RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 RSPH6AQ9H0K4 717 aa15.71■□□□□ 0.11
FDPS-215ENST00000490140 CAMTA2O94983 1202 aa15.7■□□□□ 0.1
FDPS-215ENST00000490140 SNRPA1P09661 255 aaKnown RBP15.7■□□□□ 0.1
FDPS-215ENST00000490140 NBPF5PQ86XG9 351 aaPredicted RBP15.7■□□□□ 0.1
FDPS-215ENST00000490140 MASTLQ96GX5 879 aa15.7■□□□□ 0.1
FDPS-215ENST00000490140 IQCA1LA6NCM1 817 aa15.69■□□□□ 0.1
FDPS-215ENST00000490140 HTATSF1O43719 755 aaKnown RBP15.69■□□□□ 0.1
FDPS-215ENST00000490140 A1BGP04217 495 aa15.69■□□□□ 0.1
FDPS-215ENST00000490140 U2AF1L5P0DN76 240 aaPredicted RBP15.69■□□□□ 0.1
FDPS-215ENST00000490140 HTRA3P83110 453 aa15.69■□□□□ 0.1
FDPS-215ENST00000490140 U2AF1Q01081 240 aaKnown RBP eCLIP15.69■□□□□ 0.1
FDPS-215ENST00000490140 PRPF40BQ6NWY9 871 aaKnown RBP15.69■□□□□ 0.1
FDPS-215ENST00000490140 CACNA1SQ13698 1873 aa15.68■□□□□ 0.1
FDPS-215ENST00000490140 SRGNP10124 158 aa15.68■□□□□ 0.1
FDPS-215ENST00000490140 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
FDPS-215ENST00000490140 NPR1P16066 1061 aa15.67■□□□□ 0.1
FDPS-215ENST00000490140 PRELPP51888 382 aa15.67■□□□□ 0.1
FDPS-215ENST00000490140 CCDC93Q567U6 631 aa15.67■□□□□ 0.1
FDPS-215ENST00000490140 TPTE2Q6XPS3 522 aa15.67■□□□□ 0.1
FDPS-215ENST00000490140 PHACTR3Q96KR7 559 aa15.67■□□□□ 0.1
FDPS-215ENST00000490140 LAMB4A4D0S4 1761 aa15.65■□□□□ 0.1
FDPS-215ENST00000490140 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
FDPS-215ENST00000490140 CCDC24Q8N4L8 307 aa15.65■□□□□ 0.1
FDPS-215ENST00000490140 USP16Q9Y5T5 823 aa15.65■□□□□ 0.1
FDPS-215ENST00000490140 SLX4Q8IY92 1834 aa15.65■□□□□ 0.1
FDPS-215ENST00000490140 SCN4AP35499 1836 aa15.64■□□□□ 0.09
FDPS-215ENST00000490140 GTF2E1P29083 439 aaPredicted RBP15.64■□□□□ 0.09
FDPS-215ENST00000490140 MCM10Q7L590 875 aa15.64■□□□□ 0.09
FDPS-215ENST00000490140 PNISRQ8TF01 805 aaKnown RBP15.64■□□□□ 0.09
FDPS-215ENST00000490140 NIP7Q9Y221 180 aaKnown RBP eCLIP15.64■□□□□ 0.09
FDPS-215ENST00000490140 KCNQ3O43525 872 aa15.63■□□□□ 0.09
FDPS-215ENST00000490140 PPP2R1AP30153 589 aa15.63■□□□□ 0.09
FDPS-215ENST00000490140 ALDH1B1P30837 517 aa15.63■□□□□ 0.09
FDPS-215ENST00000490140 RTKN2Q8IZC4 609 aa15.63■□□□□ 0.09
FDPS-215ENST00000490140 TNS4Q8IZW8 715 aa15.63■□□□□ 0.09
FDPS-215ENST00000490140 NYXQ9GZU5 481 aa15.63■□□□□ 0.09
FDPS-215ENST00000490140 CREBZFQ9NS37 354 aa15.63■□□□□ 0.09
FDPS-215ENST00000490140 TAF7Q15545 349 aaPredicted RBP15.62■□□□□ 0.09
FDPS-215ENST00000490140 LDHDQ86WU2 507 aa15.62■□□□□ 0.09
FDPS-215ENST00000490140 L3MBTL3Q96JM7 780 aaPredicted RBP15.62■□□□□ 0.09
FDPS-215ENST00000490140 KLRG2A4D1S0 409 aaPredicted RBP15.61■□□□□ 0.09
FDPS-215ENST00000490140 POTECB2RU33 542 aa15.61■□□□□ 0.09
FDPS-215ENST00000490140 FKBP4Q02790 459 aaKnown RBP eCLIP15.61■□□□□ 0.09
FDPS-215ENST00000490140 PNNQ9H307 717 aaKnown RBP15.61■□□□□ 0.09
FDPS-215ENST00000490140 DDNO94850 711 aaPredicted RBP15.6■□□□□ 0.09
FDPS-215ENST00000490140 HSPA1AP0DMV8 641 aaKnown RBP15.6■□□□□ 0.09
FDPS-215ENST00000490140 HSPA1BP0DMV9 641 aaKnown RBP15.6■□□□□ 0.09
FDPS-215ENST00000490140 PIP4K2AP48426 406 aaPredicted RBP15.6■□□□□ 0.09
FDPS-215ENST00000490140 GRIPAP1Q4V328 841 aa15.6■□□□□ 0.09
FDPS-215ENST00000490140 COL13A1Q5TAT6 717 aaPredicted RBP15.6■□□□□ 0.09
FDPS-215ENST00000490140 KIF6Q6ZMV9 814 aa15.6■□□□□ 0.09
FDPS-215ENST00000490140 CC2D2BQ6DHV5 1058 aa15.59■□□□□ 0.09
FDPS-215ENST00000490140 IBTKQ9P2D0 1353 aaPredicted RBP15.59■□□□□ 0.09
FDPS-215ENST00000490140 PRAMEF22A3QJZ6 481 aa15.58■□□□□ 0.08
FDPS-215ENST00000490140 ERVV-1B6SEH8 477 aa15.58■□□□□ 0.08
FDPS-215ENST00000490140 PNMA8AQ86V59 439 aaPredicted RBP15.58■□□□□ 0.08
FDPS-215ENST00000490140 C7orf43Q8WVR3 580 aa15.58■□□□□ 0.08
FDPS-215ENST00000490140 JDP2Q8WYK2 163 aa15.58■□□□□ 0.08
FDPS-215ENST00000490140 HACL1Q9UJ83 578 aa15.58■□□□□ 0.08
FDPS-215ENST00000490140 RIC1Q4ADV7 1423 aa15.58■□□□□ 0.08
FDPS-215ENST00000490140 NBPF26B4DH59 902 aa15.57■□□□□ 0.08
FDPS-215ENST00000490140 DCTN1Q14203 1278 aa15.57■□□□□ 0.08
FDPS-215ENST00000490140 NBPF10Q6P3W6 841 aaKnown RBP15.57■□□□□ 0.08
FDPS-215ENST00000490140 NBPF15Q8N660 670 aa15.57■□□□□ 0.08
FDPS-215ENST00000490140 RPGRQ92834 1020 aaKnown RBP15.57■□□□□ 0.08
FDPS-215ENST00000490140 TAF1DQ9H5J8 278 aaPredicted RBP15.57■□□□□ 0.08
FDPS-215ENST00000490140 MAPK8IP3Q9UPT6 1336 aa15.57■□□□□ 0.08
FDPS-215ENST00000490140 KDM3BQ7LBC6 1761 aa15.57■□□□□ 0.08
FDPS-215ENST00000490140 FAM177BA6PVY3 158 aa15.56■□□□□ 0.08
FDPS-215ENST00000490140 IARSP41252 1262 aaKnown RBP15.56■□□□□ 0.08
FDPS-215ENST00000490140 PSMD1Q99460 953 aa15.56■□□□□ 0.08
FDPS-215ENST00000490140 TMX4Q9H1E5 349 aaPredicted RBP15.56■□□□□ 0.08
FDPS-215ENST00000490140 ZNF277Q9NRM2 450 aaPredicted RBP15.56■□□□□ 0.08
FDPS-215ENST00000490140 DLG5Q8TDM6 1919 aa15.55■□□□□ 0.08
FDPS-215ENST00000490140 CNTNAP1P78357 1384 aa15.55■□□□□ 0.08
FDPS-215ENST00000490140 ERBB4Q15303 1308 aa15.55■□□□□ 0.08
FDPS-215ENST00000490140 MAP3K15Q6ZN16 1313 aa15.55■□□□□ 0.08
FDPS-215ENST00000490140 CRY2Q49AN0 593 aa15.55■□□□□ 0.08
FDPS-215ENST00000490140 EAPPQ56P03 285 aaPredicted RBP15.55■□□□□ 0.08
FDPS-215ENST00000490140 GPC2Q8N158 579 aa15.55■□□□□ 0.08
FDPS-215ENST00000490140 AIDAQ96BJ3 306 aa15.55■□□□□ 0.08
FDPS-215ENST00000490140 TMEM88BA6NKF7 163 aa15.54■□□□□ 0.08
FDPS-215ENST00000490140 EPHX2P34913 555 aa15.54■□□□□ 0.08
FDPS-215ENST00000490140 MKRN1Q9UHC7 482 aaKnown RBP15.54■□□□□ 0.08
FDPS-215ENST00000490140 NUP98P52948 1817 aa15.54■□□□□ 0.08
FDPS-215ENST00000490140 PASKQ96RG2 1323 aa15.53■□□□□ 0.08
FDPS-215ENST00000490140 ZNF541Q9H0D2 1346 aa15.53■□□□□ 0.08
FDPS-215ENST00000490140 POTEIP0CG38 1075 aa15.53■□□□□ 0.08
FDPS-215ENST00000490140 POTEJP0CG39 1038 aa15.53■□□□□ 0.08
FDPS-215ENST00000490140 LMOD1P29536 600 aaPredicted RBP15.53■□□□□ 0.08
FDPS-215ENST00000490140 EIF6P56537 245 aaKnown RBP15.53■□□□□ 0.08
FDPS-215ENST00000490140 NFE2L2Q16236 605 aa15.53■□□□□ 0.08
FDPS-215ENST00000490140 HLFQ16534 295 aa15.53■□□□□ 0.08
FDPS-215ENST00000490140 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
FDPS-215ENST00000490140 FZD9O00144 591 aa15.52■□□□□ 0.08
FDPS-215ENST00000490140 CAPN15O75808 1086 aa15.52■□□□□ 0.08
FDPS-215ENST00000490140 PARP10Q53GL7 1025 aa15.52■□□□□ 0.08
FDPS-215ENST00000490140 PPP1R42Q7Z4L9 355 aa15.52■□□□□ 0.08
FDPS-215ENST00000490140 SYNE4Q8N205 404 aa15.52■□□□□ 0.08
FDPS-215ENST00000490140 NGEFQ8N5V2 710 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms