RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 SEC24BO95487 1268 aa12.92□□□□□ -0.34
ABCD4-214ENST00000489678 UBE3BQ7Z3V4 1068 aa12.92□□□□□ -0.34
ABCD4-214ENST00000489678 ATRNO75882 1429 aa12.92□□□□□ -0.34
ABCD4-214ENST00000489678 CYP19A1P11511 503 aaPredicted RBP12.91□□□□□ -0.34
ABCD4-214ENST00000489678 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
ABCD4-214ENST00000489678 SMARCA5O60264 1052 aaPredicted RBP12.91□□□□□ -0.34
ABCD4-214ENST00000489678 ANKRD13DQ6ZTN6 518 aa12.91□□□□□ -0.34
ABCD4-214ENST00000489678 TFCP2L1Q9NZI6 479 aa12.91□□□□□ -0.34
ABCD4-214ENST00000489678 LRRFIP2Q9Y608 721 aaKnown RBP12.91□□□□□ -0.34
ABCD4-214ENST00000489678 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
ABCD4-214ENST00000489678 STARD3NLO95772 234 aa12.9□□□□□ -0.34
ABCD4-214ENST00000489678 TXNRD1Q16881 649 aa12.9□□□□□ -0.34
ABCD4-214ENST00000489678 DDRGK1Q96HY6 314 aa12.9□□□□□ -0.34
ABCD4-214ENST00000489678 RWDD1Q9H446 243 aaPredicted RBP12.9□□□□□ -0.34
ABCD4-214ENST00000489678 C9orf78Q9NZ63 289 aaPredicted RBP12.9□□□□□ -0.34
ABCD4-214ENST00000489678 PA2G4Q9UQ80 394 aaKnown RBP12.9□□□□□ -0.34
ABCD4-214ENST00000489678 NRAPQ86VF7 1730 aa12.9□□□□□ -0.34
ABCD4-214ENST00000489678 HCLS1P14317 486 aaPredicted RBP12.9□□□□□ -0.34
ABCD4-214ENST00000489678 DZIP3Q86Y13 1208 aaKnown RBP12.9□□□□□ -0.34
ABCD4-214ENST00000489678 TOGARAM1Q9Y4F4 1720 aa12.9□□□□□ -0.34
ABCD4-214ENST00000489678 USPL1Q5W0Q7 1092 aa12.89□□□□□ -0.35
ABCD4-214ENST00000489678 DNAAF4Q8WXU2 420 aa12.89□□□□□ -0.35
ABCD4-214ENST00000489678 CDCA7Q9BWT1 371 aaPredicted RBP12.89□□□□□ -0.35
ABCD4-214ENST00000489678 DDX21Q9NR30 783 aaKnown RBP eCLIP12.89□□□□□ -0.35
ABCD4-214ENST00000489678 EXOC6BQ9Y2D4 811 aa12.89□□□□□ -0.35
ABCD4-214ENST00000489678 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.88□□□□□ -0.35
ABCD4-214ENST00000489678 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
ABCD4-214ENST00000489678 ZNF827Q17R98 1081 aa12.88□□□□□ -0.35
ABCD4-214ENST00000489678 ALDH1L2Q3SY69 923 aa12.88□□□□□ -0.35
ABCD4-214ENST00000489678 INTS5Q6P9B9 1019 aaKnown RBP12.88□□□□□ -0.35
ABCD4-214ENST00000489678 ZNF219Q9P2Y4 722 aaPredicted RBP12.88□□□□□ -0.35
ABCD4-214ENST00000489678 IPO8O15397 1037 aaKnown RBP12.88□□□□□ -0.35
ABCD4-214ENST00000489678 DDX19BQ9UMR2 479 aa12.88□□□□□ -0.35
ABCD4-214ENST00000489678 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
ABCD4-214ENST00000489678 SNAP23O00161 211 aa12.88□□□□□ -0.35
ABCD4-214ENST00000489678 AK7Q96M32 723 aa12.88□□□□□ -0.35
ABCD4-214ENST00000489678 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
ABCD4-214ENST00000489678 LRRC37A3O60309 1634 aa12.87□□□□□ -0.35
ABCD4-214ENST00000489678 ADCY9O60503 1353 aa12.87□□□□□ -0.35
ABCD4-214ENST00000489678 A0A087WZG4 1122 aa12.87□□□□□ -0.35
ABCD4-214ENST00000489678 PNMA6EA0A0J9YXQ4 647 aa12.87□□□□□ -0.35
ABCD4-214ENST00000489678 EPHA10Q5JZY3 1008 aa12.87□□□□□ -0.35
ABCD4-214ENST00000489678 ZNF594Q96JF6 807 aaPredicted RBP12.87□□□□□ -0.35
ABCD4-214ENST00000489678 ZBTB40Q9NUA8 1239 aa12.87□□□□□ -0.35
ABCD4-214ENST00000489678 SHANK3Q9BYB0 1731 aa12.87□□□□□ -0.35
ABCD4-214ENST00000489678 CCDC87Q9NVE4 849 aa12.86□□□□□ -0.35
ABCD4-214ENST00000489678 HDAC1Q13547 482 aaPredicted RBP12.86□□□□□ -0.35
ABCD4-214ENST00000489678 C16orf71Q8IYS4 520 aaPredicted RBP12.86□□□□□ -0.35
ABCD4-214ENST00000489678 LNPKQ9C0E8 428 aa12.86□□□□□ -0.35
ABCD4-214ENST00000489678 SRCIN1Q9C0H9 1055 aa12.86□□□□□ -0.35
ABCD4-214ENST00000489678 IL1RAPL2Q9NP60 686 aa12.86□□□□□ -0.35
ABCD4-214ENST00000489678 BRWD3Q6RI45 1802 aa12.86□□□□□ -0.35
ABCD4-214ENST00000489678 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
ABCD4-214ENST00000489678 GTF2E1P29083 439 aaPredicted RBP12.86□□□□□ -0.35
ABCD4-214ENST00000489678 BRPF1P55201 1214 aaPredicted RBP12.86□□□□□ -0.35
ABCD4-214ENST00000489678 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
ABCD4-214ENST00000489678 USP44Q9H0E7 712 aa12.86□□□□□ -0.35
ABCD4-214ENST00000489678 PODXL2Q9NZ53 605 aa12.86□□□□□ -0.35
ABCD4-214ENST00000489678 SIRT2Q8IXJ6 389 aa12.85□□□□□ -0.35
ABCD4-214ENST00000489678 NIP7Q9Y221 180 aaKnown RBP eCLIP12.85□□□□□ -0.35
ABCD4-214ENST00000489678 WTIPA6NIX2 430 aaPredicted RBP12.85□□□□□ -0.35
ABCD4-214ENST00000489678 ZBTB7BO15156 539 aaPredicted RBP12.85□□□□□ -0.35
ABCD4-214ENST00000489678 ZBTB7AO95365 584 aa12.85□□□□□ -0.35
ABCD4-214ENST00000489678 OTUD7AQ8TE49 926 aaPredicted RBP12.84□□□□□ -0.35
ABCD4-214ENST00000489678 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
ABCD4-214ENST00000489678 KSR2Q6VAB6 950 aa12.84□□□□□ -0.35
ABCD4-214ENST00000489678 LRP10Q7Z4F1 713 aa12.84□□□□□ -0.35
ABCD4-214ENST00000489678 API5Q9BZZ5 524 aaKnown RBP12.84□□□□□ -0.35
ABCD4-214ENST00000489678 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
ABCD4-214ENST00000489678 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.84□□□□□ -0.35
ABCD4-214ENST00000489678 PARP4Q9UKK3 1724 aaKnown RBP12.84□□□□□ -0.35
ABCD4-214ENST00000489678 UBTFL1P0CB47 393 aaPredicted RBP12.83□□□□□ -0.35
ABCD4-214ENST00000489678 RFC4P35249 363 aa12.83□□□□□ -0.35
ABCD4-214ENST00000489678 BEND3Q5T5X7 828 aa12.83□□□□□ -0.35
ABCD4-214ENST00000489678 KIF6Q6ZMV9 814 aa12.83□□□□□ -0.35
ABCD4-214ENST00000489678 SUCLG2Q96I99 432 aa12.83□□□□□ -0.35
ABCD4-214ENST00000489678 HYPKQ9NX55 129 aa12.83□□□□□ -0.35
ABCD4-214ENST00000489678 TRMT112Q9UI30 125 aaKnown RBP12.83□□□□□ -0.36
ABCD4-214ENST00000489678 NDUFB9Q9Y6M9 179 aa12.83□□□□□ -0.36
ABCD4-214ENST00000489678 SCN11AQ9UI33 1791 aa12.83□□□□□ -0.36
ABCD4-214ENST00000489678 TBC1D9BQ66K14 1250 aa12.83□□□□□ -0.36
ABCD4-214ENST00000489678 SMC5Q8IY18 1101 aa12.83□□□□□ -0.36
ABCD4-214ENST00000489678 HELBQ8NG08 1087 aaPredicted RBP12.83□□□□□ -0.36
ABCD4-214ENST00000489678 BICC1Q9H694 974 aaKnown RBP12.83□□□□□ -0.36
ABCD4-214ENST00000489678 RTCBQ9Y3I0 505 aaKnown RBP12.83□□□□□ -0.36
ABCD4-214ENST00000489678 ITGB4P16144 1822 aa12.82□□□□□ -0.36
ABCD4-214ENST00000489678 C5P01031 1676 aa12.82□□□□□ -0.36
ABCD4-214ENST00000489678 SRGAP3O43295 1099 aa12.82□□□□□ -0.36
ABCD4-214ENST00000489678 MAP4K4O95819 1239 aaPredicted RBP12.82□□□□□ -0.36
ABCD4-214ENST00000489678 R3HDM1Q15032 1099 aaKnown RBP12.82□□□□□ -0.36
ABCD4-214ENST00000489678 NEXNQ0ZGT2 675 aa12.82□□□□□ -0.36
ABCD4-214ENST00000489678 ANKRD45Q5TZF3 282 aa12.82□□□□□ -0.36
ABCD4-214ENST00000489678 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
ABCD4-214ENST00000489678 UBN2Q6ZU65 1347 aa12.81□□□□□ -0.36
ABCD4-214ENST00000489678 KCPQ6ZWJ8 1503 aa12.81□□□□□ -0.36
ABCD4-214ENST00000489678 CENPFP49454 3210 aa12.81□□□□□ -0.36
ABCD4-214ENST00000489678 NEURL1BA8MQ27 555 aa12.81□□□□□ -0.36
ABCD4-214ENST00000489678 MYH14Q7Z406 1995 aaKnown RBP12.81□□□□□ -0.36
ABCD4-214ENST00000489678 ZPR1O75312 459 aa12.8□□□□□ -0.36
ABCD4-214ENST00000489678 OS9Q13438 667 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms