RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 MYL6BP14649 208 aa15.34■□□□□ 0.05
PTPN7-214ENST00000491584 EXOSC9Q06265 439 aaKnown RBP15.34■□□□□ 0.05
PTPN7-214ENST00000491584 DZIP3Q86Y13 1208 aaKnown RBP15.34■□□□□ 0.05
PTPN7-214ENST00000491584 ZNF428Q96B54 188 aa15.34■□□□□ 0.05
PTPN7-214ENST00000491584 ARFGEF1Q9Y6D6 1849 aa15.33■□□□□ 0.05
PTPN7-214ENST00000491584 A0A0G2JLW4 131 aa15.33■□□□□ 0.04
PTPN7-214ENST00000491584 CT47B1P0C2W7 299 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-214ENST00000491584 HSPA6P17066 643 aa15.33■□□□□ 0.04
PTPN7-214ENST00000491584 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
PTPN7-214ENST00000491584 SIPA1L3O60292 1781 aaPredicted RBP15.32■□□□□ 0.04
PTPN7-214ENST00000491584 DDX58O95786 925 aaKnown RBP15.32■□□□□ 0.04
PTPN7-214ENST00000491584 DPEP1P16444 411 aa15.32■□□□□ 0.04
PTPN7-214ENST00000491584 KRT24Q2M2I5 525 aa15.32■□□□□ 0.04
PTPN7-214ENST00000491584 CLEC4GQ6UXB4 293 aa15.32■□□□□ 0.04
PTPN7-214ENST00000491584 TBC1D2BQ9UPU7 963 aa15.32■□□□□ 0.04
PTPN7-214ENST00000491584 ZBED9Q6R2W3 1325 aa15.32■□□□□ 0.04
PTPN7-214ENST00000491584 USP42Q9H9J4 1324 aaKnown RBP15.32■□□□□ 0.04
PTPN7-214ENST00000491584 NBPF26B4DH59 902 aa15.31■□□□□ 0.04
PTPN7-214ENST00000491584 ERVV-1B6SEH8 477 aa15.31■□□□□ 0.04
PTPN7-214ENST00000491584 DDR1Q08345 913 aa15.31■□□□□ 0.04
PTPN7-214ENST00000491584 IFFO2Q5TF58 517 aa15.31■□□□□ 0.04
PTPN7-214ENST00000491584 NBPF10Q6P3W6 841 aaKnown RBP15.31■□□□□ 0.04
PTPN7-214ENST00000491584 NBPF15Q8N660 670 aa15.31■□□□□ 0.04
PTPN7-214ENST00000491584 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
PTPN7-214ENST00000491584 COL15A1P39059 1388 aa15.31■□□□□ 0.04
PTPN7-214ENST00000491584 VIRMAQ69YN4 1812 aaKnown RBP15.31■□□□□ 0.04
PTPN7-214ENST00000491584 VAMP4O75379 141 aa15.3■□□□□ 0.04
PTPN7-214ENST00000491584 FKBP8Q14318 412 aa15.3■□□□□ 0.04
PTPN7-214ENST00000491584 USPL1Q5W0Q7 1092 aa15.3■□□□□ 0.04
PTPN7-214ENST00000491584 CHPF2Q9P2E5 772 aa15.3■□□□□ 0.04
PTPN7-214ENST00000491584 NRXN2Q9P2S2 1712 aa15.3■□□□□ 0.04
PTPN7-214ENST00000491584 BCS1LQ9Y276 419 aa15.3■□□□□ 0.04
PTPN7-214ENST00000491584 PARP3Q9Y6F1 533 aa15.3■□□□□ 0.04
PTPN7-214ENST00000491584 UBR2Q8IWV8 1755 aa15.29■□□□□ 0.04
PTPN7-214ENST00000491584 SLC4A2P04920 1241 aa15.29■□□□□ 0.04
PTPN7-214ENST00000491584 HSP90AB3PQ58FF7 597 aa15.29■□□□□ 0.04
PTPN7-214ENST00000491584 COPS6Q7L5N1 327 aa15.29■□□□□ 0.04
PTPN7-214ENST00000491584 TRMT2AQ8IZ69 625 aaKnown RBP15.29■□□□□ 0.04
PTPN7-214ENST00000491584 TSPYL6Q8N831 410 aa15.29■□□□□ 0.04
PTPN7-214ENST00000491584 CDCA7LQ96GN5 454 aa15.29■□□□□ 0.04
PTPN7-214ENST00000491584 SETDB2Q96T68 719 aa15.29■□□□□ 0.04
PTPN7-214ENST00000491584 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
PTPN7-214ENST00000491584 NPHP1O15259 732 aa15.28■□□□□ 0.04
PTPN7-214ENST00000491584 PIP4K2AP48426 406 aaPredicted RBP15.28■□□□□ 0.04
PTPN7-214ENST00000491584 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
PTPN7-214ENST00000491584 ANKRD13DQ6ZTN6 518 aa15.28■□□□□ 0.04
PTPN7-214ENST00000491584 POLRMTO00411 1230 aaKnown RBP15.27■□□□□ 0.04
PTPN7-214ENST00000491584 TM4SF1P30408 202 aa15.27■□□□□ 0.04
PTPN7-214ENST00000491584 PDIA6Q15084 440 aa15.27■□□□□ 0.04
PTPN7-214ENST00000491584 XAGE3Q8WTP9 111 aa15.27■□□□□ 0.04
PTPN7-214ENST00000491584 KDM3BQ7LBC6 1761 aa15.26■□□□□ 0.03
PTPN7-214ENST00000491584 MAP3K15Q6ZN16 1313 aa15.26■□□□□ 0.03
PTPN7-214ENST00000491584 RIC3Q7Z5B4 369 aa15.26■□□□□ 0.03
PTPN7-214ENST00000491584 PLBD2Q8NHP8 589 aa15.26■□□□□ 0.03
PTPN7-214ENST00000491584 AFDNP55196 1824 aaKnown RBP15.26■□□□□ 0.03
PTPN7-214ENST00000491584 DLEC1Q9Y238 1755 aa15.26■□□□□ 0.03
PTPN7-214ENST00000491584 CAMTA2O94983 1202 aa15.25■□□□□ 0.03
PTPN7-214ENST00000491584 GTF2E1P29083 439 aaPredicted RBP15.25■□□□□ 0.03
PTPN7-214ENST00000491584 NMRK2Q9NPI5 230 aa15.25■□□□□ 0.03
PTPN7-214ENST00000491584 PCNTO95613 3336 aa15.24■□□□□ 0.03
PTPN7-214ENST00000491584 NEXNQ0ZGT2 675 aa15.24■□□□□ 0.03
PTPN7-214ENST00000491584 ALDH1L2Q3SY69 923 aa15.24■□□□□ 0.03
PTPN7-214ENST00000491584 TPTE2Q6XPS3 522 aa15.24■□□□□ 0.03
PTPN7-214ENST00000491584 GIGYF2Q6Y7W6 1299 aaKnown RBP15.24■□□□□ 0.03
PTPN7-214ENST00000491584 BICDL1Q6ZP65 573 aa15.24■□□□□ 0.03
PTPN7-214ENST00000491584 ARHGAP27Q6ZUM4 889 aa15.24■□□□□ 0.03
PTPN7-214ENST00000491584 ZBTB3Q9H5J0 574 aa15.24■□□□□ 0.03
PTPN7-214ENST00000491584 SBF1O95248 1867 aa15.23■□□□□ 0.03
PTPN7-214ENST00000491584 ANXA1P04083 346 aa15.23■□□□□ 0.03
PTPN7-214ENST00000491584 CHRNA5P30532 468 aa15.23■□□□□ 0.03
PTPN7-214ENST00000491584 PROSER3Q2NL68 480 aa15.23■□□□□ 0.03
PTPN7-214ENST00000491584 PARP10Q53GL7 1025 aa15.23■□□□□ 0.03
PTPN7-214ENST00000491584 TTLL7Q6ZT98 887 aa15.23■□□□□ 0.03
PTPN7-214ENST00000491584 DNAJC5GQ8N7S2 189 aa15.23■□□□□ 0.03
PTPN7-214ENST00000491584 NYXQ9GZU5 481 aa15.23■□□□□ 0.03
PTPN7-214ENST00000491584 BCL2L12Q9HB09 334 aa15.23■□□□□ 0.03
PTPN7-214ENST00000491584 NIP7Q9Y221 180 aaKnown RBP eCLIP15.23■□□□□ 0.03
PTPN7-214ENST00000491584 TCERG1O14776 1098 aaKnown RBP15.22■□□□□ 0.03
PTPN7-214ENST00000491584 TOMM70O94826 608 aa15.22■□□□□ 0.03
PTPN7-214ENST00000491584 HSP90B1P14625 803 aaKnown RBP15.22■□□□□ 0.03
PTPN7-214ENST00000491584 FKBP5Q13451 457 aaPredicted RBP15.22■□□□□ 0.03
PTPN7-214ENST00000491584 NFIXQ14938 502 aa15.22■□□□□ 0.03
PTPN7-214ENST00000491584 C9orf131Q5VYM1 1079 aa15.22■□□□□ 0.03
PTPN7-214ENST00000491584 KSR2Q6VAB6 950 aa15.22■□□□□ 0.03
PTPN7-214ENST00000491584 PPP1R42Q7Z4L9 355 aa15.22■□□□□ 0.03
PTPN7-214ENST00000491584 YTHDC1Q96MU7 727 aaKnown RBP15.22■□□□□ 0.03
PTPN7-214ENST00000491584 PIM2Q9P1W9 311 aa15.22■□□□□ 0.03
PTPN7-214ENST00000491584 WDR90Q96KV7 1748 aa15.22■□□□□ 0.03
PTPN7-214ENST00000491584 IPO8O15397 1037 aaKnown RBP15.21■□□□□ 0.03
PTPN7-214ENST00000491584 SERPINB2P05120 415 aa15.21■□□□□ 0.03
PTPN7-214ENST00000491584 TCIRG1Q13488 830 aa15.21■□□□□ 0.03
PTPN7-214ENST00000491584 NBPF5PQ86XG9 351 aaPredicted RBP15.21■□□□□ 0.03
PTPN7-214ENST00000491584 PHAXQ9H814 394 aaKnown RBP15.21■□□□□ 0.03
PTPN7-214ENST00000491584 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.03
PTPN7-214ENST00000491584 SCN7AQ01118 1682 aa15.21■□□□□ 0.03
PTPN7-214ENST00000491584 TNRC6CQ9HCJ0 1690 aaKnown RBP15.2■□□□□ 0.02
PTPN7-214ENST00000491584 PRELPP51888 382 aa15.2■□□□□ 0.02
PTPN7-214ENST00000491584 ST5P78524 1137 aa15.2■□□□□ 0.02
PTPN7-214ENST00000491584 FLIIQ13045 1269 aa15.2■□□□□ 0.02
PTPN7-214ENST00000491584 DALRD3Q5D0E6 543 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms