RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 TBC1D9BQ66K14 1250 aa12.62□□□□□ -0.39
CCT3-213ENST00000489870 PLEKHF1Q96S99 279 aa12.62□□□□□ -0.39
CCT3-213ENST00000489870 TBC1D2BQ9UPU7 963 aa12.62□□□□□ -0.39
CCT3-213ENST00000489870 NFE2L2Q16236 605 aa12.61□□□□□ -0.39
CCT3-213ENST00000489870 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
CCT3-213ENST00000489870 PRR5LQ6MZQ0 368 aa12.61□□□□□ -0.39
CCT3-213ENST00000489870 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
CCT3-213ENST00000489870 C16orf71Q8IYS4 520 aaPredicted RBP12.61□□□□□ -0.39
CCT3-213ENST00000489870 CNBD1Q8NA66 436 aa12.61□□□□□ -0.39
CCT3-213ENST00000489870 RNF181Q9P0P0 153 aa12.61□□□□□ -0.39
CCT3-213ENST00000489870 ERBB4Q15303 1308 aa12.61□□□□□ -0.39
CCT3-213ENST00000489870 GLTPD2A6NH11 291 aa12.6□□□□□ -0.39
CCT3-213ENST00000489870 VEGFAP15692 232 aaPredicted RBP12.6□□□□□ -0.39
CCT3-213ENST00000489870 MCM10Q7L590 875 aa12.6□□□□□ -0.39
CCT3-213ENST00000489870 ZNF526Q8TF50 670 aaPredicted RBP12.6□□□□□ -0.39
CCT3-213ENST00000489870 MASTLQ96GX5 879 aa12.6□□□□□ -0.39
CCT3-213ENST00000489870 WWC3Q9ULE0 1092 aa12.6□□□□□ -0.39
CCT3-213ENST00000489870 KCNQ3O43525 872 aa12.59□□□□□ -0.39
CCT3-213ENST00000489870 SRGNP10124 158 aa12.59□□□□□ -0.39
CCT3-213ENST00000489870 LMOD3Q0VAK6 560 aa12.59□□□□□ -0.39
CCT3-213ENST00000489870 CNGB1Q14028 1251 aaPredicted RBP12.59□□□□□ -0.39
CCT3-213ENST00000489870 SCN7AQ01118 1682 aa12.58□□□□□ -0.4
CCT3-213ENST00000489870 NPHP1O15259 732 aa12.58□□□□□ -0.4
CCT3-213ENST00000489870 ALDH1B1P30837 517 aa12.58□□□□□ -0.4
CCT3-213ENST00000489870 BICDL1Q6ZP65 573 aa12.58□□□□□ -0.4
CCT3-213ENST00000489870 NBPF5PQ86XG9 351 aaPredicted RBP12.58□□□□□ -0.4
CCT3-213ENST00000489870 NYXQ9GZU5 481 aa12.58□□□□□ -0.4
CCT3-213ENST00000489870 MAPK8IP3Q9UPT6 1336 aa12.58□□□□□ -0.4
CCT3-213ENST00000489870 NPR1P16066 1061 aa12.57□□□□□ -0.4
CCT3-213ENST00000489870 EIF4A1P60842 406 aaKnown RBP12.57□□□□□ -0.4
CCT3-213ENST00000489870 CC2D2BQ6DHV5 1058 aa12.57□□□□□ -0.4
CCT3-213ENST00000489870 ZNF622Q969S3 477 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCT3-213ENST00000489870 NMRK2Q9NPI5 230 aa12.57□□□□□ -0.4
CCT3-213ENST00000489870 ZNF330Q9Y3S2 320 aaPredicted RBP12.57□□□□□ -0.4
CCT3-213ENST00000489870 DICER1Q9UPY3 1922 aaKnown RBP12.56□□□□□ -0.4
CCT3-213ENST00000489870 NBPF26B4DH59 902 aa12.56□□□□□ -0.4
CCT3-213ENST00000489870 NBPF10Q6P3W6 841 aaKnown RBP12.56□□□□□ -0.4
CCT3-213ENST00000489870 RTKN2Q8IZC4 609 aa12.56□□□□□ -0.4
CCT3-213ENST00000489870 NBPF15Q8N660 670 aa12.56□□□□□ -0.4
CCT3-213ENST00000489870 SMC1BQ8NDV3 1235 aa12.56□□□□□ -0.4
CCT3-213ENST00000489870 TNRC6CQ9HCJ0 1690 aaKnown RBP12.56□□□□□ -0.4
CCT3-213ENST00000489870 FER1L6Q2WGJ9 1857 aa12.55□□□□□ -0.4
CCT3-213ENST00000489870 DLG5Q8TDM6 1919 aa12.55□□□□□ -0.4
CCT3-213ENST00000489870 NFKBIEO00221 500 aa12.55□□□□□ -0.4
CCT3-213ENST00000489870 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
CCT3-213ENST00000489870 DNAJC5GQ8N7S2 189 aa12.55□□□□□ -0.4
CCT3-213ENST00000489870 C7orf43Q8WVR3 580 aa12.55□□□□□ -0.4
CCT3-213ENST00000489870 RRAGCQ9HB90 399 aa12.55□□□□□ -0.4
CCT3-213ENST00000489870 NIP7Q9Y221 180 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCT3-213ENST00000489870 BCORQ6W2J9 1755 aa12.55□□□□□ -0.4
CCT3-213ENST00000489870 CCDC88AQ3V6T2 1871 aa12.55□□□□□ -0.4
CCT3-213ENST00000489870 ANKRD31Q8N7Z5 1873 aa12.55□□□□□ -0.4
CCT3-213ENST00000489870 IBTKQ9P2D0 1353 aaPredicted RBP12.55□□□□□ -0.4
CCT3-213ENST00000489870 CHMP4AQ9BY43 222 aa12.54□□□□□ -0.4
CCT3-213ENST00000489870 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
CCT3-213ENST00000489870 RNF123Q5XPI4 1314 aa12.54□□□□□ -0.4
CCT3-213ENST00000489870 RIC1Q4ADV7 1423 aa12.54□□□□□ -0.4
CCT3-213ENST00000489870 C21orf2O43822 256 aa12.53□□□□□ -0.4
CCT3-213ENST00000489870 GTF2E1P29083 439 aaPredicted RBP12.53□□□□□ -0.4
CCT3-213ENST00000489870 CRY2Q49AN0 593 aa12.53□□□□□ -0.4
CCT3-213ENST00000489870 ERFEQ4G0M1 354 aa12.53□□□□□ -0.4
CCT3-213ENST00000489870 PARP10Q53GL7 1025 aa12.53□□□□□ -0.4
CCT3-213ENST00000489870 PRPF40BQ6NWY9 871 aaKnown RBP12.53□□□□□ -0.4
CCT3-213ENST00000489870 KIF6Q6ZMV9 814 aa12.53□□□□□ -0.4
CCT3-213ENST00000489870 VPS33BQ9H267 617 aa12.53□□□□□ -0.4
CCT3-213ENST00000489870 ZNF219Q9P2Y4 722 aaPredicted RBP12.53□□□□□ -0.4
CCT3-213ENST00000489870 MAP3K15Q6ZN16 1313 aa12.53□□□□□ -0.4
CCT3-213ENST00000489870 MYBBP1AQ9BQG0 1328 aaKnown RBP12.53□□□□□ -0.4
CCT3-213ENST00000489870 KDM3BQ7LBC6 1761 aa12.52□□□□□ -0.41
CCT3-213ENST00000489870 ARFGEF2Q9Y6D5 1785 aa12.52□□□□□ -0.41
CCT3-213ENST00000489870 PRAMEF22A3QJZ6 481 aa12.52□□□□□ -0.41
CCT3-213ENST00000489870 HOXA10P31260 410 aaPredicted RBP12.52□□□□□ -0.41
CCT3-213ENST00000489870 RIPK4P57078 832 aa12.52□□□□□ -0.41
CCT3-213ENST00000489870 CCDC93Q567U6 631 aa12.52□□□□□ -0.41
CCT3-213ENST00000489870 GIGYF2Q6Y7W6 1299 aaKnown RBP12.52□□□□□ -0.41
CCT3-213ENST00000489870 IQCA1LA6NCM1 817 aa12.51□□□□□ -0.41
CCT3-213ENST00000489870 HOXB7P09629 217 aa12.51□□□□□ -0.41
CCT3-213ENST00000489870 TMPOP42166 694 aaKnown RBP12.51□□□□□ -0.41
CCT3-213ENST00000489870 HSP90AB3PQ58FF7 597 aa12.51□□□□□ -0.41
CCT3-213ENST00000489870 PPP1R42Q7Z4L9 355 aa12.51□□□□□ -0.41
CCT3-213ENST00000489870 MIS18AQ9NYP9 233 aa12.51□□□□□ -0.41
CCT3-213ENST00000489870 LAMB4A4D0S4 1761 aa12.51□□□□□ -0.41
CCT3-213ENST00000489870 NUP98P52948 1817 aa12.51□□□□□ -0.41
CCT3-213ENST00000489870 SLX4Q8IY92 1834 aa12.51□□□□□ -0.41
CCT3-213ENST00000489870 ATXN8OSP0DMR3 200 aa12.5□□□□□ -0.41
CCT3-213ENST00000489870 FKBP4Q02790 459 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCT3-213ENST00000489870 RASSF7Q02833 373 aa12.5□□□□□ -0.41
CCT3-213ENST00000489870 SLC10A5Q5PT55 438 aa12.5□□□□□ -0.41
CCT3-213ENST00000489870 ZNF34Q8IZ26 560 aa12.5□□□□□ -0.41
CCT3-213ENST00000489870 JMYQ8N9B5 988 aa12.5□□□□□ -0.41
CCT3-213ENST00000489870 RUNDC1Q96C34 613 aa12.5□□□□□ -0.41
CCT3-213ENST00000489870 L3MBTL3Q96JM7 780 aaPredicted RBP12.5□□□□□ -0.41
CCT3-213ENST00000489870 CRAMP1Q96RY5 1269 aa12.5□□□□□ -0.41
CCT3-213ENST00000489870 PSMD1Q99460 953 aa12.5□□□□□ -0.41
CCT3-213ENST00000489870 TSPYL4Q9UJ04 414 aa12.5□□□□□ -0.41
CCT3-213ENST00000489870 WDR90Q96KV7 1748 aa12.5□□□□□ -0.41
CCT3-213ENST00000489870 CHL1O00533 1208 aa12.49□□□□□ -0.41
CCT3-213ENST00000489870 PRELPP51888 382 aa12.49□□□□□ -0.41
CCT3-213ENST00000489870 HLFQ16534 295 aa12.49□□□□□ -0.41
CCT3-213ENST00000489870 RRP7AQ9Y3A4 280 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms