RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 PCDH11XQ9BZA7 1347 aa17.39■□□□□ 0.37
RPL13A-212ENST00000488946 PCDH11YQ9BZA8 1340 aa17.39■□□□□ 0.37
RPL13A-212ENST00000488946 MTX1Q13505 466 aa17.39■□□□□ 0.37
RPL13A-212ENST00000488946 SLIT2O94813 1529 aa17.39■□□□□ 0.37
RPL13A-212ENST00000488946 PPP1R42Q7Z4L9 355 aa17.38■□□□□ 0.37
RPL13A-212ENST00000488946 ZNF496Q96IT1 587 aaPredicted RBP17.38■□□□□ 0.37
RPL13A-212ENST00000488946 CARD10Q9BWT7 1032 aa17.38■□□□□ 0.37
RPL13A-212ENST00000488946 AOX1Q06278 1338 aa17.38■□□□□ 0.37
RPL13A-212ENST00000488946 RAB11FIP3O75154 756 aa17.38■□□□□ 0.37
RPL13A-212ENST00000488946 DDX58O95786 925 aaKnown RBP17.38■□□□□ 0.37
RPL13A-212ENST00000488946 SNX21Q969T3 373 aa17.38■□□□□ 0.37
RPL13A-212ENST00000488946 ARXQ96QS3 562 aa17.38■□□□□ 0.37
RPL13A-212ENST00000488946 KIF2CQ99661 725 aa17.38■□□□□ 0.37
RPL13A-212ENST00000488946 STAP2Q9UGK3 403 aa17.38■□□□□ 0.37
RPL13A-212ENST00000488946 UTYO14607 1347 aa17.38■□□□□ 0.37
RPL13A-212ENST00000488946 TOM1L2Q6ZVM7 507 aa17.37■□□□□ 0.37
RPL13A-212ENST00000488946 LINS1Q8NG48 757 aa17.37■□□□□ 0.37
RPL13A-212ENST00000488946 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.37■□□□□ 0.37
RPL13A-212ENST00000488946 UNC5CLQ8IV45 518 aa17.37■□□□□ 0.37
RPL13A-212ENST00000488946 GZF1Q9H116 711 aaPredicted RBP17.37■□□□□ 0.37
RPL13A-212ENST00000488946 BTG4Q9NY30 223 aa17.37■□□□□ 0.37
RPL13A-212ENST00000488946 SNRPA1P09661 255 aaKnown RBP17.36■□□□□ 0.37
RPL13A-212ENST00000488946 MX1P20591 662 aa17.36■□□□□ 0.37
RPL13A-212ENST00000488946 NKX1-1Q15270 411 aaPredicted RBP17.36■□□□□ 0.37
RPL13A-212ENST00000488946 LRP10Q7Z4F1 713 aa17.36■□□□□ 0.37
RPL13A-212ENST00000488946 FMNL2Q96PY5 1086 aa17.36■□□□□ 0.37
RPL13A-212ENST00000488946 ARFGEF2Q9Y6D5 1785 aa17.36■□□□□ 0.37
RPL13A-212ENST00000488946 BCL9LQ86UU0 1499 aa17.36■□□□□ 0.37
RPL13A-212ENST00000488946 TRAK2O60296 914 aa17.36■□□□□ 0.37
RPL13A-212ENST00000488946 TTC5Q8N0Z6 440 aa17.36■□□□□ 0.37
RPL13A-212ENST00000488946 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
RPL13A-212ENST00000488946 PANK2Q9BZ23 570 aa17.36■□□□□ 0.37
RPL13A-212ENST00000488946 TOGARAM1Q9Y4F4 1720 aa17.36■□□□□ 0.37
RPL13A-212ENST00000488946 KCPQ6ZWJ8 1503 aa17.35■□□□□ 0.37
RPL13A-212ENST00000488946 SRGAP3O43295 1099 aa17.35■□□□□ 0.37
RPL13A-212ENST00000488946 QTRT2Q9H974 415 aaKnown RBP17.35■□□□□ 0.37
RPL13A-212ENST00000488946 HDAC5Q9UQL6 1122 aa17.35■□□□□ 0.37
RPL13A-212ENST00000488946 CABP4P57796 275 aa17.35■□□□□ 0.37
RPL13A-212ENST00000488946 CASC1Q6TDU7 716 aa17.35■□□□□ 0.37
RPL13A-212ENST00000488946 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
RPL13A-212ENST00000488946 HSCBQ8IWL3 235 aa17.34■□□□□ 0.37
RPL13A-212ENST00000488946 NRAPQ86VF7 1730 aa17.34■□□□□ 0.37
RPL13A-212ENST00000488946 TNS2Q63HR2 1409 aa17.34■□□□□ 0.37
RPL13A-212ENST00000488946 IL2RBP14784 551 aa17.33■□□□□ 0.37
RPL13A-212ENST00000488946 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.36
RPL13A-212ENST00000488946 POTEAQ6S8J7 498 aa17.33■□□□□ 0.36
RPL13A-212ENST00000488946 ERBB4Q15303 1308 aa17.32■□□□□ 0.36
RPL13A-212ENST00000488946 SURF6O75683 361 aaKnown RBP17.32■□□□□ 0.36
RPL13A-212ENST00000488946 EVA1CP58658 441 aa17.32■□□□□ 0.36
RPL13A-212ENST00000488946 CWF19L2Q2TBE0 894 aaKnown RBP17.32■□□□□ 0.36
RPL13A-212ENST00000488946 HSP90AB4PQ58FF6 505 aa17.32■□□□□ 0.36
RPL13A-212ENST00000488946 LARP1Q6PKG0 1096 aaKnown RBP17.32■□□□□ 0.36
RPL13A-212ENST00000488946 RHPN1Q8TCX5 695 aa17.32■□□□□ 0.36
RPL13A-212ENST00000488946 KIF1BPQ96EK5 621 aa17.32■□□□□ 0.36
RPL13A-212ENST00000488946 AFDNP55196 1824 aaKnown RBP17.32■□□□□ 0.36
RPL13A-212ENST00000488946 GRM8O00222 908 aa17.32■□□□□ 0.36
RPL13A-212ENST00000488946 C9orf78Q9NZ63 289 aaPredicted RBP17.32■□□□□ 0.36
RPL13A-212ENST00000488946 NUP188Q5SRE5 1749 aa17.32■□□□□ 0.36
RPL13A-212ENST00000488946 ATRNO75882 1429 aa17.32■□□□□ 0.36
RPL13A-212ENST00000488946 IGKV5-2P06315 115 aa17.31■□□□□ 0.36
RPL13A-212ENST00000488946 MRE11P49959 708 aa17.31■□□□□ 0.36
RPL13A-212ENST00000488946 XAGE3Q8WTP9 111 aa17.31■□□□□ 0.36
RPL13A-212ENST00000488946 USP26Q9BXU7 913 aa17.31■□□□□ 0.36
RPL13A-212ENST00000488946 USP16Q9Y5T5 823 aa17.31■□□□□ 0.36
RPL13A-212ENST00000488946 DDX11L8A8MPP1 907 aa17.31■□□□□ 0.36
RPL13A-212ENST00000488946 VPS72Q15906 364 aa17.31■□□□□ 0.36
RPL13A-212ENST00000488946 WNK3Q9BYP7 1800 aa17.3■□□□□ 0.36
RPL13A-212ENST00000488946 STRN4Q9NRL3 753 aa17.3■□□□□ 0.36
RPL13A-212ENST00000488946 AK9Q5TCS8 1911 aa17.3■□□□□ 0.36
RPL13A-212ENST00000488946 USP42Q9H9J4 1324 aaKnown RBP17.3■□□□□ 0.36
RPL13A-212ENST00000488946 RXRBP28702 533 aa17.3■□□□□ 0.36
RPL13A-212ENST00000488946 AIMP1Q12904 312 aaKnown RBP17.3■□□□□ 0.36
RPL13A-212ENST00000488946 KAZALD1Q96I82 304 aa17.3■□□□□ 0.36
RPL13A-212ENST00000488946 METTL22Q9BUU2 404 aaPredicted RBP17.3■□□□□ 0.36
RPL13A-212ENST00000488946 REC8O95072 547 aa17.29■□□□□ 0.36
RPL13A-212ENST00000488946 DDIT3P35638 169 aa17.29■□□□□ 0.36
RPL13A-212ENST00000488946 RBM6P78332 1123 aaKnown RBP17.29■□□□□ 0.36
RPL13A-212ENST00000488946 TSHZ3Q63HK5 1081 aa17.29■□□□□ 0.36
RPL13A-212ENST00000488946 COPS6Q7L5N1 327 aa17.29■□□□□ 0.36
RPL13A-212ENST00000488946 RIC3Q7Z5B4 369 aa17.29■□□□□ 0.36
RPL13A-212ENST00000488946 COL15A1P39059 1388 aa17.29■□□□□ 0.36
RPL13A-212ENST00000488946 DISP2A7MBM2 1401 aa17.29■□□□□ 0.36
RPL13A-212ENST00000488946 NEURL1BA8MQ27 555 aa17.29■□□□□ 0.36
RPL13A-212ENST00000488946 ERC2O15083 957 aa17.29■□□□□ 0.36
RPL13A-212ENST00000488946 MYL6BP14649 208 aa17.29■□□□□ 0.36
RPL13A-212ENST00000488946 SUCLG2Q96I99 432 aa17.29■□□□□ 0.36
RPL13A-212ENST00000488946 IL1RAPL2Q9NP60 686 aa17.29■□□□□ 0.36
RPL13A-212ENST00000488946 CCDC9Q9Y3X0 531 aaKnown RBP17.29■□□□□ 0.36
RPL13A-212ENST00000488946 NEXNQ0ZGT2 675 aa17.28■□□□□ 0.36
RPL13A-212ENST00000488946 BBXQ8WY36 941 aaPredicted RBP17.28■□□□□ 0.36
RPL13A-212ENST00000488946 GJD4Q96KN9 370 aaPredicted RBP17.28■□□□□ 0.36
RPL13A-212ENST00000488946 ESPNB1AK53 854 aa17.27■□□□□ 0.35
RPL13A-212ENST00000488946 RABEP1Q15276 862 aa17.27■□□□□ 0.35
RPL13A-212ENST00000488946 TAF7LQ5H9L4 462 aa17.27■□□□□ 0.35
RPL13A-212ENST00000488946 PI4K2BQ8TCG2 481 aa17.27■□□□□ 0.35
RPL13A-212ENST00000488946 GRPEL1Q9HAV7 217 aa17.27■□□□□ 0.35
RPL13A-212ENST00000488946 ISY1Q9ULR0 285 aaKnown RBP17.27■□□□□ 0.35
RPL13A-212ENST00000488946 GTF2E1P29083 439 aaPredicted RBP17.26■□□□□ 0.35
RPL13A-212ENST00000488946 GCKRQ14397 625 aa17.26■□□□□ 0.35
RPL13A-212ENST00000488946 ANKRD13DQ6ZTN6 518 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms