ 2.27
CDKN2A-206ENST00000494262 MAP3K15Q6ZN16 1313 aa29.21■■■□□ 2.27
CDKN2A-206ENST00000494262 ERVV-1B6SEH8 477 aa29.21■■■□□ 2.27
CDKN2A-206ENST00000494262 ZNF219Q9P2Y4 722 aaPredicted RBP29.21■■■□□ 2.27
CDKN2A-206ENST00000494262 SRGNP10124 158 aa29.2■■■□□ 2.26
CDKN2A-206ENST00000494262 EIF2S2P20042 333 aaKnown RBP29.2■■■□□ 2.26
CDKN2A-206ENST00000494262 STYK1Q6J9G0 422 aa29.2■■■□□ 2.26
CDKN2A-206ENST00000494262 LAS1LQ9Y4W2 734 aaKnown RBP29.2■■■□□ 2.26
CDKN2A-206ENST00000494262 CEP350Q5VT06 3117 aa29.19■■■□□ 2.26
CDKN2A-206ENST00000494262 C21orf2O43822 256 aa29.19■■■□□ 2.26
CDKN2A-206ENST00000494262 LMNB1P20700 586 aa29.19■■■□□ 2.26
CDKN2A-206ENST00000494262 CNKSR1Q969H4 720 aa29.19■■■□□ 2.26
CDKN2A-206ENST00000494262 MASTLQ96GX5 879 aa29.19■■■□□ 2.26
CDKN2A-206ENST00000494262 ZBTB3Q9H5J0 574 aa29.18■■■□□ 2.26
CDKN2A-206ENST00000494262 NMRK2Q9NPI5 230 aa29.18■■■□□ 2.26
CDKN2A-206ENST00000494262 NFKBIEO00221 500 aa29.17■■■□□ 2.26
CDKN2A-206ENST00000494262 NUP98P52948 1817 aa29.16■■■□□ 2.26
CDKN2A-206ENST00000494262 CHL1O00533 1208 aa29.16■■■□□ 2.26
CDKN2A-206ENST00000494262 GTF2E1P29083 439 aaPredicted RBP29.16■■■□□ 2.26
CDKN2A-206ENST00000494262 PRELPP51888 382 aa29.16■■■□□ 2.26
CDKN2A-206ENST00000494262 PRPF40BQ6NWY9 871 aaKnown RBP29.15■■■□□ 2.26
CDKN2A-206ENST00000494262 PDIA6Q15084 440 aa29.14■■■□□ 2.26
CDKN2A-206ENST00000494262 PROSER3Q2NL68 480 aa29.14■■■□□ 2.26
CDKN2A-206ENST00000494262 NECTIN2Q92692 538 aa29.14■■■□□ 2.26
CDKN2A-206ENST00000494262 NYXQ9GZU5 481 aa29.14■■■□□ 2.26
CDKN2A-206ENST00000494262 KDM2BQ8NHM5 1336 aa29.14■■■□□ 2.25
CDKN2A-206ENST00000494262 SLX4Q8IY92 1834 aa29.13■■■□□ 2.25
CDKN2A-206ENST00000494262 CACNA1SQ13698 1873 aa29.13■■■□□ 2.25
CDKN2A-206ENST00000494262 NPR1P16066 1061 aa29.13■■■□□ 2.25
CDKN2A-206ENST00000494262 GPTP24298 496 aa29.13■■■□□ 2.25
CDKN2A-206ENST00000494262 KLRG2A4D1S0 409 aaPredicted RBP29.12■■■□□ 2.25
CDKN2A-206ENST00000494262 ANXA1P04083 346 aa29.12■■■□□ 2.25
CDKN2A-206ENST00000494262 KRT24Q2M2I5 525 aa29.12■■■□□ 2.25
CDKN2A-206ENST00000494262 LRP10Q7Z4F1 713 aa29.12■■■□□ 2.25
CDKN2A-206ENST00000494262 ZC3H4Q9UPT8 1303 aaKnown RBP29.12■■■□□ 2.25
CDKN2A-206ENST00000494262 NUTM1Q86Y26 1132 aa29.11■■■□□ 2.25
CDKN2A-206ENST00000494262 ARFGEF2Q9Y6D5 1785 aa29.11■■■□□ 2.25
CDKN2A-206ENST00000494262 APAF1O14727 1248 aa29.1■■■□□ 2.25
CDKN2A-206ENST00000494262 GIGYF2Q6Y7W6 1299 aaKnown RBP29.1■■■□□ 2.25
CDKN2A-206ENST00000494262 UBN2Q6ZU65 1347 aa29.1■■■□□ 2.25
CDKN2A-206ENST00000494262 ABCC12Q96J65 1359 aa29.1■■■□□ 2.25
CDKN2A-206ENST00000494262 CCDC88AQ3V6T2 1871 aa29.09■■■□□ 2.25
CDKN2A-206ENST00000494262 SOGA3Q5TF21 947 aa29.09■■■□□ 2.25
CDKN2A-206ENST00000494262 FER1L6Q2WGJ9 1857 aa29.08■■■□□ 2.25
CDKN2A-206ENST00000494262 TOMM70O94826 608 aa29.08■■■□□ 2.25
CDKN2A-206ENST00000494262 ERFEQ4G0M1 354 aa29.08■■■□□ 2.25
CDKN2A-206ENST00000494262 ZNF34Q8IZ26 560 aa29.08■■■□□ 2.25
CDKN2A-206ENST00000494262 TAOK3Q9H2K8 898 aa29.08■■■□□ 2.25
CDKN2A-206ENST00000494262 SUSD4Q5VX71 490 aa29.07■■■□□ 2.24
CDKN2A-206ENST00000494262 TIAM2Q8IVF5 1701 aa29.07■■■□□ 2.24
CDKN2A-206ENST00000494262 CFAP44Q96MT7 982 aa29.07■■■□□ 2.24
CDKN2A-206ENST00000494262 RRAGCQ9HB90 399 aa29.07■■■□□ 2.24
CDKN2A-206ENST00000494262 TNRC6CQ9HCJ0 1690 aaKnown RBP29.07■■■□□ 2.24
CDKN2A-206ENST00000494262 IBTKQ9P2D0 1353 aaPredicted RBP29.07■■■□□ 2.24
CDKN2A-206ENST00000494262 HSPA6P17066 643 aa29.06■■■□□ 2.24
CDKN2A-206ENST00000494262 C16orf71Q8IYS4 520 aaPredicted RBP29.06■■■□□ 2.24
CDKN2A-206ENST00000494262 LTBP3Q9NS15 1303 aa29.05■■■□□ 2.24
CDKN2A-206ENST00000494262 AIMP1Q12904 312 aaKnown RBP29.05■■■□□ 2.24
CDKN2A-206ENST00000494262 COPS6Q7L5N1 327 aa29.05■■■□□ 2.24
CDKN2A-206ENST00000494262 XAGE3Q8WTP9 111 aa29.05■■■□□ 2.24
CDKN2A-206ENST00000494262 C7orf43Q8WVR3 580 aa29.05■■■□□ 2.24
CDKN2A-206ENST00000494262 DDX21Q9NR30 783 aaKnown RBP eCLIP29.05■■■□□ 2.24
CDKN2A-206ENST00000494262 ZNF316A6NFI3 1004 aaPredicted RBP29.04■■■□□ 2.24
CDKN2A-206ENST00000494262 CCDC184Q52MB2 194 aa29.04■■■□□ 2.24
CDKN2A-206ENST00000494262 HDGFL1Q5TGJ6 251 aa29.04■■■□□ 2.24
CDKN2A-206ENST00000494262 GLTPD2A6NH11 291 aa29.03■■■□□ 2.24
CDKN2A-206ENST00000494262 NTSR2O95665 410 aa29.03■■■□□ 2.24
CDKN2A-206ENST00000494262 PARP10Q53GL7 1025 aa29.03■■■□□ 2.24
CDKN2A-206ENST00000494262 CCDC93Q567U6 631 aa29.03■■■□□ 2.24
CDKN2A-206ENST00000494262 PPP1R42Q7Z4L9 355 aa29.03■■■□□ 2.24
CDKN2A-206ENST00000494262 MBIPQ9NS73 344 aa29.03■■■□□ 2.24
CDKN2A-206ENST00000494262 CHPF2Q9P2E5 772 aa29.03■■■□□ 2.24
CDKN2A-206ENST00000494262 HOXB7P09629 217 aa29.02■■■□□ 2.24
CDKN2A-206ENST00000494262 ALDH1B1P30837 517 aa29.02■■■□□ 2.24
CDKN2A-206ENST00000494262 CRY2Q49AN0 593 aa29.02■■■□□ 2.24
CDKN2A-206ENST00000494262 CALD1Q05682 793 aaKnown RBP29.01■■■□□ 2.23
CDKN2A-206ENST00000494262 RBM46Q8TBY0 533 aaKnown RBP29.01■■■□□ 2.23
CDKN2A-206ENST00000494262 RIC1Q4ADV7 1423 aa29.01■■■□□ 2.23
CDKN2A-206ENST00000494262 ZNF853P0CG23 659 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms