RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 C16orf71Q8IYS4 520 aaPredicted RBP10.95□□□□□ -0.66
APP-216ENST00000491395 RBM46Q8TBY0 533 aaKnown RBP10.95□□□□□ -0.66
APP-216ENST00000491395 RRP7AQ9Y3A4 280 aaKnown RBP10.95□□□□□ -0.66
APP-216ENST00000491395 BRCA1P38398 1863 aaKnown RBP10.95□□□□□ -0.66
APP-216ENST00000491395 VIRMAQ69YN4 1812 aaKnown RBP10.95□□□□□ -0.66
APP-216ENST00000491395 AFDNP55196 1824 aaKnown RBP10.94□□□□□ -0.66
APP-216ENST00000491395 RIPK4P57078 832 aa10.94□□□□□ -0.66
APP-216ENST00000491395 TPTE2Q6XPS3 522 aa10.94□□□□□ -0.66
APP-216ENST00000491395 CNKSR1Q969H4 720 aa10.94□□□□□ -0.66
APP-216ENST00000491395 MASTLQ96GX5 879 aa10.94□□□□□ -0.66
APP-216ENST00000491395 ARFGEF1Q9Y6D6 1849 aa10.93□□□□□ -0.66
APP-216ENST00000491395 CEP350Q5VT06 3117 aa10.93□□□□□ -0.66
APP-216ENST00000491395 GLTPD2A6NH11 291 aa10.93□□□□□ -0.66
APP-216ENST00000491395 RGL2O15211 777 aa10.93□□□□□ -0.66
APP-216ENST00000491395 MYL6BP14649 208 aa10.93□□□□□ -0.66
APP-216ENST00000491395 APLP1P51693 650 aa10.93□□□□□ -0.66
APP-216ENST00000491395 PRPF40BQ6NWY9 871 aaKnown RBP10.93□□□□□ -0.66
APP-216ENST00000491395 TTLL7Q6ZT98 887 aa10.93□□□□□ -0.66
APP-216ENST00000491395 ZC3H4Q9UPT8 1303 aaKnown RBP10.92□□□□□ -0.66
APP-216ENST00000491395 KLRG2A4D1S0 409 aaPredicted RBP10.92□□□□□ -0.66
APP-216ENST00000491395 NPR1P16066 1061 aa10.92□□□□□ -0.66
APP-216ENST00000491395 C7orf43Q8WVR3 580 aa10.92□□□□□ -0.66
APP-216ENST00000491395 TSPYL4Q9UJ04 414 aa10.92□□□□□ -0.66
APP-216ENST00000491395 ERVV-1B6SEH8 477 aa10.91□□□□□ -0.66
APP-216ENST00000491395 VEGFAP15692 232 aaPredicted RBP10.91□□□□□ -0.66
APP-216ENST00000491395 GTF2E1P29083 439 aaPredicted RBP10.91□□□□□ -0.66
APP-216ENST00000491395 TMPOP42166 694 aaKnown RBP10.91□□□□□ -0.66
APP-216ENST00000491395 HTRA3P83110 453 aa10.91□□□□□ -0.66
APP-216ENST00000491395 FSTL1Q12841 308 aa10.91□□□□□ -0.66
APP-216ENST00000491395 ERFEQ4G0M1 354 aa10.91□□□□□ -0.66
APP-216ENST00000491395 OLFM4Q6UX06 510 aa10.91□□□□□ -0.66
APP-216ENST00000491395 CCDC146Q8IYE0 955 aa10.91□□□□□ -0.66
APP-216ENST00000491395 DNAJC5GQ8N7S2 189 aa10.91□□□□□ -0.66
APP-216ENST00000491395 TAOK3Q9H2K8 898 aa10.91□□□□□ -0.66
APP-216ENST00000491395 ZBTB3Q9H5J0 574 aa10.91□□□□□ -0.66
APP-216ENST00000491395 SCN7AQ01118 1682 aa10.91□□□□□ -0.66
APP-216ENST00000491395 MAP3K15Q6ZN16 1313 aa10.9□□□□□ -0.66
APP-216ENST00000491395 MYBBP1AQ9BQG0 1328 aaKnown RBP10.9□□□□□ -0.66
APP-216ENST00000491395 POTECB2RU33 542 aa10.9□□□□□ -0.66
APP-216ENST00000491395 EIF2S2P20042 333 aaKnown RBP10.9□□□□□ -0.66
APP-216ENST00000491395 GPTP24298 496 aa10.9□□□□□ -0.66
APP-216ENST00000491395 DPY19L2Q6NUT2 758 aa10.9□□□□□ -0.66
APP-216ENST00000491395 KIF6Q6ZMV9 814 aa10.9□□□□□ -0.66
APP-216ENST00000491395 NUTM1Q86Y26 1132 aa10.9□□□□□ -0.66
APP-216ENST00000491395 LTBP3Q9NS15 1303 aa10.89□□□□□ -0.67
APP-216ENST00000491395 ANXA1P04083 346 aa10.89□□□□□ -0.67
APP-216ENST00000491395 PDIA6Q15084 440 aa10.89□□□□□ -0.67
APP-216ENST00000491395 NEUROD2Q15784 382 aa10.89□□□□□ -0.67
APP-216ENST00000491395 SOGA3Q5TF21 947 aa10.89□□□□□ -0.67
APP-216ENST00000491395 SMC1BQ8NDV3 1235 aa10.89□□□□□ -0.67
APP-216ENST00000491395 ANKRD31Q8N7Z5 1873 aa10.89□□□□□ -0.67
APP-216ENST00000491395 LMOD3Q0VAK6 560 aa10.88□□□□□ -0.67
APP-216ENST00000491395 PROSER3Q2NL68 480 aa10.88□□□□□ -0.67
APP-216ENST00000491395 CCDC93Q567U6 631 aa10.88□□□□□ -0.67
APP-216ENST00000491395 SUSD4Q5VX71 490 aa10.88□□□□□ -0.67
APP-216ENST00000491395 LRP10Q7Z4F1 713 aa10.88□□□□□ -0.67
APP-216ENST00000491395 ZNF34Q8IZ26 560 aa10.88□□□□□ -0.67
APP-216ENST00000491395 NYXQ9GZU5 481 aa10.88□□□□□ -0.67
APP-216ENST00000491395 BABAM1Q9NWV8 329 aa10.88□□□□□ -0.67
APP-216ENST00000491395 ABCC12Q96J65 1359 aa10.88□□□□□ -0.67
APP-216ENST00000491395 ERBB4Q15303 1308 aa10.87□□□□□ -0.67
APP-216ENST00000491395 UBN2Q6ZU65 1347 aa10.87□□□□□ -0.67
APP-216ENST00000491395 DDNO94850 711 aaPredicted RBP10.87□□□□□ -0.67
APP-216ENST00000491395 ALDH1B1P30837 517 aa10.87□□□□□ -0.67
APP-216ENST00000491395 WDR43Q15061 677 aaKnown RBP eCLIP10.87□□□□□ -0.67
APP-216ENST00000491395 KRT24Q2M2I5 525 aa10.87□□□□□ -0.67
APP-216ENST00000491395 CRY2Q49AN0 593 aa10.87□□□□□ -0.67
APP-216ENST00000491395 GIGYF2Q6Y7W6 1299 aaKnown RBP10.87□□□□□ -0.67
APP-216ENST00000491395 NECTIN2Q92692 538 aa10.87□□□□□ -0.67
APP-216ENST00000491395 RUNDC1Q96C34 613 aa10.87□□□□□ -0.67
APP-216ENST00000491395 ZNF277Q9NRM2 450 aaPredicted RBP10.87□□□□□ -0.67
APP-216ENST00000491395 ADAMTS8Q9UP79 889 aa10.87□□□□□ -0.67
APP-216ENST00000491395 TRIM35Q9UPQ4 493 aa10.87□□□□□ -0.67
APP-216ENST00000491395 LAS1LQ9Y4W2 734 aaKnown RBP10.87□□□□□ -0.67
APP-216ENST00000491395 SBF1O95248 1867 aa10.87□□□□□ -0.67
APP-216ENST00000491395 DLEC1Q9Y238 1755 aa10.86□□□□□ -0.67
APP-216ENST00000491395 CHL1O00533 1208 aa10.86□□□□□ -0.67
APP-216ENST00000491395 FKBP4Q02790 459 aaKnown RBP eCLIP10.86□□□□□ -0.67
APP-216ENST00000491395 C3orf67Q6ZVT6 689 aa10.86□□□□□ -0.67
APP-216ENST00000491395 COL11A2P13942 1736 aaPredicted RBP10.86□□□□□ -0.67
APP-216ENST00000491395 SLX4Q8IY92 1834 aa10.86□□□□□ -0.67
APP-216ENST00000491395 BCORQ6W2J9 1755 aa10.85□□□□□ -0.67
APP-216ENST00000491395 NTSR2O95665 410 aa10.85□□□□□ -0.67
APP-216ENST00000491395 HOXA10P31260 410 aaPredicted RBP10.85□□□□□ -0.67
APP-216ENST00000491395 AIMP1Q12904 312 aaKnown RBP10.85□□□□□ -0.67
APP-216ENST00000491395 COPS6Q7L5N1 327 aa10.85□□□□□ -0.67
APP-216ENST00000491395 SLC51AQ86UW1 340 aa10.85□□□□□ -0.67
APP-216ENST00000491395 RTKN2Q8IZC4 609 aa10.85□□□□□ -0.67
APP-216ENST00000491395 SYNE4Q8N205 404 aa10.85□□□□□ -0.67
APP-216ENST00000491395 XAGE3Q8WTP9 111 aa10.85□□□□□ -0.67
APP-216ENST00000491395 PRKRIP1Q9H875 184 aaPredicted RBP10.85□□□□□ -0.67
APP-216ENST00000491395 TCERG1O14776 1098 aaKnown RBP10.84□□□□□ -0.67
APP-216ENST00000491395 POTEIP0CG38 1075 aa10.84□□□□□ -0.67
APP-216ENST00000491395 POTEJP0CG39 1038 aa10.84□□□□□ -0.67
APP-216ENST00000491395 PARP10Q53GL7 1025 aa10.84□□□□□ -0.67
APP-216ENST00000491395 PPP1R42Q7Z4L9 355 aa10.84□□□□□ -0.67
APP-216ENST00000491395 RPGRQ92834 1020 aaKnown RBP10.84□□□□□ -0.67
APP-216ENST00000491395 KLRG1Q96E93 195 aa10.84□□□□□ -0.67
APP-216ENST00000491395 UTP14AQ9BVJ6 771 aaKnown RBP10.84□□□□□ -0.67
APP-216ENST00000491395 ZNF541Q9H0D2 1346 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms