RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 BRIP1Q9BX63 1249 aa14.82□□□□□ -0.04
RAB11FIP3-210ENST00000487899 PNNQ9H307 717 aaKnown RBP14.82□□□□□ -0.04
RAB11FIP3-210ENST00000487899 NFKBIEO00221 500 aa14.81□□□□□ -0.04
RAB11FIP3-210ENST00000487899 TMPOP42166 694 aaKnown RBP14.81□□□□□ -0.04
RAB11FIP3-210ENST00000487899 CLEC4GQ6UXB4 293 aa14.81□□□□□ -0.04
RAB11FIP3-210ENST00000487899 SETDB2Q96T68 719 aa14.81□□□□□ -0.04
RAB11FIP3-210ENST00000487899 ABCC12Q96J65 1359 aa14.81□□□□□ -0.04
RAB11FIP3-210ENST00000487899 RIC1Q4ADV7 1423 aa14.81□□□□□ -0.04
RAB11FIP3-210ENST00000487899 H0YIN7 160 aa14.8□□□□□ -0.04
RAB11FIP3-210ENST00000487899 NPM2Q86SE8 214 aaKnown RBP14.8□□□□□ -0.04
RAB11FIP3-210ENST00000487899 CCDC146Q8IYE0 955 aa14.8□□□□□ -0.04
RAB11FIP3-210ENST00000487899 TTLL6Q8N841 843 aa14.8□□□□□ -0.04
RAB11FIP3-210ENST00000487899 PRKRIP1Q9H875 184 aaPredicted RBP14.8□□□□□ -0.04
RAB11FIP3-210ENST00000487899 RNF181Q9P0P0 153 aa14.8□□□□□ -0.04
RAB11FIP3-210ENST00000487899 ZNF652Q9Y2D9 606 aa14.8□□□□□ -0.04
RAB11FIP3-210ENST00000487899 PDE6BP35913 854 aa14.79□□□□□ -0.04
RAB11FIP3-210ENST00000487899 RIPK4P57078 832 aa14.79□□□□□ -0.04
RAB11FIP3-210ENST00000487899 HLFQ16534 295 aa14.79□□□□□ -0.04
RAB11FIP3-210ENST00000487899 SNED1Q8TER0 1413 aa14.79□□□□□ -0.04
RAB11FIP3-210ENST00000487899 NMRK2Q9NPI5 230 aa14.79□□□□□ -0.04
RAB11FIP3-210ENST00000487899 IBTKQ9P2D0 1353 aaPredicted RBP14.79□□□□□ -0.04
RAB11FIP3-210ENST00000487899 ZC3H4Q9UPT8 1303 aaKnown RBP14.79□□□□□ -0.04
RAB11FIP3-210ENST00000487899 TAF1P21675 1872 aa14.78□□□□□ -0.04
RAB11FIP3-210ENST00000487899 ERBB4Q15303 1308 aa14.78□□□□□ -0.04
RAB11FIP3-210ENST00000487899 UBN2Q6ZU65 1347 aa14.78□□□□□ -0.04
RAB11FIP3-210ENST00000487899 HSPA6P17066 643 aa14.78□□□□□ -0.04
RAB11FIP3-210ENST00000487899 ST5P78524 1137 aa14.78□□□□□ -0.04
RAB11FIP3-210ENST00000487899 LRP10Q7Z4F1 713 aa14.78□□□□□ -0.04
RAB11FIP3-210ENST00000487899 TSPYL4Q9UJ04 414 aa14.78□□□□□ -0.04
RAB11FIP3-210ENST00000487899 PDZRN3Q9UPQ7 1066 aa14.78□□□□□ -0.04
RAB11FIP3-210ENST00000487899 NIP7Q9Y221 180 aaKnown RBP eCLIP14.78□□□□□ -0.04
RAB11FIP3-210ENST00000487899 RRP7AQ9Y3A4 280 aaKnown RBP14.78□□□□□ -0.04
RAB11FIP3-210ENST00000487899 MAP3K15Q6ZN16 1313 aa14.77□□□□□ -0.04
RAB11FIP3-210ENST00000487899 SRGNP10124 158 aa14.77□□□□□ -0.05
RAB11FIP3-210ENST00000487899 TTLL7Q6ZT98 887 aa14.77□□□□□ -0.05
RAB11FIP3-210ENST00000487899 NBPF5PQ86XG9 351 aaPredicted RBP14.77□□□□□ -0.05
RAB11FIP3-210ENST00000487899 TRIM35Q9UPQ4 493 aa14.77□□□□□ -0.05
RAB11FIP3-210ENST00000487899 LRRC37AA6NMS7 1700 aa14.77□□□□□ -0.05
RAB11FIP3-210ENST00000487899 SCN4AP35499 1836 aa14.76□□□□□ -0.05
RAB11FIP3-210ENST00000487899 LMOD3Q0VAK6 560 aa14.76□□□□□ -0.05
RAB11FIP3-210ENST00000487899 STYK1Q6J9G0 422 aa14.76□□□□□ -0.05
RAB11FIP3-210ENST00000487899 PRPF40BQ6NWY9 871 aaKnown RBP14.76□□□□□ -0.05
RAB11FIP3-210ENST00000487899 PCNTO95613 3336 aa14.75□□□□□ -0.05
RAB11FIP3-210ENST00000487899 LTBP3Q9NS15 1303 aa14.75□□□□□ -0.05
RAB11FIP3-210ENST00000487899 KLRG2A4D1S0 409 aaPredicted RBP14.75□□□□□ -0.05
RAB11FIP3-210ENST00000487899 MYL6BP14649 208 aa14.75□□□□□ -0.05
RAB11FIP3-210ENST00000487899 LMNB1P20700 586 aa14.75□□□□□ -0.05
RAB11FIP3-210ENST00000487899 PDIA6Q15084 440 aa14.75□□□□□ -0.05
RAB11FIP3-210ENST00000487899 PROSER3Q2NL68 480 aa14.75□□□□□ -0.05
RAB11FIP3-210ENST00000487899 ZNF622Q969S3 477 aaKnown RBP eCLIP14.75□□□□□ -0.05
RAB11FIP3-210ENST00000487899 RUNDC1Q96C34 613 aa14.75□□□□□ -0.05
RAB11FIP3-210ENST00000487899 BABAM1Q9NWV8 329 aa14.75□□□□□ -0.05
RAB11FIP3-210ENST00000487899 ADAMTS8Q9UP79 889 aa14.75□□□□□ -0.05
RAB11FIP3-210ENST00000487899 ERVV-1B6SEH8 477 aa14.74□□□□□ -0.05
RAB11FIP3-210ENST00000487899 NPHP1O15259 732 aa14.74□□□□□ -0.05
RAB11FIP3-210ENST00000487899 C21orf2O43822 256 aa14.74□□□□□ -0.05
RAB11FIP3-210ENST00000487899 WDR43Q15061 677 aaKnown RBP eCLIP14.74□□□□□ -0.05
RAB11FIP3-210ENST00000487899 ZBTB3Q9H5J0 574 aa14.74□□□□□ -0.05
RAB11FIP3-210ENST00000487899 COL4A5P29400 1685 aa14.74□□□□□ -0.05
RAB11FIP3-210ENST00000487899 ADAMTSL1Q8N6G6 1762 aa14.73□□□□□ -0.05
RAB11FIP3-210ENST00000487899 KRT24Q2M2I5 525 aa14.73□□□□□ -0.05
RAB11FIP3-210ENST00000487899 NGEFQ8N5V2 710 aa14.73□□□□□ -0.05
RAB11FIP3-210ENST00000487899 MASTLQ96GX5 879 aa14.73□□□□□ -0.05
RAB11FIP3-210ENST00000487899 ZNF219Q9P2Y4 722 aaPredicted RBP14.73□□□□□ -0.05
RAB11FIP3-210ENST00000487899 KDM2BQ8NHM5 1336 aa14.72□□□□□ -0.05
RAB11FIP3-210ENST00000487899 FAM177BA6PVY3 158 aa14.72□□□□□ -0.05
RAB11FIP3-210ENST00000487899 ANXA1P04083 346 aa14.72□□□□□ -0.05
RAB11FIP3-210ENST00000487899 NEUROD2Q15784 382 aa14.72□□□□□ -0.05
RAB11FIP3-210ENST00000487899 KIF6Q6ZMV9 814 aa14.72□□□□□ -0.05
RAB11FIP3-210ENST00000487899 CNKSR1Q969H4 720 aa14.72□□□□□ -0.05
RAB11FIP3-210ENST00000487899 LTBP1Q14766 1721 aa14.72□□□□□ -0.05
RAB11FIP3-210ENST00000487899 COL4A1P02462 1669 aa14.71□□□□□ -0.05
RAB11FIP3-210ENST00000487899 CHL1O00533 1208 aa14.71□□□□□ -0.05
RAB11FIP3-210ENST00000487899 TOMM70O94826 608 aa14.71□□□□□ -0.05
RAB11FIP3-210ENST00000487899 NTSR2O95665 410 aa14.71□□□□□ -0.05
RAB11FIP3-210ENST00000487899 NPR1P16066 1061 aa14.71□□□□□ -0.05
RAB11FIP3-210ENST00000487899 GPTP24298 496 aa14.71□□□□□ -0.05
RAB11FIP3-210ENST00000487899 CRY2Q49AN0 593 aa14.71□□□□□ -0.05
RAB11FIP3-210ENST00000487899 TPTE2Q6XPS3 522 aa14.71□□□□□ -0.05
RAB11FIP3-210ENST00000487899 NUTM1Q86Y26 1132 aa14.71□□□□□ -0.05
RAB11FIP3-210ENST00000487899 C7orf43Q8WVR3 580 aa14.71□□□□□ -0.05
RAB11FIP3-210ENST00000487899 GIGYF2Q6Y7W6 1299 aaKnown RBP14.7□□□□□ -0.06
RAB11FIP3-210ENST00000487899 ZNF34Q8IZ26 560 aa14.7□□□□□ -0.06
RAB11FIP3-210ENST00000487899 TAOK3Q9H2K8 898 aa14.7□□□□□ -0.06
RAB11FIP3-210ENST00000487899 MYH3P11055 1940 aa14.7□□□□□ -0.06
RAB11FIP3-210ENST00000487899 DUOX1Q9NRD9 1551 aa14.69□□□□□ -0.06
RAB11FIP3-210ENST00000487899 ERFEQ4G0M1 354 aa14.69□□□□□ -0.06
RAB11FIP3-210ENST00000487899 OLFM4Q6UX06 510 aa14.69□□□□□ -0.06
RAB11FIP3-210ENST00000487899 NYXQ9GZU5 481 aa14.69□□□□□ -0.06
RAB11FIP3-210ENST00000487899 SPEF2Q9C093 1822 aa14.69□□□□□ -0.06
RAB11FIP3-210ENST00000487899 CACNA1FO60840 1977 aa14.68□□□□□ -0.06
RAB11FIP3-210ENST00000487899 GLTPD2A6NH11 291 aa14.68□□□□□ -0.06
RAB11FIP3-210ENST00000487899 EIF2S2P20042 333 aaKnown RBP14.68□□□□□ -0.06
RAB11FIP3-210ENST00000487899 SUSD4Q5VX71 490 aa14.68□□□□□ -0.06
RAB11FIP3-210ENST00000487899 C3orf67Q6ZVT6 689 aa14.68□□□□□ -0.06
RAB11FIP3-210ENST00000487899 SLC51AQ86UW1 340 aa14.68□□□□□ -0.06
RAB11FIP3-210ENST00000487899 RBM46Q8TBY0 533 aaKnown RBP14.68□□□□□ -0.06
RAB11FIP3-210ENST00000487899 CCDC184Q52MB2 194 aa14.67□□□□□ -0.06
RAB11FIP3-210ENST00000487899 CCDC93Q567U6 631 aa14.67□□□□□ -0.06
RAB11FIP3-210ENST00000487899 SOGA3Q5TF21 947 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms