RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 BICDL1Q6ZP65 573 aa10.44□□□□□ -0.74
TM4SF1-204ENST00000493348 AMIGO3Q86WK7 504 aa10.44□□□□□ -0.74
TM4SF1-204ENST00000493348 SETDB2Q96T68 719 aa10.44□□□□□ -0.74
TM4SF1-204ENST00000493348 CHPF2Q9P2E5 772 aa10.44□□□□□ -0.74
TM4SF1-204ENST00000493348 NUP98P52948 1817 aa10.43□□□□□ -0.74
TM4SF1-204ENST00000493348 NBPF26B4DH59 902 aa10.43□□□□□ -0.74
TM4SF1-204ENST00000493348 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
TM4SF1-204ENST00000493348 NBPF10Q6P3W6 841 aaKnown RBP10.43□□□□□ -0.74
TM4SF1-204ENST00000493348 CLEC4GQ6UXB4 293 aa10.43□□□□□ -0.74
TM4SF1-204ENST00000493348 NBPF15Q8N660 670 aa10.43□□□□□ -0.74
TM4SF1-204ENST00000493348 C8orf58Q8NAV2 365 aa10.43□□□□□ -0.74
TM4SF1-204ENST00000493348 BCORQ6W2J9 1755 aa10.43□□□□□ -0.74
TM4SF1-204ENST00000493348 SCN7AQ01118 1682 aa10.43□□□□□ -0.74
TM4SF1-204ENST00000493348 MAP3K15Q6ZN16 1313 aa10.42□□□□□ -0.74
TM4SF1-204ENST00000493348 ANXA1P04083 346 aa10.42□□□□□ -0.74
TM4SF1-204ENST00000493348 PTGER2P43116 358 aa10.42□□□□□ -0.74
TM4SF1-204ENST00000493348 FKBP8Q14318 412 aa10.42□□□□□ -0.74
TM4SF1-204ENST00000493348 HSP90AB3PQ58FF7 597 aa10.42□□□□□ -0.74
TM4SF1-204ENST00000493348 COPS6Q7L5N1 327 aa10.42□□□□□ -0.74
TM4SF1-204ENST00000493348 XAGE3Q8WTP9 111 aa10.42□□□□□ -0.74
TM4SF1-204ENST00000493348 ZBTB3Q9H5J0 574 aa10.42□□□□□ -0.74
TM4SF1-204ENST00000493348 COL24A1Q17RW2 1714 aa10.41□□□□□ -0.74
TM4SF1-204ENST00000493348 CARMIL3Q8ND23 1372 aa10.41□□□□□ -0.74
TM4SF1-204ENST00000493348 ZNF521Q96K83 1311 aa10.41□□□□□ -0.74
TM4SF1-204ENST00000493348 ERVV-1B6SEH8 477 aa10.41□□□□□ -0.74
TM4SF1-204ENST00000493348 CAMTA2O94983 1202 aa10.41□□□□□ -0.74
TM4SF1-204ENST00000493348 ST5P78524 1137 aa10.41□□□□□ -0.74
TM4SF1-204ENST00000493348 SLFN5Q08AF3 891 aa10.41□□□□□ -0.74
TM4SF1-204ENST00000493348 RIC3Q7Z5B4 369 aa10.41□□□□□ -0.74
TM4SF1-204ENST00000493348 TSPYL6Q8N831 410 aa10.41□□□□□ -0.74
TM4SF1-204ENST00000493348 NIP7Q9Y221 180 aaKnown RBP eCLIP10.41□□□□□ -0.74
TM4SF1-204ENST00000493348 ZBED9Q6R2W3 1325 aa10.4□□□□□ -0.74
TM4SF1-204ENST00000493348 RGL2O15211 777 aa10.4□□□□□ -0.74
TM4SF1-204ENST00000493348 SLC4A2P04920 1241 aa10.4□□□□□ -0.74
TM4SF1-204ENST00000493348 PROSER3Q2NL68 480 aa10.4□□□□□ -0.74
TM4SF1-204ENST00000493348 TTLL7Q6ZT98 887 aa10.4□□□□□ -0.74
TM4SF1-204ENST00000493348 ANKRD13DQ6ZTN6 518 aa10.4□□□□□ -0.74
TM4SF1-204ENST00000493348 NBPF5PQ86XG9 351 aaPredicted RBP10.4□□□□□ -0.74
TM4SF1-204ENST00000493348 FHDC1Q9C0D6 1143 aaPredicted RBP10.4□□□□□ -0.74
TM4SF1-204ENST00000493348 NYXQ9GZU5 481 aa10.4□□□□□ -0.74
TM4SF1-204ENST00000493348 FAM177BA6PVY3 158 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 TCERG1O14776 1098 aaKnown RBP10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 ABCB7O75027 752 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 SERPINB2P05120 415 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 CT47B1P0C2W7 299 aaPredicted RBP10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 NEXNQ0ZGT2 675 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 NFIXQ14938 502 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 TBC1D9BQ66K14 1250 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 TPTE2Q6XPS3 522 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 GIGYF2Q6Y7W6 1299 aaKnown RBP10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 PPP1R42Q7Z4L9 355 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 CNBD1Q8NA66 436 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 ZNF428Q96B54 188 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 SGIP1Q9BQI5 828 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 CD2APQ9Y5K6 639 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 AFDNP55196 1824 aaKnown RBP10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 ANKRD36CQ5JPF3 1778 aa10.39□□□□□ -0.75
TM4SF1-204ENST00000493348 POLRMTO00411 1230 aaKnown RBP10.38□□□□□ -0.75
TM4SF1-204ENST00000493348 VAMP4O75379 141 aa10.38□□□□□ -0.75
TM4SF1-204ENST00000493348 TM4SF1P30408 202 aa10.38□□□□□ -0.75
TM4SF1-204ENST00000493348 FKBP5Q13451 457 aaPredicted RBP10.38□□□□□ -0.75
TM4SF1-204ENST00000493348 PDIA6Q15084 440 aa10.38□□□□□ -0.75
TM4SF1-204ENST00000493348 PARP10Q53GL7 1025 aa10.38□□□□□ -0.75
TM4SF1-204ENST00000493348 PLBD2Q8NHP8 589 aa10.38□□□□□ -0.75
TM4SF1-204ENST00000493348 CDCA7LQ96GN5 454 aa10.38□□□□□ -0.75
TM4SF1-204ENST00000493348 GPTP24298 496 aa10.37□□□□□ -0.75
TM4SF1-204ENST00000493348 PDE6BP35913 854 aa10.37□□□□□ -0.75
TM4SF1-204ENST00000493348 HLFQ16534 295 aa10.37□□□□□ -0.75
TM4SF1-204ENST00000493348 YTHDC1Q96MU7 727 aaKnown RBP10.37□□□□□ -0.75
TM4SF1-204ENST00000493348 SYT17Q9BSW7 474 aa10.37□□□□□ -0.75
TM4SF1-204ENST00000493348 PHAXQ9H814 394 aaKnown RBP10.37□□□□□ -0.75
TM4SF1-204ENST00000493348 BCL2L12Q9HB09 334 aa10.37□□□□□ -0.75
TM4SF1-204ENST00000493348 ZNF219Q9P2Y4 722 aaPredicted RBP10.37□□□□□ -0.75
TM4SF1-204ENST00000493348 ARFGEF2Q9Y6D5 1785 aa10.37□□□□□ -0.75
TM4SF1-204ENST00000493348 HSP90B1P14625 803 aaKnown RBP10.36□□□□□ -0.75
TM4SF1-204ENST00000493348 TGFB2P61812 414 aa10.36□□□□□ -0.75
TM4SF1-204ENST00000493348 DDR1Q08345 913 aa10.36□□□□□ -0.75
TM4SF1-204ENST00000493348 FLIIQ13045 1269 aa10.36□□□□□ -0.75
TM4SF1-204ENST00000493348 SMC4Q9NTJ3 1288 aa10.36□□□□□ -0.75
TM4SF1-204ENST00000493348 PDZRN3Q9UPQ7 1066 aa10.36□□□□□ -0.75
TM4SF1-204ENST00000493348 SRCAPQ6ZRS2 3230 aa10.36□□□□□ -0.75
TM4SF1-204ENST00000493348 ATP10DQ9P241 1426 aa10.35□□□□□ -0.75
TM4SF1-204ENST00000493348 H0YIN7 160 aa10.35□□□□□ -0.75
TM4SF1-204ENST00000493348 TCIRG1Q13488 830 aa10.35□□□□□ -0.75
TM4SF1-204ENST00000493348 GPR162Q16538 588 aa10.35□□□□□ -0.75
TM4SF1-204ENST00000493348 ALDH1L2Q3SY69 923 aa10.35□□□□□ -0.75
TM4SF1-204ENST00000493348 KSR2Q6VAB6 950 aa10.35□□□□□ -0.75
TM4SF1-204ENST00000493348 MYD88Q99836 296 aa10.35□□□□□ -0.75
TM4SF1-204ENST00000493348 UTP14AQ9BVJ6 771 aaKnown RBP10.35□□□□□ -0.75
TM4SF1-204ENST00000493348 TRMT112Q9UI30 125 aaKnown RBP10.35□□□□□ -0.75
TM4SF1-204ENST00000493348 MAP3K2Q9Y2U5 619 aa10.35□□□□□ -0.75
TM4SF1-204ENST00000493348 N4BP2Q86UW6 1770 aaPredicted RBP10.34□□□□□ -0.75
TM4SF1-204ENST00000493348 PI4KAP2A4QPH2 592 aa10.34□□□□□ -0.75
TM4SF1-204ENST00000493348 PI4KAP1Q8N8J0 262 aa10.34□□□□□ -0.75
TM4SF1-204ENST00000493348 KIF13BQ9NQT8 1826 aa10.34□□□□□ -0.75
TM4SF1-204ENST00000493348 RNF123Q5XPI4 1314 aa10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 C10orf71Q711Q0 1435 aa10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 NRXN2Q9P2S2 1712 aa10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 ATP5J2-PTCD1G3V325 749 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms