RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 ANXA1P04083 346 aa24.13■■□□□ 1.45
NDUFB4-204ENST00000491335 CHRNA5P30532 468 aa24.13■■□□□ 1.45
NDUFB4-204ENST00000491335 CCDC27Q2M243 656 aa24.13■■□□□ 1.45
NDUFB4-204ENST00000491335 PROSER3Q2NL68 480 aa24.13■■□□□ 1.45
NDUFB4-204ENST00000491335 WWC1Q8IX03 1113 aa24.13■■□□□ 1.45
NDUFB4-204ENST00000491335 CARMIL3Q8ND23 1372 aa24.13■■□□□ 1.45
NDUFB4-204ENST00000491335 RGL2O15211 777 aa24.12■■□□□ 1.45
NDUFB4-204ENST00000491335 LRP10Q7Z4F1 713 aa24.12■■□□□ 1.45
NDUFB4-204ENST00000491335 CCDC24Q8N4L8 307 aa24.12■■□□□ 1.45
NDUFB4-204ENST00000491335 BCS1LQ9Y276 419 aa24.12■■□□□ 1.45
NDUFB4-204ENST00000491335 MAP3K15Q6ZN16 1313 aa24.11■■□□□ 1.45
NDUFB4-204ENST00000491335 BRCA1P38398 1863 aaKnown RBP24.11■■□□□ 1.45
NDUFB4-204ENST00000491335 ERVV-1B6SEH8 477 aa24.11■■□□□ 1.45
NDUFB4-204ENST00000491335 DUSP27Q5VZP5 1158 aa24.11■■□□□ 1.45
NDUFB4-204ENST00000491335 PRR5LQ6MZQ0 368 aa24.11■■□□□ 1.45
NDUFB4-204ENST00000491335 KIF6Q6ZMV9 814 aa24.11■■□□□ 1.45
NDUFB4-204ENST00000491335 PIM2Q9P1W9 311 aa24.11■■□□□ 1.45
NDUFB4-204ENST00000491335 NUP98P52948 1817 aa24.11■■□□□ 1.45
NDUFB4-204ENST00000491335 NIP7Q9Y221 180 aaKnown RBP eCLIP24.1■■□□□ 1.45
NDUFB4-204ENST00000491335 SALL2Q9Y467 1007 aaPredicted RBP24.1■■□□□ 1.45
NDUFB4-204ENST00000491335 HOXB7P09629 217 aa24.09■■□□□ 1.45
NDUFB4-204ENST00000491335 NCBP3Q53F19 620 aaKnown RBP24.09■■□□□ 1.45
NDUFB4-204ENST00000491335 ZBTB3Q9H5J0 574 aa24.09■■□□□ 1.45
NDUFB4-204ENST00000491335 HDGFL1Q5TGJ6 251 aa24.08■■□□□ 1.45
NDUFB4-204ENST00000491335 CNBD1Q8NA66 436 aa24.08■■□□□ 1.45
NDUFB4-204ENST00000491335 DDX21Q9NR30 783 aaKnown RBP eCLIP24.08■■□□□ 1.45
NDUFB4-204ENST00000491335 ANKRD31Q8N7Z5 1873 aa24.08■■□□□ 1.45
NDUFB4-204ENST00000491335 ELL2O00472 640 aaPredicted RBP24.07■■□□□ 1.44
NDUFB4-204ENST00000491335 NPHP1O15259 732 aa24.07■■□□□ 1.44
NDUFB4-204ENST00000491335 NBPF5PQ86XG9 351 aaPredicted RBP24.07■■□□□ 1.44
NDUFB4-204ENST00000491335 C2CD5Q86YS7 1000 aa24.07■■□□□ 1.44
NDUFB4-204ENST00000491335 BRIP1Q9BX63 1249 aa24.07■■□□□ 1.44
NDUFB4-204ENST00000491335 DALRD3Q5D0E6 543 aaKnown RBP24.06■■□□□ 1.44
NDUFB4-204ENST00000491335 COPS6Q7L5N1 327 aa24.06■■□□□ 1.44
NDUFB4-204ENST00000491335 C8orf58Q8NAV2 365 aa24.06■■□□□ 1.44
NDUFB4-204ENST00000491335 CHPF2Q9P2E5 772 aa24.06■■□□□ 1.44
NDUFB4-204ENST00000491335 FAM177BA6PVY3 158 aa24.05■■□□□ 1.44
NDUFB4-204ENST00000491335 H0YIN7 160 aa24.05■■□□□ 1.44
NDUFB4-204ENST00000491335 AIMP1Q12904 312 aaKnown RBP24.05■■□□□ 1.44
NDUFB4-204ENST00000491335 GIGYF2Q6Y7W6 1299 aaKnown RBP24.05■■□□□ 1.44
NDUFB4-204ENST00000491335 XAGE3Q8WTP9 111 aa24.05■■□□□ 1.44
NDUFB4-204ENST00000491335 PDE6BP35913 854 aa24.04■■□□□ 1.44
NDUFB4-204ENST00000491335 ST5P78524 1137 aa24.04■■□□□ 1.44
NDUFB4-204ENST00000491335 TPTE2Q6XPS3 522 aa24.04■■□□□ 1.44
NDUFB4-204ENST00000491335 TSR2Q969E8 191 aaKnown RBP24.04■■□□□ 1.44
NDUFB4-204ENST00000491335 GPTP24298 496 aa24.03■■□□□ 1.44
NDUFB4-204ENST00000491335 DBF4Q9UBU7 674 aaPredicted RBP24.03■■□□□ 1.44
NDUFB4-204ENST00000491335 IL16Q14005 1332 aa24.03■■□□□ 1.44
NDUFB4-204ENST00000491335 ARFGEF1Q9Y6D6 1849 aa24.03■■□□□ 1.44
NDUFB4-204ENST00000491335 ATP10DQ9P241 1426 aa24.01■■□□□ 1.43
NDUFB4-204ENST00000491335 DLEC1Q9Y238 1755 aa24.01■■□□□ 1.43
NDUFB4-204ENST00000491335 ARHGAP27Q6ZUM4 889 aa24.01■■□□□ 1.43
NDUFB4-204ENST00000491335 WDR63Q8IWG1 891 aa24.01■■□□□ 1.43
NDUFB4-204ENST00000491335 ZNF34Q8IZ26 560 aa24.01■■□□□ 1.43
NDUFB4-204ENST00000491335 TSPYL6Q8N831 410 aa24.01■■□□□ 1.43
NDUFB4-204ENST00000491335 PDZRN3Q9UPQ7 1066 aa24.01■■□□□ 1.43
NDUFB4-204ENST00000491335 ZNF622Q969S3 477 aaKnown RBP eCLIP24■■□□□ 1.43
NDUFB4-204ENST00000491335 UBN2Q6ZU65 1347 aa24■■□□□ 1.43
NDUFB4-204ENST00000491335 GTF2E1P29083 439 aaPredicted RBP23.99■■□□□ 1.43
NDUFB4-204ENST00000491335 TTLL6Q8N841 843 aa23.99■■□□□ 1.43
NDUFB4-204ENST00000491335 HYPKQ9NX55 129 aa23.99■■□□□ 1.43
NDUFB4-204ENST00000491335 SUSD4Q5VX71 490 aa23.98■■□□□ 1.43
NDUFB4-204ENST00000491335 ZNF784Q8NCA9 323 aaPredicted RBP23.98■■□□□ 1.43
NDUFB4-204ENST00000491335 NYXQ9GZU5 481 aa23.98■■□□□ 1.43
NDUFB4-204ENST00000491335 CCER2I3L3R5 266 aa23.97■■□□□ 1.43
NDUFB4-204ENST00000491335 COL11A2P13942 1736 aaPredicted RBP23.97■■□□□ 1.43
NDUFB4-204ENST00000491335 NUTM1Q86Y26 1132 aa23.97■■□□□ 1.43
NDUFB4-204ENST00000491335 SRGNP10124 158 aa23.96■■□□□ 1.43
NDUFB4-204ENST00000491335 TCIRG1Q13488 830 aa23.95■■□□□ 1.42
NDUFB4-204ENST00000491335 ERFEQ4G0M1 354 aa23.95■■□□□ 1.42
NDUFB4-204ENST00000491335 PARP10Q53GL7 1025 aa23.95■■□□□ 1.42
NDUFB4-204ENST00000491335 CCDC30Q5VVM6 783 aa23.95■■□□□ 1.42
NDUFB4-204ENST00000491335 ANKRD13DQ6ZTN6 518 aa23.95■■□□□ 1.42
NDUFB4-204ENST00000491335 PLBD2Q8NHP8 589 aa23.95■■□□□ 1.42
NDUFB4-204ENST00000491335 FANCIQ9NVI1 1328 aa23.94■■□□□ 1.42
NDUFB4-204ENST00000491335 KLRG2A4D1S0 409 aaPredicted RBP23.94■■□□□ 1.42
NDUFB4-204ENST00000491335 HSP90AB3PQ58FF7 597 aa23.94■■□□□ 1.42
NDUFB4-204ENST00000491335 STYK1Q6J9G0 422 aa23.94■■□□□ 1.42
NDUFB4-204ENST00000491335 CHMP4AQ9BY43 222 aa23.94■■□□□ 1.42
NDUFB4-204ENST00000491335 PHAXQ9H814 394 aaKnown RBP23.94■■□□□ 1.42
NDUFB4-204ENST00000491335 SPINK5Q9NQ38 1064 aaPredicted RBP23.94■■□□□ 1.42
NDUFB4-204ENST00000491335 NTSR2O95665 410 aa23.93■■□□□ 1.42
NDUFB4-204ENST00000491335 TWISTNBQ3B726 338 aaPredicted RBP23.93■■□□□ 1.42
NDUFB4-204ENST00000491335 PPP1R42Q7Z4L9 355 aa23.93■■□□□ 1.42
NDUFB4-204ENST00000491335 MASTLQ96GX5 879 aa23.93■■□□□ 1.42
NDUFB4-204ENST00000491335 ANKRD36CQ5JPF3 1778 aa23.93■■□□□ 1.42
NDUFB4-204ENST00000491335 ABCC12Q96J65 1359 aa23.92■■□□□ 1.42
NDUFB4-204ENST00000491335 IBTKQ9P2D0 1353 aaPredicted RBP23.92■■□□□ 1.42
NDUFB4-204ENST00000491335 DIEXFQ68CQ4 756 aaKnown RBP23.92■■□□□ 1.42
NDUFB4-204ENST00000491335 CNKSR1Q969H4 720 aa23.92■■□□□ 1.42
NDUFB4-204ENST00000491335 TCERG1O14776 1098 aaKnown RBP23.91■■□□□ 1.42
NDUFB4-204ENST00000491335 NPR1P16066 1061 aa23.91■■□□□ 1.42
NDUFB4-204ENST00000491335 NLRP10Q86W26 655 aa23.91■■□□□ 1.42
NDUFB4-204ENST00000491335 UTP14AQ9BVJ6 771 aaKnown RBP23.91■■□□□ 1.42
NDUFB4-204ENST00000491335 ZNF219Q9P2Y4 722 aaPredicted RBP23.91■■□□□ 1.42
NDUFB4-204ENST00000491335 SLX4Q8IY92 1834 aa23.91■■□□□ 1.42
NDUFB4-204ENST00000491335 CACNA1SQ13698 1873 aa23.9■■□□□ 1.42
NDUFB4-204ENST00000491335 GOLGA2Q08379 1002 aa23.9■■□□□ 1.42
NDUFB4-204ENST00000491335 EXOSC9Q06265 439 aaKnown RBP23.89■■□□□ 1.41
NDUFB4-204ENST00000491335 TNRC6CQ9HCJ0 1690 aaKnown RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms