RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 SPTLC3Q9NUV7 552 aa23.37■■□□□ 1.33
HMG20B-213ENST00000488973 GTF2F1P35269 517 aaKnown RBP eCLIP23.37■■□□□ 1.33
HMG20B-213ENST00000488973 FUCA2Q9BTY2 467 aa23.37■■□□□ 1.33
HMG20B-213ENST00000488973 IL17REQ8NFR9 667 aa23.36■■□□□ 1.33
HMG20B-213ENST00000488973 ZNF830Q96NB3 372 aaPredicted RBP23.36■■□□□ 1.33
HMG20B-213ENST00000488973 RGPD8O14715 1765 aaPredicted RBP23.36■■□□□ 1.33
HMG20B-213ENST00000488973 USP42Q9H9J4 1324 aaKnown RBP23.35■■□□□ 1.33
HMG20B-213ENST00000488973 KIF20AO95235 890 aa23.34■■□□□ 1.33
HMG20B-213ENST00000488973 TTC12Q9H892 705 aaPredicted RBP23.34■■□□□ 1.33
HMG20B-213ENST00000488973 CHD2O14647 1828 aaKnown RBP23.34■■□□□ 1.33
HMG20B-213ENST00000488973 NWD1Q149M9 1564 aa23.34■■□□□ 1.33
HMG20B-213ENST00000488973 SRGAP3O43295 1099 aa23.34■■□□□ 1.33
HMG20B-213ENST00000488973 HSP90AB4PQ58FF6 505 aa23.34■■□□□ 1.33
HMG20B-213ENST00000488973 HDGFL1Q5TGJ6 251 aa23.34■■□□□ 1.33
HMG20B-213ENST00000488973 HYPKQ9NX55 129 aa23.33■■□□□ 1.33
HMG20B-213ENST00000488973 TTC41PQ6P2S7 1318 aa23.33■■□□□ 1.33
HMG20B-213ENST00000488973 FIBPO43427 364 aa23.33■■□□□ 1.33
HMG20B-213ENST00000488973 ZSCAN31Q96LW9 406 aaPredicted RBP23.33■■□□□ 1.33
HMG20B-213ENST00000488973 PHAXQ9H814 394 aaKnown RBP23.33■■□□□ 1.33
HMG20B-213ENST00000488973 PPP4R3BQ5MIZ7 849 aa23.32■■□□□ 1.32
HMG20B-213ENST00000488973 CASTP20810 708 aaKnown RBP23.32■■□□□ 1.32
HMG20B-213ENST00000488973 VPS53Q5VIR6 699 aa23.32■■□□□ 1.32
HMG20B-213ENST00000488973 CWC27Q6UX04 472 aaKnown RBP23.32■■□□□ 1.32
HMG20B-213ENST00000488973 MPNDQ8N594 471 aa23.32■■□□□ 1.32
HMG20B-213ENST00000488973 CCDC94Q9BW85 323 aaPredicted RBP23.32■■□□□ 1.32
HMG20B-213ENST00000488973 TMEM51Q9NW97 253 aa23.32■■□□□ 1.32
HMG20B-213ENST00000488973 TPM3P06753 285 aa23.31■■□□□ 1.32
HMG20B-213ENST00000488973 KCNA6P17658 529 aa23.31■■□□□ 1.32
HMG20B-213ENST00000488973 RUFY2Q8WXA3 655 aa23.31■■□□□ 1.32
HMG20B-213ENST00000488973 TM6SF1Q9BZW5 370 aa23.31■■□□□ 1.32
HMG20B-213ENST00000488973 SH2B1Q9NRF2 756 aaPredicted RBP23.31■■□□□ 1.32
HMG20B-213ENST00000488973 GLRX3O76003 335 aaKnown RBP23.31■■□□□ 1.32
HMG20B-213ENST00000488973 MTMR6Q9Y217 621 aa23.31■■□□□ 1.32
HMG20B-213ENST00000488973 GJB2P29033 226 aa23.3■■□□□ 1.32
HMG20B-213ENST00000488973 SPG7Q9UQ90 795 aa23.3■■□□□ 1.32
HMG20B-213ENST00000488973 SETD1BQ9UPS6 1966 aaKnown RBP23.3■■□□□ 1.32
HMG20B-213ENST00000488973 MARF1Q9Y4F3 1742 aaKnown RBP23.3■■□□□ 1.32
HMG20B-213ENST00000488973 KCNB2Q92953 911 aa23.3■■□□□ 1.32
HMG20B-213ENST00000488973 LARP6Q9BRS8 491 aaKnown RBP23.3■■□□□ 1.32
HMG20B-213ENST00000488973 USP54Q70EL1 1684 aa23.29■■□□□ 1.32
HMG20B-213ENST00000488973 ZSCAN20P17040 1043 aaPredicted RBP23.29■■□□□ 1.32
HMG20B-213ENST00000488973 GIMAP6Q6P9H5 292 aa23.29■■□□□ 1.32
HMG20B-213ENST00000488973 DIAPH3Q9NSV4 1193 aa23.29■■□□□ 1.32
HMG20B-213ENST00000488973 ANKARQ7Z5J8 1434 aa23.29■■□□□ 1.32
HMG20B-213ENST00000488973 LARGE1O95461 756 aa23.29■■□□□ 1.32
HMG20B-213ENST00000488973 GTPBP4Q9BZE4 634 aaKnown RBP23.29■■□□□ 1.32
HMG20B-213ENST00000488973 PDRG1Q9NUG6 133 aa23.29■■□□□ 1.32
HMG20B-213ENST00000488973 NBPF7P0C2Y1 421 aaPredicted RBP23.28■■□□□ 1.32
HMG20B-213ENST00000488973 HOXC9P31274 260 aa23.28■■□□□ 1.32
HMG20B-213ENST00000488973 DNM1Q05193 864 aaKnown RBP23.28■■□□□ 1.32
HMG20B-213ENST00000488973 PAXIP1Q6ZW49 1069 aaPredicted RBP23.28■■□□□ 1.32
HMG20B-213ENST00000488973 CCDC83Q8IWF9 413 aa23.28■■□□□ 1.32
HMG20B-213ENST00000488973 NGDNQ8NEJ9 315 aaKnown RBP23.28■■□□□ 1.32
HMG20B-213ENST00000488973 ZSWIM6Q9HCJ5 1215 aa23.28■■□□□ 1.32
HMG20B-213ENST00000488973 KDM3BQ7LBC6 1761 aa23.27■■□□□ 1.32
HMG20B-213ENST00000488973 BEND3Q5T5X7 828 aa23.27■■□□□ 1.32
HMG20B-213ENST00000488973 CHMP4AQ9BY43 222 aa23.27■■□□□ 1.32
HMG20B-213ENST00000488973 AEBP2Q6ZN18 517 aaPredicted RBP23.27■■□□□ 1.31
HMG20B-213ENST00000488973 CYP46A1Q9Y6A2 500 aa23.27■■□□□ 1.31
HMG20B-213ENST00000488973 CPA1P15085 419 aa23.26■■□□□ 1.31
HMG20B-213ENST00000488973 C17orf53Q8N3J3 647 aaPredicted RBP23.26■■□□□ 1.31
HMG20B-213ENST00000488973 KIAA1524Q8TCG1 905 aa23.26■■□□□ 1.31
HMG20B-213ENST00000488973 KIF3AQ9Y496 699 aa23.26■■□□□ 1.31
HMG20B-213ENST00000488973 HOXB7P09629 217 aa23.25■■□□□ 1.31
HMG20B-213ENST00000488973 CCDC192P0DO97 292 aa23.25■■□□□ 1.31
HMG20B-213ENST00000488973 TPRNQ4KMQ1 711 aa23.25■■□□□ 1.31
HMG20B-213ENST00000488973 ZNF710Q8N1W2 664 aa23.25■■□□□ 1.31
HMG20B-213ENST00000488973 DNAAF4Q8WXU2 420 aa23.25■■□□□ 1.31
HMG20B-213ENST00000488973 JAKMIP1Q96N16 626 aaKnown RBP23.25■■□□□ 1.31
HMG20B-213ENST00000488973 ZBTB7CA1YPR0 619 aa23.24■■□□□ 1.31
HMG20B-213ENST00000488973 AP5Z1O43299 807 aa23.24■■□□□ 1.31
HMG20B-213ENST00000488973 PTH1RQ03431 593 aa23.24■■□□□ 1.31
HMG20B-213ENST00000488973 MED1Q15648 1581 aaPredicted RBP23.24■■□□□ 1.31
HMG20B-213ENST00000488973 CEMIPQ8WUJ3 1361 aa23.24■■□□□ 1.31
HMG20B-213ENST00000488973 GOLGA6L6A8MZA4 724 aa23.24■■□□□ 1.31
HMG20B-213ENST00000488973 MTX1Q13505 466 aa23.24■■□□□ 1.31
HMG20B-213ENST00000488973 ADCK5Q3MIX3 580 aa23.24■■□□□ 1.31
HMG20B-213ENST00000488973 NLRP6P59044 892 aa23.23■■□□□ 1.31
HMG20B-213ENST00000488973 PRPF40BQ6NWY9 871 aaKnown RBP23.23■■□□□ 1.31
HMG20B-213ENST00000488973 CLASRPQ8N2M8 674 aaKnown RBP23.23■■□□□ 1.31
HMG20B-213ENST00000488973 PLCB2Q00722 1185 aa23.23■■□□□ 1.31
HMG20B-213ENST00000488973 TAF3Q5VWG9 929 aa23.23■■□□□ 1.31
HMG20B-213ENST00000488973 ECHDC1Q9NTX5 307 aa23.23■■□□□ 1.31
HMG20B-213ENST00000488973 OS9Q13438 667 aaPredicted RBP23.22■■□□□ 1.31
HMG20B-213ENST00000488973 NECTIN1Q15223 517 aa23.22■■□□□ 1.31
HMG20B-213ENST00000488973 KCNF1Q9H3M0 494 aa23.22■■□□□ 1.31
HMG20B-213ENST00000488973 PI4KAP2A4QPH2 592 aa23.22■■□□□ 1.31
HMG20B-213ENST00000488973 ST3GAL1Q11201 340 aa23.22■■□□□ 1.31
HMG20B-213ENST00000488973 PI4KAP1Q8N8J0 262 aa23.22■■□□□ 1.31
HMG20B-213ENST00000488973 GPATCH3Q96I76 525 aa23.22■■□□□ 1.31
HMG20B-213ENST00000488973 PRDM10Q9NQV6 1147 aa23.22■■□□□ 1.31
HMG20B-213ENST00000488973 ZKSCAN1P17029 563 aaPredicted RBP23.21■■□□□ 1.31
HMG20B-213ENST00000488973 EIF2S2P20042 333 aaKnown RBP23.21■■□□□ 1.31
HMG20B-213ENST00000488973 EIF4A1P60842 406 aaKnown RBP23.21■■□□□ 1.31
HMG20B-213ENST00000488973 ME3Q16798 604 aa23.21■■□□□ 1.31
HMG20B-213ENST00000488973 ELP1O95163 1332 aa23.21■■□□□ 1.31
HMG20B-213ENST00000488973 VPS37CA5D8V6 355 aaPredicted RBP23.21■■□□□ 1.31
HMG20B-213ENST00000488973 JARID2Q92833 1246 aaPredicted RBP23.21■■□□□ 1.31
HMG20B-213ENST00000488973 ARID3AQ99856 593 aa23.21■■□□□ 1.31
HMG20B-213ENST00000488973 NPHP4O75161 1426 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 585.7 ms