RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 GIGYF1O75420 1035 aaPredicted RBP16.05■□□□□ 0.16
NELFE-209ENST00000488426 ZBTB7BO15156 539 aaPredicted RBP16.05■□□□□ 0.16
NELFE-209ENST00000488426 SSFA2P28290 1259 aa16.05■□□□□ 0.16
NELFE-209ENST00000488426 FLIIQ13045 1269 aa16.05■□□□□ 0.16
NELFE-209ENST00000488426 FLAD1Q8NFF5 587 aa16.05■□□□□ 0.16
NELFE-209ENST00000488426 RWDD1Q9H446 243 aaPredicted RBP16.05■□□□□ 0.16
NELFE-209ENST00000488426 IGHDP01880 384 aa16.04■□□□□ 0.16
NELFE-209ENST00000488426 G2E3Q7L622 706 aa16.04■□□□□ 0.16
NELFE-209ENST00000488426 PXDNLA1KZ92 1463 aa16.04■□□□□ 0.16
NELFE-209ENST00000488426 DNAJC10Q8IXB1 793 aa16.03■□□□□ 0.16
NELFE-209ENST00000488426 ARHGEF1Q92888 912 aaKnown RBP16.03■□□□□ 0.16
NELFE-209ENST00000488426 UBR2Q8IWV8 1755 aa16.03■□□□□ 0.16
NELFE-209ENST00000488426 PRKCSHP14314 528 aaPredicted RBP16.03■□□□□ 0.16
NELFE-209ENST00000488426 NECTIN2Q92692 538 aa16.03■□□□□ 0.16
NELFE-209ENST00000488426 LAMB4A4D0S4 1761 aa16.02■□□□□ 0.16
NELFE-209ENST00000488426 EIF2S2P20042 333 aaKnown RBP16.02■□□□□ 0.16
NELFE-209ENST00000488426 CRKLP46109 303 aaKnown RBP16.02■□□□□ 0.16
NELFE-209ENST00000488426 CCT4P50991 539 aaKnown RBP16.02■□□□□ 0.16
NELFE-209ENST00000488426 HDAC1Q13547 482 aaPredicted RBP16.02■□□□□ 0.16
NELFE-209ENST00000488426 RC3H1Q5TC82 1133 aaKnown RBP16.02■□□□□ 0.16
NELFE-209ENST00000488426 INTS5Q6P9B9 1019 aaKnown RBP16.02■□□□□ 0.16
NELFE-209ENST00000488426 TTC5Q8N0Z6 440 aa16.02■□□□□ 0.16
NELFE-209ENST00000488426 DBF4Q9UBU7 674 aaPredicted RBP16.02■□□□□ 0.16
NELFE-209ENST00000488426 RTCBQ9Y3I0 505 aaKnown RBP16.02■□□□□ 0.16
NELFE-209ENST00000488426 RPS6KA4O75676 772 aa16.01■□□□□ 0.15
NELFE-209ENST00000488426 FKBP5Q13451 457 aaPredicted RBP16.01■□□□□ 0.15
NELFE-209ENST00000488426 TRAPPC3LQ5T215 181 aa16.01■□□□□ 0.15
NELFE-209ENST00000488426 TSHZ2Q9NRE2 1034 aa16.01■□□□□ 0.15
NELFE-209ENST00000488426 COL5A3P25940 1745 aaPredicted RBP16.01■□□□□ 0.15
NELFE-209ENST00000488426 FMNL2Q96PY5 1086 aa16.01■□□□□ 0.15
NELFE-209ENST00000488426 CHPF2Q9P2E5 772 aa16.01■□□□□ 0.15
NELFE-209ENST00000488426 CNTNAP4Q9C0A0 1308 aa16.01■□□□□ 0.15
NELFE-209ENST00000488426 ZNF831Q5JPB2 1677 aa15.99■□□□□ 0.15
NELFE-209ENST00000488426 ANP32EQ9BTT0 268 aa15.99■□□□□ 0.15
NELFE-209ENST00000488426 SRP68Q9UHB9 627 aaKnown RBP15.99■□□□□ 0.15
NELFE-209ENST00000488426 TJP1Q07157 1748 aa15.99■□□□□ 0.15
NELFE-209ENST00000488426 KCPQ6ZWJ8 1503 aa15.99■□□□□ 0.15
NELFE-209ENST00000488426 SNRPA1P09661 255 aaKnown RBP15.99■□□□□ 0.15
NELFE-209ENST00000488426 YY1P25490 414 aa15.99■□□□□ 0.15
NELFE-209ENST00000488426 HMGB2P26583 209 aaKnown RBP15.99■□□□□ 0.15
NELFE-209ENST00000488426 ZNF496Q96IT1 587 aaPredicted RBP15.99■□□□□ 0.15
NELFE-209ENST00000488426 WWC3Q9ULE0 1092 aa15.99■□□□□ 0.15
NELFE-209ENST00000488426 CYP19A1P11511 503 aaPredicted RBP15.98■□□□□ 0.15
NELFE-209ENST00000488426 GYS1P13807 737 aa15.98■□□□□ 0.15
NELFE-209ENST00000488426 YBX3P16989 372 aaKnown RBP eCLIP15.98■□□□□ 0.153e-7■■■□□ 19.1
NELFE-209ENST00000488426 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
NELFE-209ENST00000488426 F6X3S4 739 aa15.97■□□□□ 0.15
NELFE-209ENST00000488426 MMP10P09238 476 aa15.97■□□□□ 0.15
NELFE-209ENST00000488426 GPR162Q16538 588 aa15.97■□□□□ 0.15
NELFE-209ENST00000488426 HYPKQ9NX55 129 aa15.97■□□□□ 0.15
NELFE-209ENST00000488426 SLC4A10Q6U841 1118 aa15.97■□□□□ 0.15
NELFE-209ENST00000488426 PHAXQ9H814 394 aaKnown RBP15.97■□□□□ 0.15
NELFE-209ENST00000488426 DDX21Q9NR30 783 aaKnown RBP eCLIP15.97■□□□□ 0.15
NELFE-209ENST00000488426 PRAMEF22A3QJZ6 481 aa15.96■□□□□ 0.15
NELFE-209ENST00000488426 RFC4P35249 363 aa15.96■□□□□ 0.15
NELFE-209ENST00000488426 ZBTB1Q9Y2K1 713 aa15.95■□□□□ 0.14
NELFE-209ENST00000488426 ATP10DQ9P241 1426 aa15.95■□□□□ 0.14
NELFE-209ENST00000488426 SMC5Q8IY18 1101 aa15.95■□□□□ 0.14
NELFE-209ENST00000488426 CCDC87Q9NVE4 849 aa15.95■□□□□ 0.14
NELFE-209ENST00000488426 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
NELFE-209ENST00000488426 ERBB4Q15303 1308 aa15.94■□□□□ 0.14
NELFE-209ENST00000488426 ADRA2BP18089 450 aa15.93■□□□□ 0.14
NELFE-209ENST00000488426 MEIS3Q99687 375 aa15.93■□□□□ 0.14
NELFE-209ENST00000488426 C4AP0C0L4 1744 aa15.93■□□□□ 0.14
NELFE-209ENST00000488426 ADCY9O60503 1353 aa15.93■□□□□ 0.14
NELFE-209ENST00000488426 GNAI3P08754 354 aa15.93■□□□□ 0.14
NELFE-209ENST00000488426 PDIA6Q15084 440 aa15.93■□□□□ 0.14
NELFE-209ENST00000488426 PROSER3Q2NL68 480 aa15.93■□□□□ 0.14
NELFE-209ENST00000488426 NLGN1Q8N2Q7 840 aa15.93■□□□□ 0.14
NELFE-209ENST00000488426 DNAAF4Q8WXU2 420 aa15.93■□□□□ 0.14
NELFE-209ENST00000488426 C1orf115Q9H7X2 142 aa15.93■□□□□ 0.14
NELFE-209ENST00000488426 USP42Q9H9J4 1324 aaKnown RBP15.92■□□□□ 0.14
NELFE-209ENST00000488426 DDX58O95786 925 aaKnown RBP15.92■□□□□ 0.14
NELFE-209ENST00000488426 ANXA1P04083 346 aa15.92■□□□□ 0.14
NELFE-209ENST00000488426 RPAP2Q8IXW5 612 aaPredicted RBP15.92■□□□□ 0.14
NELFE-209ENST00000488426 PI4KAP2A4QPH2 592 aa15.91■□□□□ 0.14
NELFE-209ENST00000488426 USPL1Q5W0Q7 1092 aa15.91■□□□□ 0.14
NELFE-209ENST00000488426 VSIG10Q8N0Z9 540 aa15.91■□□□□ 0.14
NELFE-209ENST00000488426 ANKRD44Q8N8A2 993 aa15.91■□□□□ 0.14
NELFE-209ENST00000488426 PI4KAP1Q8N8J0 262 aa15.91■□□□□ 0.14
NELFE-209ENST00000488426 GCC1Q96CN9 775 aa15.91■□□□□ 0.14
NELFE-209ENST00000488426 PDZRN3Q9UPQ7 1066 aa15.91■□□□□ 0.14
NELFE-209ENST00000488426 USP16Q9Y5T5 823 aa15.91■□□□□ 0.14
NELFE-209ENST00000488426 CICQ96RK0 1608 aaPredicted RBP15.91■□□□□ 0.14
NELFE-209ENST00000488426 PIP4K2AP48426 406 aaPredicted RBP15.91■□□□□ 0.14
NELFE-209ENST00000488426 DDR1Q08345 913 aa15.91■□□□□ 0.14
NELFE-209ENST00000488426 KSR2Q6VAB6 950 aa15.91■□□□□ 0.14
NELFE-209ENST00000488426 SRCIN1Q9C0H9 1055 aa15.91■□□□□ 0.14
NELFE-209ENST00000488426 BCL2L12Q9HB09 334 aa15.91■□□□□ 0.14
NELFE-209ENST00000488426 A1BGP04217 495 aa15.9■□□□□ 0.14
NELFE-209ENST00000488426 SKAP1Q86WV1 359 aa15.9■□□□□ 0.14
NELFE-209ENST00000488426 SIRT2Q8IXJ6 389 aa15.9■□□□□ 0.14
NELFE-209ENST00000488426 IBTKQ9P2D0 1353 aaPredicted RBP15.9■□□□□ 0.14
NELFE-209ENST00000488426 GNAI2P04899 355 aa15.89■□□□□ 0.13
NELFE-209ENST00000488426 BEND3Q5T5X7 828 aa15.89■□□□□ 0.13
NELFE-209ENST00000488426 CEP85Q6P2H3 762 aa15.89■□□□□ 0.13
NELFE-209ENST00000488426 A0A0G2JLW4 131 aa15.88■□□□□ 0.13
NELFE-209ENST00000488426 TM4SF1P30408 202 aa15.88■□□□□ 0.13
NELFE-209ENST00000488426 LRP10Q7Z4F1 713 aa15.88■□□□□ 0.13
NELFE-209ENST00000488426 ALDH1L1O75891 902 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms