RNA–Protein interactions for RNA: ENST00000488010.5

TMF1-203, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 3,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-203ENST00000488010 U2AF2P26368 475 aaKnown RBP eCLIP11.94□□□□□ -0.56e-7■■□□□ 13.3
TMF1-203ENST00000488010 STK3Q13188 491 aa11.94□□□□□ -0.5
TMF1-203ENST00000488010 ME3Q16798 604 aa11.94□□□□□ -0.5
TMF1-203ENST00000488010 C16orf45Q96MC5 204 aaPredicted RBP11.94□□□□□ -0.5
TMF1-203ENST00000488010 NUP62CLQ9H1M0 184 aa11.94□□□□□ -0.5
TMF1-203ENST00000488010 PI4KAP2A4QPH2 592 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 LRMPQ12912 555 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 MAP3K11Q16584 847 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 TTC6Q86TZ1 520 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 PI4KAP1Q8N8J0 262 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 RUFY2Q8WXA3 655 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 SLC26A8Q96RN1 970 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 OVOS2A0A0J9YW53 1432 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 OVOS2Q6IE36 1432 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 MON2Q7Z3U7 1717 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 C3P01024 1663 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 NLRP6P59044 892 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 CDC37L1Q7L3B6 337 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 CCDC186Q7Z3E2 898 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 PA2G4Q9UQ80 394 aaKnown RBP11.93□□□□□ -0.5
TMF1-203ENST00000488010 ITSN1Q15811 1721 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 RICTORQ6R327 1708 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 FLT4P35916 1363 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 NRKQ7Z2Y5 1582 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 IFIT2P09913 472 aaKnown RBP11.93□□□□□ -0.5
TMF1-203ENST00000488010 ZKSCAN1P17029 563 aaPredicted RBP11.93□□□□□ -0.5
TMF1-203ENST00000488010 ZSCAN20P17040 1043 aaPredicted RBP11.93□□□□□ -0.5
TMF1-203ENST00000488010 GTF2F1P35269 517 aaKnown RBP eCLIP11.93□□□□□ -0.5
TMF1-203ENST00000488010 KRT85P78386 507 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 CLASRPQ8N2M8 674 aaKnown RBP11.93□□□□□ -0.5
TMF1-203ENST00000488010 TRIM5Q9C035 493 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 TNMDQ9H2S6 317 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 CHPF2Q9P2E5 772 aa11.93□□□□□ -0.5
TMF1-203ENST00000488010 PEAK1Q9H792 1746 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 GLRX3O76003 335 aaKnown RBP11.92□□□□□ -0.5
TMF1-203ENST00000488010 TYRO3Q06418 890 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 DMTNQ08495 405 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 USP6P35125 1406 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 HDGFP51858 240 aaKnown RBP11.92□□□□□ -0.5
TMF1-203ENST00000488010 ANO6Q4KMQ2 910 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 FAM200AQ8TCP9 573 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 ZNF592Q92610 1267 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 IL17RAQ96F46 866 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 DACT1Q9NYF0 836 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 NRBP1Q9UHY1 535 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 TPCN1Q9ULQ1 816 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 CEP170BQ9Y4F5 1589 aaPredicted RBP11.92□□□□□ -0.5
TMF1-203ENST00000488010 FAM69CQ0P6D2 419 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 COL9A3Q14050 684 aaPredicted RBP11.92□□□□□ -0.5
TMF1-203ENST00000488010 POLA2Q14181 598 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 VPS53Q5VIR6 699 aa11.92□□□□□ -0.5
TMF1-203ENST00000488010 ST3GAL1Q11201 340 aa11.91□□□□□ -0.5
TMF1-203ENST00000488010 AACSQ86V21 672 aa11.91□□□□□ -0.5
TMF1-203ENST00000488010 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
TMF1-203ENST00000488010 RBM8AQ9Y5S9 174 aaKnown RBP11.91□□□□□ -0.5
TMF1-203ENST00000488010 TPM3P06753 285 aa11.91□□□□□ -0.5
TMF1-203ENST00000488010 BICD2Q8TD16 824 aa11.91□□□□□ -0.5
TMF1-203ENST00000488010 DNAAF4Q8WXU2 420 aa11.91□□□□□ -0.5
TMF1-203ENST00000488010 FAM227BQ96M60 508 aa11.91□□□□□ -0.5
TMF1-203ENST00000488010 SH2B1Q9NRF2 756 aaPredicted RBP11.91□□□□□ -0.5
TMF1-203ENST00000488010 C9orf78Q9NZ63 289 aaPredicted RBP11.91□□□□□ -0.5
TMF1-203ENST00000488010 MRVI1Q9Y6F6 885 aa11.91□□□□□ -0.5
TMF1-203ENST00000488010 IGSF1Q8N6C5 1336 aa11.91□□□□□ -0.5
TMF1-203ENST00000488010 PLEKHG3A1L390 1219 aa11.9□□□□□ -0.5
TMF1-203ENST00000488010 EPB41L2O43491 1005 aaKnown RBP11.9□□□□□ -0.5
TMF1-203ENST00000488010 SPATA32Q96LK8 384 aa11.9□□□□□ -0.5
TMF1-203ENST00000488010 SBNO1A3KN83 1393 aa11.9□□□□□ -0.5
TMF1-203ENST00000488010 FOSBP53539 338 aa11.9□□□□□ -0.5
TMF1-203ENST00000488010 ECHDC1Q9NTX5 307 aa11.9□□□□□ -0.5
TMF1-203ENST00000488010 CEBPZQ03701 1054 aaKnown RBP11.9□□□□□ -0.51
TMF1-203ENST00000488010 HSP90AB4PQ58FF6 505 aa11.9□□□□□ -0.51
TMF1-203ENST00000488010 GPATCH3Q96I76 525 aa11.9□□□□□ -0.51
TMF1-203ENST00000488010 CBX8Q9HC52 389 aa11.9□□□□□ -0.51
TMF1-203ENST00000488010 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.51
TMF1-203ENST00000488010 MAP3K5Q99683 1374 aa11.89□□□□□ -0.51
TMF1-203ENST00000488010 KCNQ3O43525 872 aa11.89□□□□□ -0.51
TMF1-203ENST00000488010 CREB3L3Q68CJ9 461 aa11.89□□□□□ -0.51
TMF1-203ENST00000488010 CCDC8Q9H0W5 538 aaPredicted RBP11.89□□□□□ -0.51
TMF1-203ENST00000488010 CYB5RLQ6IPT4 315 aa11.89□□□□□ -0.51
TMF1-203ENST00000488010 CCDC171Q6TFL3 1326 aa11.89□□□□□ -0.51
TMF1-203ENST00000488010 NMIQ13287 307 aaPredicted RBP11.88□□□□□ -0.51
TMF1-203ENST00000488010 NAA30Q147X3 362 aaPredicted RBP11.88□□□□□ -0.51
TMF1-203ENST00000488010 SIL1Q9H173 461 aa11.88□□□□□ -0.51
TMF1-203ENST00000488010 DNAJC25Q9H1X3 360 aa11.88□□□□□ -0.51
TMF1-203ENST00000488010 SETD1AO15047 1707 aaKnown RBP11.88□□□□□ -0.51
TMF1-203ENST00000488010 AKAP12Q02952 1782 aa11.88□□□□□ -0.51
TMF1-203ENST00000488010 TNNT1P13805 278 aa11.88□□□□□ -0.51
TMF1-203ENST00000488010 TPD52L1Q16890 204 aaPredicted RBP11.88□□□□□ -0.51
TMF1-203ENST00000488010 BEND3Q5T5X7 828 aa11.88□□□□□ -0.51
TMF1-203ENST00000488010 LARP1Q6PKG0 1096 aaKnown RBP11.88□□□□□ -0.51
TMF1-203ENST00000488010 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
TMF1-203ENST00000488010 USP31Q70CQ4 1352 aa11.88□□□□□ -0.51
TMF1-203ENST00000488010 HTATSF1O43719 755 aaKnown RBP11.88□□□□□ -0.51
TMF1-203ENST00000488010 BLOC1S2Q6QNY1 142 aa11.88□□□□□ -0.51
TMF1-203ENST00000488010 FSD1Q9BTV5 496 aa11.88□□□□□ -0.51
TMF1-203ENST00000488010 LGR6Q9HBX8 967 aa11.88□□□□□ -0.51
TMF1-203ENST00000488010 KDRP35968 1356 aa11.88□□□□□ -0.51
TMF1-203ENST00000488010 NRXN3Q9Y4C0 1643 aa11.87□□□□□ -0.51
TMF1-203ENST00000488010 FBXW7Q969H0 707 aa11.87□□□□□ -0.51
TMF1-203ENST00000488010 DDX11Q96FC9 970 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms