RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 POTEIP0CG38 1075 aa10.97□□□□□ -0.65
SMG5-205ENST00000489907 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
SMG5-205ENST00000489907 PIP4K2AP48426 406 aaPredicted RBP10.97□□□□□ -0.65
SMG5-205ENST00000489907 STYK1Q6J9G0 422 aa10.97□□□□□ -0.65
SMG5-205ENST00000489907 NBPF10Q6P3W6 841 aaKnown RBP10.97□□□□□ -0.65
SMG5-205ENST00000489907 NBPF15Q8N660 670 aa10.97□□□□□ -0.65
SMG5-205ENST00000489907 ZNF622Q969S3 477 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMG5-205ENST00000489907 DLG5Q8TDM6 1919 aa10.96□□□□□ -0.65
SMG5-205ENST00000489907 SCN4AP35499 1836 aa10.96□□□□□ -0.65
SMG5-205ENST00000489907 DDNO94850 711 aaPredicted RBP10.96□□□□□ -0.65
SMG5-205ENST00000489907 PRKAR2BP31323 418 aa10.96□□□□□ -0.65
SMG5-205ENST00000489907 ERFEQ4G0M1 354 aa10.96□□□□□ -0.65
SMG5-205ENST00000489907 CLEC4GQ6UXB4 293 aa10.96□□□□□ -0.65
SMG5-205ENST00000489907 DZIP3Q86Y13 1208 aaKnown RBP10.96□□□□□ -0.65
SMG5-205ENST00000489907 SETDB2Q96T68 719 aa10.96□□□□□ -0.65
SMG5-205ENST00000489907 ZNF219Q9P2Y4 722 aaPredicted RBP10.96□□□□□ -0.65
SMG5-205ENST00000489907 SNED1Q8TER0 1413 aa10.95□□□□□ -0.66
SMG5-205ENST00000489907 NPM3O75607 178 aaKnown RBP10.95□□□□□ -0.66
SMG5-205ENST00000489907 DPY19L2Q6NUT2 758 aa10.95□□□□□ -0.66
SMG5-205ENST00000489907 PRPF40BQ6NWY9 871 aaKnown RBP10.95□□□□□ -0.66
SMG5-205ENST00000489907 MASTLQ96GX5 879 aa10.95□□□□□ -0.66
SMG5-205ENST00000489907 ADAMTSL1Q8N6G6 1762 aa10.95□□□□□ -0.66
SMG5-205ENST00000489907 NUP98P52948 1817 aa10.94□□□□□ -0.66
SMG5-205ENST00000489907 CNGB1Q14028 1251 aaPredicted RBP10.94□□□□□ -0.66
SMG5-205ENST00000489907 MCM10Q7L590 875 aa10.94□□□□□ -0.66
SMG5-205ENST00000489907 CNBD1Q8NA66 436 aa10.94□□□□□ -0.66
SMG5-205ENST00000489907 CNKSR1Q969H4 720 aa10.94□□□□□ -0.66
SMG5-205ENST00000489907 ZNF330Q9Y3S2 320 aaPredicted RBP10.94□□□□□ -0.66
SMG5-205ENST00000489907 KDM3BQ7LBC6 1761 aa10.93□□□□□ -0.66
SMG5-205ENST00000489907 RGL2O15211 777 aa10.93□□□□□ -0.66
SMG5-205ENST00000489907 SNRPA1P09661 255 aaKnown RBP10.93□□□□□ -0.66
SMG5-205ENST00000489907 HSPA1AP0DMV8 641 aaKnown RBP10.93□□□□□ -0.66
SMG5-205ENST00000489907 HSPA1BP0DMV9 641 aaKnown RBP10.93□□□□□ -0.66
SMG5-205ENST00000489907 PPP2R1AP30153 589 aa10.93□□□□□ -0.66
SMG5-205ENST00000489907 DCTN1Q14203 1278 aa10.93□□□□□ -0.66
SMG5-205ENST00000489907 OLFM4Q6UX06 510 aa10.93□□□□□ -0.66
SMG5-205ENST00000489907 TAOK3Q9H2K8 898 aa10.93□□□□□ -0.66
SMG5-205ENST00000489907 LAMB4A4D0S4 1761 aa10.93□□□□□ -0.66
SMG5-205ENST00000489907 PASKQ96RG2 1323 aa10.92□□□□□ -0.66
SMG5-205ENST00000489907 ITGBL1O95965 494 aaPredicted RBP10.92□□□□□ -0.66
SMG5-205ENST00000489907 HLFQ16534 295 aa10.92□□□□□ -0.66
SMG5-205ENST00000489907 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
SMG5-205ENST00000489907 L3MBTL3Q96JM7 780 aaPredicted RBP10.92□□□□□ -0.66
SMG5-205ENST00000489907 HTATSF1O43719 755 aaKnown RBP10.91□□□□□ -0.66
SMG5-205ENST00000489907 NPR1P16066 1061 aa10.91□□□□□ -0.66
SMG5-205ENST00000489907 ST5P78524 1137 aa10.91□□□□□ -0.66
SMG5-205ENST00000489907 TAF1DQ9H5J8 278 aaPredicted RBP10.91□□□□□ -0.66
SMG5-205ENST00000489907 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
SMG5-205ENST00000489907 COL4A5P29400 1685 aa10.91□□□□□ -0.66
SMG5-205ENST00000489907 FKBP4Q02790 459 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMG5-205ENST00000489907 TAF7Q15545 349 aaPredicted RBP10.9□□□□□ -0.66
SMG5-205ENST00000489907 SOGA3Q5TF21 947 aa10.9□□□□□ -0.66
SMG5-205ENST00000489907 NBPF5PQ86XG9 351 aaPredicted RBP10.9□□□□□ -0.66
SMG5-205ENST00000489907 MIS18AQ9NYP9 233 aa10.9□□□□□ -0.66
SMG5-205ENST00000489907 NIP7Q9Y221 180 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMG5-205ENST00000489907 LTBP1Q14766 1721 aa10.89□□□□□ -0.67
SMG5-205ENST00000489907 ZNF541Q9H0D2 1346 aa10.89□□□□□ -0.67
SMG5-205ENST00000489907 FZD9O00144 591 aa10.89□□□□□ -0.67
SMG5-205ENST00000489907 U2AF1L5P0DN76 240 aaPredicted RBP10.89□□□□□ -0.67
SMG5-205ENST00000489907 U2AF1Q01081 240 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMG5-205ENST00000489907 CRY2Q49AN0 593 aa10.89□□□□□ -0.67
SMG5-205ENST00000489907 CCDC93Q567U6 631 aa10.89□□□□□ -0.67
SMG5-205ENST00000489907 TPTE2Q6XPS3 522 aa10.89□□□□□ -0.67
SMG5-205ENST00000489907 TNS4Q8IZW8 715 aa10.89□□□□□ -0.67
SMG5-205ENST00000489907 CFAP53Q96M91 514 aa10.89□□□□□ -0.67
SMG5-205ENST00000489907 PLEKHF1Q96S99 279 aa10.89□□□□□ -0.67
SMG5-205ENST00000489907 ZNF277Q9NRM2 450 aaPredicted RBP10.88□□□□□ -0.67
SMG5-205ENST00000489907 MKRN1Q9UHC7 482 aaKnown RBP10.88□□□□□ -0.67
SMG5-205ENST00000489907 NUDCQ9Y266 331 aa10.88□□□□□ -0.67
SMG5-205ENST00000489907 ZNF652Q9Y2D9 606 aa10.88□□□□□ -0.67
SMG5-205ENST00000489907 CNTNAP1P78357 1384 aa10.88□□□□□ -0.67
SMG5-205ENST00000489907 NPM2Q86SE8 214 aaKnown RBP10.87□□□□□ -0.67
SMG5-205ENST00000489907 SLC51AQ86UW1 340 aa10.87□□□□□ -0.67
SMG5-205ENST00000489907 LDHDQ86WU2 507 aa10.87□□□□□ -0.67
SMG5-205ENST00000489907 SYNE4Q8N205 404 aa10.87□□□□□ -0.67
SMG5-205ENST00000489907 RTF1Q92541 710 aaKnown RBP10.87□□□□□ -0.67
SMG5-205ENST00000489907 ABCC12Q96J65 1359 aa10.87□□□□□ -0.67
SMG5-205ENST00000489907 IQCA1LA6NCM1 817 aa10.86□□□□□ -0.67
SMG5-205ENST00000489907 FAM177BA6PVY3 158 aa10.86□□□□□ -0.67
SMG5-205ENST00000489907 ERVV-1B6SEH8 477 aa10.86□□□□□ -0.67
SMG5-205ENST00000489907 ALDH1B1P30837 517 aa10.86□□□□□ -0.67
SMG5-205ENST00000489907 HOXA10P31260 410 aaPredicted RBP10.86□□□□□ -0.67
SMG5-205ENST00000489907 IARSP41252 1262 aaKnown RBP10.86□□□□□ -0.67
SMG5-205ENST00000489907 EIF4A1P60842 406 aaKnown RBP10.86□□□□□ -0.67
SMG5-205ENST00000489907 TTLL7Q6ZT98 887 aa10.86□□□□□ -0.67
SMG5-205ENST00000489907 LRP10Q7Z4F1 713 aa10.86□□□□□ -0.67
SMG5-205ENST00000489907 RTKN2Q8IZC4 609 aa10.86□□□□□ -0.67
SMG5-205ENST00000489907 UBN2Q6ZU65 1347 aa10.85□□□□□ -0.67
SMG5-205ENST00000489907 RIC1Q4ADV7 1423 aa10.85□□□□□ -0.67
SMG5-205ENST00000489907 NPHP1O15259 732 aa10.85□□□□□ -0.67
SMG5-205ENST00000489907 FOXN1O15353 648 aa10.85□□□□□ -0.67
SMG5-205ENST00000489907 CAPN15O75808 1086 aa10.85□□□□□ -0.67
SMG5-205ENST00000489907 EPHX2P34913 555 aa10.85□□□□□ -0.67
SMG5-205ENST00000489907 VEGFBP49765 207 aa10.85□□□□□ -0.67
SMG5-205ENST00000489907 NUTM1Q86Y26 1132 aa10.85□□□□□ -0.67
SMG5-205ENST00000489907 ZNF34Q8IZ26 560 aa10.85□□□□□ -0.67
SMG5-205ENST00000489907 PSMD1Q99460 953 aa10.85□□□□□ -0.67
SMG5-205ENST00000489907 MAP3K15Q6ZN16 1313 aa10.84□□□□□ -0.67
SMG5-205ENST00000489907 TMEM88BA6NKF7 163 aa10.84□□□□□ -0.67
SMG5-205ENST00000489907 SUSD4Q5VX71 490 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms