RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 EIF5P55010 431 aaKnown RBP27.84■■■□□ 2.05
PSPC1-204ENST00000492741 SRCIN1Q9C0H9 1055 aa27.84■■■□□ 2.05
PSPC1-204ENST00000492741 DZIP3Q86Y13 1208 aaKnown RBP27.84■■■□□ 2.05
PSPC1-204ENST00000492741 PROM2Q8N271 834 aa27.84■■■□□ 2.05
PSPC1-204ENST00000492741 AK7Q96M32 723 aa27.84■■■□□ 2.05
PSPC1-204ENST00000492741 GNPATO15228 680 aa27.83■■■□□ 2.05
PSPC1-204ENST00000492741 MYD88Q99836 296 aa27.82■■■□□ 2.04
PSPC1-204ENST00000492741 METTL22Q9BUU2 404 aaPredicted RBP27.82■■■□□ 2.04
PSPC1-204ENST00000492741 TBC1D2BQ9UPU7 963 aa27.82■■■□□ 2.04
PSPC1-204ENST00000492741 MYH14Q7Z406 1995 aaKnown RBP27.81■■■□□ 2.04
PSPC1-204ENST00000492741 BEND3Q5T5X7 828 aa27.81■■■□□ 2.04
PSPC1-204ENST00000492741 RTCBQ9Y3I0 505 aaKnown RBP27.81■■■□□ 2.04
PSPC1-204ENST00000492741 PXDNLA1KZ92 1463 aa27.81■■■□□ 2.04
PSPC1-204ENST00000492741 TNS1Q9HBL0 1735 aaKnown RBP27.81■■■□□ 2.04
PSPC1-204ENST00000492741 RPS6KA4O75676 772 aa27.81■■■□□ 2.04
PSPC1-204ENST00000492741 PPP4R2Q9NY27 417 aa27.81■■■□□ 2.04
PSPC1-204ENST00000492741 MAP3K15Q6ZN16 1313 aa27.8■■■□□ 2.04
PSPC1-204ENST00000492741 ZBTB7BO15156 539 aaPredicted RBP27.8■■■□□ 2.04
PSPC1-204ENST00000492741 A0A087WZG4 1122 aa27.79■■■□□ 2.04
PSPC1-204ENST00000492741 EN1Q05925 392 aaPredicted RBP27.79■■■□□ 2.04
PSPC1-204ENST00000492741 AAMPQ13685 434 aa27.79■■■□□ 2.04
PSPC1-204ENST00000492741 LINS1Q8NG48 757 aa27.79■■■□□ 2.04
PSPC1-204ENST00000492741 TAF1LQ8IZX4 1826 aa27.79■■■□□ 2.04
PSPC1-204ENST00000492741 COL15A1P39059 1388 aa27.79■■■□□ 2.04
PSPC1-204ENST00000492741 BAG6P46379 1132 aa27.78■■■□□ 2.04
PSPC1-204ENST00000492741 RREB1Q92766 1687 aa27.78■■■□□ 2.04
PSPC1-204ENST00000492741 ALDH1L1O75891 902 aa27.77■■■□□ 2.04
PSPC1-204ENST00000492741 C4BP0C0L5 1744 aa27.77■■■□□ 2.04
PSPC1-204ENST00000492741 CWF19L2Q2TBE0 894 aaKnown RBP27.77■■■□□ 2.04
PSPC1-204ENST00000492741 ATP10DQ9P241 1426 aa27.77■■■□□ 2.04
PSPC1-204ENST00000492741 ERVV-1B6SEH8 477 aa27.75■■■□□ 2.03
PSPC1-204ENST00000492741 ATP5J2-PTCD1G3V325 749 aa27.75■■■□□ 2.03
PSPC1-204ENST00000492741 EZH2Q15910 746 aaKnown RBP27.75■■■□□ 2.03
PSPC1-204ENST00000492741 ZBTB40Q9NUA8 1239 aa27.75■■■□□ 2.03
PSPC1-204ENST00000492741 PHF14O94880 888 aa27.75■■■□□ 2.03
PSPC1-204ENST00000492741 GIGYF2Q6Y7W6 1299 aaKnown RBP27.75■■■□□ 2.03
PSPC1-204ENST00000492741 SMIM5Q71RC9 77 aa27.75■■■□□ 2.03
PSPC1-204ENST00000492741 MEIS3Q99687 375 aa27.75■■■□□ 2.03
PSPC1-204ENST00000492741 IGKV5-2P06315 115 aa27.74■■■□□ 2.03
PSPC1-204ENST00000492741 HLFQ16534 295 aa27.74■■■□□ 2.03
PSPC1-204ENST00000492741 CCDC125Q86Z20 511 aa27.74■■■□□ 2.03
PSPC1-204ENST00000492741 CCDC136Q96JN2 1154 aa27.74■■■□□ 2.03
PSPC1-204ENST00000492741 CAMKK2Q96RR4 588 aa27.74■■■□□ 2.03
PSPC1-204ENST00000492741 C9orf78Q9NZ63 289 aaPredicted RBP27.74■■■□□ 2.03
PSPC1-204ENST00000492741 TCIRG1Q13488 830 aa27.73■■■□□ 2.03
PSPC1-204ENST00000492741 TRAPPC3LQ5T215 181 aa27.73■■■□□ 2.03
PSPC1-204ENST00000492741 ARFGEF2Q9Y6D5 1785 aa27.73■■■□□ 2.03
PSPC1-204ENST00000492741 NEURL1BA8MQ27 555 aa27.72■■■□□ 2.03
PSPC1-204ENST00000492741 GNAI3P08754 354 aa27.72■■■□□ 2.03
PSPC1-204ENST00000492741 HSP90AB3PQ58FF7 597 aa27.72■■■□□ 2.03
PSPC1-204ENST00000492741 ZPR1O75312 459 aa27.71■■■□□ 2.03
PSPC1-204ENST00000492741 CAMTA2O94983 1202 aa27.71■■■□□ 2.03
PSPC1-204ENST00000492741 DEFB132Q7Z7B7 95 aa27.71■■■□□ 2.03
PSPC1-204ENST00000492741 ARHGEF1Q92888 912 aaKnown RBP27.71■■■□□ 2.03
PSPC1-204ENST00000492741 USP44Q9H0E7 712 aa27.71■■■□□ 2.03
PSPC1-204ENST00000492741 RFC4P35249 363 aa27.7■■■□□ 2.03
PSPC1-204ENST00000492741 B4GALNT3Q6L9W6 998 aa27.7■■■□□ 2.03
PSPC1-204ENST00000492741 TFCP2L1Q9NZI6 479 aa27.7■■■□□ 2.03
PSPC1-204ENST00000492741 ZNF652Q9Y2D9 606 aa27.7■■■□□ 2.03
PSPC1-204ENST00000492741 UBTFL1P0CB47 393 aaPredicted RBP27.7■■■□□ 2.02
PSPC1-204ENST00000492741 C1orf115Q9H7X2 142 aa27.7■■■□□ 2.02
PSPC1-204ENST00000492741 RGPD3A6NKT7 1758 aaPredicted RBP27.69■■■□□ 2.02
PSPC1-204ENST00000492741 RGPD4Q7Z3J3 1758 aa27.69■■■□□ 2.02
PSPC1-204ENST00000492741 NUP188Q5SRE5 1749 aa27.69■■■□□ 2.02
PSPC1-204ENST00000492741 GCKRQ14397 625 aa27.69■■■□□ 2.02
PSPC1-204ENST00000492741 AMIGO3Q86WK7 504 aa27.69■■■□□ 2.02
PSPC1-204ENST00000492741 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.68■■■□□ 2.02
PSPC1-204ENST00000492741 ADRA2BP18089 450 aa27.68■■■□□ 2.02
PSPC1-204ENST00000492741 CWC25Q9NXE8 425 aaPredicted RBP27.68■■■□□ 2.02
PSPC1-204ENST00000492741 GRM8O00222 908 aa27.67■■■□□ 2.02
PSPC1-204ENST00000492741 GPTP24298 496 aa27.67■■■□□ 2.02
PSPC1-204ENST00000492741 SSFA2P28290 1259 aa27.67■■■□□ 2.02
PSPC1-204ENST00000492741 CCDC191Q8NCU4 936 aa27.67■■■□□ 2.02
PSPC1-204ENST00000492741 NARFQ9UHQ1 456 aa27.67■■■□□ 2.02
PSPC1-204ENST00000492741 N4BP2Q86UW6 1770 aaPredicted RBP27.67■■■□□ 2.02
PSPC1-204ENST00000492741 GNAI2P04899 355 aa27.67■■■□□ 2.02
PSPC1-204ENST00000492741 ISCA1Q9BUE6 129 aa27.67■■■□□ 2.02
PSPC1-204ENST00000492741 PCDHB15Q9Y5E8 787 aa27.67■■■□□ 2.02
PSPC1-204ENST00000492741 NBPF7P0C2Y1 421 aaPredicted RBP27.66■■■□□ 2.02
PSPC1-204ENST00000492741 ZNF827Q17R98 1081 aa27.66■■■□□ 2.02
PSPC1-204ENST00000492741 USPL1Q5W0Q7 1092 aa27.66■■■□□ 2.02
PSPC1-204ENST00000492741 CLEC4GQ6UXB4 293 aa27.65■■■□□ 2.02
PSPC1-204ENST00000492741 AKT1S1Q96B36 256 aa27.65■■■□□ 2.02
PSPC1-204ENST00000492741 SRP68Q9UHB9 627 aaKnown RBP27.65■■■□□ 2.02
PSPC1-204ENST00000492741 HDAC5Q9UQL6 1122 aa27.65■■■□□ 2.02
PSPC1-204ENST00000492741 TRIM28Q13263 835 aaKnown RBP27.64■■■□□ 2.02
PSPC1-204ENST00000492741 NIP7Q9Y221 180 aaKnown RBP eCLIP27.62■■■□□ 2.01
PSPC1-204ENST00000492741 LRRFIP2Q9Y608 721 aaKnown RBP27.62■■■□□ 2.01
PSPC1-204ENST00000492741 AFDNP55196 1824 aaKnown RBP27.62■■■□□ 2.01
PSPC1-204ENST00000492741 NUP98P52948 1817 aa27.62■■■□□ 2.01
PSPC1-204ENST00000492741 MSH5O43196 834 aa27.61■■■□□ 2.01
PSPC1-204ENST00000492741 NLRP10Q86W26 655 aa27.61■■■□□ 2.01
PSPC1-204ENST00000492741 ZNF34Q8IZ26 560 aa27.61■■■□□ 2.01
PSPC1-204ENST00000492741 JARID2Q92833 1246 aaPredicted RBP27.61■■■□□ 2.01
PSPC1-204ENST00000492741 STK32BQ9NY57 414 aa27.61■■■□□ 2.01
PSPC1-204ENST00000492741 USP42Q9H9J4 1324 aaKnown RBP27.61■■■□□ 2.01
PSPC1-204ENST00000492741 UBR3Q6ZT12 1888 aa27.61■■■□□ 2.01
PSPC1-204ENST00000492741 RTL5Q5HYW3 569 aaPredicted RBP27.61■■■□□ 2.01
PSPC1-204ENST00000492741 UBE3BQ7Z3V4 1068 aa27.61■■■□□ 2.01
PSPC1-204ENST00000492741 IBTKQ9P2D0 1353 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms