RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 GNAI2P04899 355 aa22.38■■□□□ 1.17
POLR2J3-205ENST00000489144 C16orf71Q8IYS4 520 aaPredicted RBP22.37■■□□□ 1.17
POLR2J3-205ENST00000489144 HYPKQ9NX55 129 aa22.37■■□□□ 1.17
POLR2J3-205ENST00000489144 NRAPQ86VF7 1730 aa22.36■■□□□ 1.17
POLR2J3-205ENST00000489144 UBTFL1P0CB47 393 aaPredicted RBP22.36■■□□□ 1.17
POLR2J3-205ENST00000489144 PRIM1P49642 420 aaKnown RBP22.36■■□□□ 1.17
POLR2J3-205ENST00000489144 MRE11P49959 708 aa22.36■■□□□ 1.17
POLR2J3-205ENST00000489144 DDB1Q16531 1140 aa22.36■■□□□ 1.17
POLR2J3-205ENST00000489144 FAM161AQ3B820 660 aa22.36■■□□□ 1.17
POLR2J3-205ENST00000489144 RIC3Q7Z5B4 369 aa22.36■■□□□ 1.17
POLR2J3-205ENST00000489144 EXOC6BQ9Y2D4 811 aa22.36■■□□□ 1.17
POLR2J3-205ENST00000489144 NBPF26B4DH59 902 aa22.36■■□□□ 1.17
POLR2J3-205ENST00000489144 NBPF14Q5TI25 921 aa22.36■■□□□ 1.17
POLR2J3-205ENST00000489144 NBPF10Q6P3W6 841 aaKnown RBP22.36■■□□□ 1.17
POLR2J3-205ENST00000489144 NBPF15Q8N660 670 aa22.36■■□□□ 1.17
POLR2J3-205ENST00000489144 GLI3P10071 1580 aa22.35■■□□□ 1.17
POLR2J3-205ENST00000489144 PPP4R3BQ5MIZ7 849 aa22.35■■□□□ 1.17
POLR2J3-205ENST00000489144 KSR2Q6VAB6 950 aa22.35■■□□□ 1.17
POLR2J3-205ENST00000489144 MTERF4Q7Z6M4 381 aaKnown RBP22.35■■□□□ 1.17
POLR2J3-205ENST00000489144 SPATA31A5Q5VU36 1347 aa22.35■■□□□ 1.17
POLR2J3-205ENST00000489144 SPATA31A7Q8IWB4 1347 aa22.35■■□□□ 1.17
POLR2J3-205ENST00000489144 SEC24BO95487 1268 aa22.35■■□□□ 1.17
POLR2J3-205ENST00000489144 OTUD7AQ8TE49 926 aaPredicted RBP22.35■■□□□ 1.17
POLR2J3-205ENST00000489144 FAM182BQ5T319 152 aa22.34■■□□□ 1.17
POLR2J3-205ENST00000489144 LRP6O75581 1613 aa22.34■■□□□ 1.17
POLR2J3-205ENST00000489144 JCADQ9P266 1359 aa22.34■■□□□ 1.17
POLR2J3-205ENST00000489144 ATG3Q9NT62 314 aa22.34■■□□□ 1.17
POLR2J3-205ENST00000489144 KCPQ6ZWJ8 1503 aa22.33■■□□□ 1.17
POLR2J3-205ENST00000489144 EP400Q96L91 3159 aa22.33■■□□□ 1.17
POLR2J3-205ENST00000489144 MARCH10Q8NA82 808 aaPredicted RBP22.33■■□□□ 1.17
POLR2J3-205ENST00000489144 ATP5J2-PTCD1G3V325 749 aa22.33■■□□□ 1.16
POLR2J3-205ENST00000489144 LRP10Q7Z4F1 713 aa22.33■■□□□ 1.16
POLR2J3-205ENST00000489144 MYD88Q99836 296 aa22.33■■□□□ 1.16
POLR2J3-205ENST00000489144 PLEKHG2Q9H7P9 1386 aa22.32■■□□□ 1.16
POLR2J3-205ENST00000489144 SLIT2O94813 1529 aa22.32■■□□□ 1.16
POLR2J3-205ENST00000489144 GNAI3P08754 354 aa22.32■■□□□ 1.16
POLR2J3-205ENST00000489144 TTLL7Q6ZT98 887 aa22.32■■□□□ 1.16
POLR2J3-205ENST00000489144 DNAJC10Q8IXB1 793 aa22.32■■□□□ 1.16
POLR2J3-205ENST00000489144 RPAP2Q8IXW5 612 aaPredicted RBP22.32■■□□□ 1.16
POLR2J3-205ENST00000489144 GCC1Q96CN9 775 aa22.32■■□□□ 1.16
POLR2J3-205ENST00000489144 FAM13BQ9NYF5 915 aa22.32■■□□□ 1.16
POLR2J3-205ENST00000489144 UNC5CLQ8IV45 518 aa22.32■■□□□ 1.16
POLR2J3-205ENST00000489144 ZNF830Q96NB3 372 aaPredicted RBP22.32■■□□□ 1.16
POLR2J3-205ENST00000489144 DCTPP1Q9H773 170 aa22.31■■□□□ 1.16
POLR2J3-205ENST00000489144 C9orf78Q9NZ63 289 aaPredicted RBP22.31■■□□□ 1.16
POLR2J3-205ENST00000489144 IGKV5-2P06315 115 aa22.3■■□□□ 1.16
POLR2J3-205ENST00000489144 ITGB4P16144 1822 aa22.3■■□□□ 1.16
POLR2J3-205ENST00000489144 TNS2Q63HR2 1409 aa22.3■■□□□ 1.16
POLR2J3-205ENST00000489144 MEX3CQ5U5Q3 659 aaKnown RBP22.3■■□□□ 1.16
POLR2J3-205ENST00000489144 TRIM44Q96DX7 344 aaPredicted RBP22.3■■□□□ 1.16
POLR2J3-205ENST00000489144 SLC4A9Q96Q91 983 aa22.29■■□□□ 1.16
POLR2J3-205ENST00000489144 ZBTB3Q9H5J0 574 aa22.29■■□□□ 1.16
POLR2J3-205ENST00000489144 BCL9LQ86UU0 1499 aa22.29■■□□□ 1.16
POLR2J3-205ENST00000489144 KCNQ2O43526 872 aa22.29■■□□□ 1.16
POLR2J3-205ENST00000489144 DDX58O95786 925 aaKnown RBP22.29■■□□□ 1.16
POLR2J3-205ENST00000489144 ANKRD13DQ6ZTN6 518 aa22.29■■□□□ 1.16
POLR2J3-205ENST00000489144 CHMP4AQ9BY43 222 aa22.29■■□□□ 1.16
POLR2J3-205ENST00000489144 PXDNLA1KZ92 1463 aa22.29■■□□□ 1.16
POLR2J3-205ENST00000489144 PRDM10Q9NQV6 1147 aa22.28■■□□□ 1.16
POLR2J3-205ENST00000489144 OFD1O75665 1012 aa22.28■■□□□ 1.16
POLR2J3-205ENST00000489144 TSHZ3Q63HK5 1081 aa22.28■■□□□ 1.16
POLR2J3-205ENST00000489144 PPP1R42Q7Z4L9 355 aa22.28■■□□□ 1.16
POLR2J3-205ENST00000489144 USP21Q9UK80 565 aa22.28■■□□□ 1.16
POLR2J3-205ENST00000489144 WNK3Q9BYP7 1800 aa22.27■■□□□ 1.16
POLR2J3-205ENST00000489144 BRD2P25440 801 aaKnown RBP22.27■■□□□ 1.16
POLR2J3-205ENST00000489144 UBR2Q8IWV8 1755 aa22.26■■□□□ 1.15
POLR2J3-205ENST00000489144 KIF20AO95235 890 aa22.26■■□□□ 1.15
POLR2J3-205ENST00000489144 SRGAP3O43295 1099 aa22.26■■□□□ 1.15
POLR2J3-205ENST00000489144 ZSCAN20P17040 1043 aaPredicted RBP22.26■■□□□ 1.15
POLR2J3-205ENST00000489144 PTF1AQ7RTS3 328 aa22.26■■□□□ 1.15
POLR2J3-205ENST00000489144 DOT1LQ8TEK3 1739 aa22.26■■□□□ 1.15
POLR2J3-205ENST00000489144 PAPPAQ13219 1627 aa22.25■■□□□ 1.15
POLR2J3-205ENST00000489144 BCL9O00512 1426 aa22.25■■□□□ 1.15
POLR2J3-205ENST00000489144 ATP8B2P98198 1209 aa22.25■■□□□ 1.15
POLR2J3-205ENST00000489144 PLCD3Q8N3E9 789 aa22.25■■□□□ 1.15
POLR2J3-205ENST00000489144 KCNQ4P56696 695 aa22.25■■□□□ 1.15
POLR2J3-205ENST00000489144 HMMRO75330 724 aa22.24■■□□□ 1.15
POLR2J3-205ENST00000489144 ANP32BQ92688 251 aaKnown RBP22.24■■□□□ 1.15
POLR2J3-205ENST00000489144 SUCLG2Q96I99 432 aa22.24■■□□□ 1.15
POLR2J3-205ENST00000489144 LINS1Q8NG48 757 aa22.24■■□□□ 1.15
POLR2J3-205ENST00000489144 ZFP91Q96JP5 570 aaPredicted RBP22.24■■□□□ 1.15
POLR2J3-205ENST00000489144 THRAP3Q9Y2W1 955 aaKnown RBP22.24■■□□□ 1.15
POLR2J3-205ENST00000489144 N4BP2Q86UW6 1770 aaPredicted RBP22.23■■□□□ 1.15
POLR2J3-205ENST00000489144 NEURL1BA8MQ27 555 aa22.23■■□□□ 1.15
POLR2J3-205ENST00000489144 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.23■■□□□ 1.15
POLR2J3-205ENST00000489144 IL1RAPL2Q9NP60 686 aa22.23■■□□□ 1.15
POLR2J3-205ENST00000489144 METTL22Q9BUU2 404 aaPredicted RBP22.23■■□□□ 1.15
POLR2J3-205ENST00000489144 PA2G4Q9UQ80 394 aaKnown RBP22.23■■□□□ 1.15
POLR2J3-205ENST00000489144 LAMB4A4D0S4 1761 aa22.22■■□□□ 1.15
POLR2J3-205ENST00000489144 GRM8O00222 908 aa22.22■■□□□ 1.15
POLR2J3-205ENST00000489144 NEXNQ0ZGT2 675 aa22.22■■□□□ 1.15
POLR2J3-205ENST00000489144 ISY1Q9ULR0 285 aaKnown RBP22.22■■□□□ 1.15
POLR2J3-205ENST00000489144 NWD2Q9ULI1 1742 aa22.21■■□□□ 1.15
POLR2J3-205ENST00000489144 KAZALD1Q96I82 304 aa22.21■■□□□ 1.15
POLR2J3-205ENST00000489144 GRPEL1Q9HAV7 217 aa22.21■■□□□ 1.15
POLR2J3-205ENST00000489144 PLEKHM2Q8IWE5 1019 aa22.21■■□□□ 1.15
POLR2J3-205ENST00000489144 BICC1Q9H694 974 aaKnown RBP22.21■■□□□ 1.15
POLR2J3-205ENST00000489144 SURF6O75683 361 aaKnown RBP22.2■■□□□ 1.14
POLR2J3-205ENST00000489144 VPS72Q15906 364 aa22.2■■□□□ 1.14
POLR2J3-205ENST00000489144 EPHA10Q5JZY3 1008 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms