RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PCBP4P57723 403 aaKnown RBP9.64□□□□□ -0.87
SMC4-219ENST00000487747 SAMD5Q5TGI4 173 aa9.64□□□□□ -0.87
SMC4-219ENST00000487747 LARGE2Q8N3Y3 721 aa9.64□□□□□ -0.87
SMC4-219ENST00000487747 MAFBQ9Y5Q3 323 aaPredicted RBP9.64□□□□□ -0.87
SMC4-219ENST00000487747 PALM3A6NDB9 673 aaPredicted RBP9.63□□□□□ -0.87
SMC4-219ENST00000487747 C21orf2O43822 256 aa9.63□□□□□ -0.87
SMC4-219ENST00000487747 SIX5Q8N196 739 aa9.63□□□□□ -0.87
SMC4-219ENST00000487747 MKL2Q9ULH7 1088 aa9.63□□□□□ -0.87
SMC4-219ENST00000487747 HCN4Q9Y3Q4 1203 aa9.63□□□□□ -0.87
SMC4-219ENST00000487747 KRBA1A5PL33 1030 aa9.62□□□□□ -0.87
SMC4-219ENST00000487747 MARK1Q9P0L2 795 aa9.62□□□□□ -0.87
SMC4-219ENST00000487747 LGR5O75473 907 aa9.61□□□□□ -0.87
SMC4-219ENST00000487747 RASA1P20936 1047 aa9.61□□□□□ -0.87
SMC4-219ENST00000487747 ADH6P28332 368 aa9.61□□□□□ -0.87
SMC4-219ENST00000487747 SFSWAPQ12872 951 aaKnown RBP9.61□□□□□ -0.87
SMC4-219ENST00000487747 IGHA1P01876 353 aa9.6□□□□□ -0.87
SMC4-219ENST00000487747 DGKGP49619 791 aa9.6□□□□□ -0.87
SMC4-219ENST00000487747 PSMA6P60900 246 aaKnown RBP9.6□□□□□ -0.87
SMC4-219ENST00000487747 ZNF468Q5VIY5 522 aaPredicted RBP9.6□□□□□ -0.87
SMC4-219ENST00000487747 POTEAQ6S8J7 498 aa9.6□□□□□ -0.87
SMC4-219ENST00000487747 GAS2L2Q8NHY3 880 aa9.6□□□□□ -0.87
SMC4-219ENST00000487747 HSH2DQ96JZ2 352 aa9.6□□□□□ -0.87
SMC4-219ENST00000487747 M0R2N6 131 aa9.59□□□□□ -0.87
SMC4-219ENST00000487747 PROCP04070 461 aa9.59□□□□□ -0.87
SMC4-219ENST00000487747 CHSY3Q70JA7 882 aa9.59□□□□□ -0.87
SMC4-219ENST00000487747 ZNF280CQ8ND82 737 aa9.59□□□□□ -0.87
SMC4-219ENST00000487747 RHPN1Q8TCX5 695 aa9.59□□□□□ -0.87
SMC4-219ENST00000487747 SPOCK3Q9BQ16 436 aa9.59□□□□□ -0.87
SMC4-219ENST00000487747 PHACTR1Q9C0D0 580 aa9.59□□□□□ -0.87
SMC4-219ENST00000487747 PRR12Q9ULL5 1215 aa9.59□□□□□ -0.87
SMC4-219ENST00000487747 CRTC2Q53ET0 693 aaPredicted RBP9.58□□□□□ -0.88
SMC4-219ENST00000487747 CALR3Q96L12 384 aaKnown RBP9.58□□□□□ -0.88
SMC4-219ENST00000487747 SLC30A3Q99726 388 aa9.58□□□□□ -0.88
SMC4-219ENST00000487747 PPP1R12CQ9BZL4 782 aa9.58□□□□□ -0.88
SMC4-219ENST00000487747 A6NJR5 290 aa9.57□□□□□ -0.88
SMC4-219ENST00000487747 MSTNO14793 375 aa9.57□□□□□ -0.88
SMC4-219ENST00000487747 PPP1R12BO60237 982 aaPredicted RBP9.57□□□□□ -0.88
SMC4-219ENST00000487747 HIRAP54198 1017 aaPredicted RBP9.57□□□□□ -0.88
SMC4-219ENST00000487747 LAMC2Q13753 1193 aa9.57□□□□□ -0.88
SMC4-219ENST00000487747 KANK4Q5T7N3 995 aaPredicted RBP9.57□□□□□ -0.88
SMC4-219ENST00000487747 SYT9Q86SS6 491 aa9.57□□□□□ -0.88
SMC4-219ENST00000487747 AVENQ9NQS1 362 aaPredicted RBP9.57□□□□□ -0.88
SMC4-219ENST00000487747 ATAD2Q6PL18 1390 aa9.57□□□□□ -0.88
SMC4-219ENST00000487747 C1orf53Q5VUE5 145 aa9.56□□□□□ -0.88
SMC4-219ENST00000487747 SCG3Q8WXD2 468 aaKnown RBP9.56□□□□□ -0.88
SMC4-219ENST00000487747 NEUROD4Q9HD90 331 aa9.56□□□□□ -0.88
SMC4-219ENST00000487747 SEC13P55735 322 aa9.55□□□□□ -0.88
SMC4-219ENST00000487747 PTK7Q13308 1070 aa9.55□□□□□ -0.88
SMC4-219ENST00000487747 RAB44Q7Z6P3 723 aaPredicted RBP9.55□□□□□ -0.88
SMC4-219ENST00000487747 MDFIQ99750 246 aa9.55□□□□□ -0.88
SMC4-219ENST00000487747 GNB5O14775 395 aa9.54□□□□□ -0.88
SMC4-219ENST00000487747 ALDH16A1Q8IZ83 802 aa9.54□□□□□ -0.88
SMC4-219ENST00000487747 CHMP7Q8WUX9 453 aaPredicted RBP9.54□□□□□ -0.88
SMC4-219ENST00000487747 SUSD3Q96L08 255 aa9.54□□□□□ -0.88
SMC4-219ENST00000487747 C2orf49Q9BVC5 232 aaPredicted RBP9.54□□□□□ -0.88
SMC4-219ENST00000487747 GPC6Q9Y625 555 aaPredicted RBP9.54□□□□□ -0.88
SMC4-219ENST00000487747 LMOD1P29536 600 aaPredicted RBP9.53□□□□□ -0.88
SMC4-219ENST00000487747 DPYDQ12882 1025 aa9.53□□□□□ -0.88
SMC4-219ENST00000487747 XP32Q5T750 250 aa9.53□□□□□ -0.88
SMC4-219ENST00000487747 CEP63Q96MT8 703 aa9.53□□□□□ -0.88
SMC4-219ENST00000487747 BRD7Q9NPI1 651 aa9.53□□□□□ -0.88
SMC4-219ENST00000487747 RBM19Q9Y4C8 960 aaKnown RBP9.53□□□□□ -0.88
SMC4-219ENST00000487747 LARP1Q6PKG0 1096 aaKnown RBP9.52□□□□□ -0.89
SMC4-219ENST00000487747 TRIM11Q96F44 468 aa9.52□□□□□ -0.89
SMC4-219ENST00000487747 NGLY1Q96IV0 654 aa9.52□□□□□ -0.89
SMC4-219ENST00000487747 HINFPQ9BQA5 517 aa9.52□□□□□ -0.89
SMC4-219ENST00000487747 CHMP3Q9Y3E7 222 aa9.52□□□□□ -0.89
SMC4-219ENST00000487747 ELOA3CA0A087WX78 387 aaPredicted RBP9.51□□□□□ -0.89
SMC4-219ENST00000487747 ELOA3DA6NLF2 546 aaPredicted RBP9.51□□□□□ -0.89
SMC4-219ENST00000487747 TYRO3Q06418 890 aa9.51□□□□□ -0.89
SMC4-219ENST00000487747 SPEM2Q0P670 501 aa9.51□□□□□ -0.89
SMC4-219ENST00000487747 ELOA3BQ3SY89 546 aa9.51□□□□□ -0.89
SMC4-219ENST00000487747 ELOA3Q8NG57 546 aa9.51□□□□□ -0.89
SMC4-219ENST00000487747 ZNF777Q9ULD5 760 aaPredicted RBP9.51□□□□□ -0.89
SMC4-219ENST00000487747 USP17L15C9J2P7 530 aa9.5□□□□□ -0.89
SMC4-219ENST00000487747 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
SMC4-219ENST00000487747 USP17L13C9JLJ4 530 aa9.5□□□□□ -0.89
SMC4-219ENST00000487747 USP17L12C9JPN9 530 aa9.5□□□□□ -0.89
SMC4-219ENST00000487747 USP17L11C9JVI0 530 aa9.5□□□□□ -0.89
SMC4-219ENST00000487747 USP17L21D6R901 530 aa9.5□□□□□ -0.89
SMC4-219ENST00000487747 USP17L18D6R9N7 530 aa9.5□□□□□ -0.89
SMC4-219ENST00000487747 USP17L22D6RA61 530 aa9.5□□□□□ -0.89
SMC4-219ENST00000487747 USP17L17D6RBQ6 530 aa9.5□□□□□ -0.89
SMC4-219ENST00000487747 USP17L19D6RCP7 530 aa9.5□□□□□ -0.89
SMC4-219ENST00000487747 USP17L20D6RJB6 530 aa9.5□□□□□ -0.89
SMC4-219ENST00000487747 USP17L24Q0WX57 530 aa9.5□□□□□ -0.89
SMC4-219ENST00000487747 SIN3BO75182 1162 aa9.49□□□□□ -0.89
SMC4-219ENST00000487747 CFAP70Q5T0N1 1121 aa9.49□□□□□ -0.89
SMC4-219ENST00000487747 ANKMY2Q8IV38 441 aa9.49□□□□□ -0.89
SMC4-219ENST00000487747 STAG2Q8N3U4 1231 aa9.49□□□□□ -0.89
SMC4-219ENST00000487747 ARXQ96QS3 562 aa9.49□□□□□ -0.89
SMC4-219ENST00000487747 VRTNQ9H8Y1 702 aa9.49□□□□□ -0.89
SMC4-219ENST00000487747 ANKIB1Q9P2G1 1089 aa9.49□□□□□ -0.89
SMC4-219ENST00000487747 STARD13Q9Y3M8 1113 aa9.49□□□□□ -0.89
SMC4-219ENST00000487747 C1QTNF9BB2RNN3 333 aa9.48□□□□□ -0.89
SMC4-219ENST00000487747 CHRNA4P43681 627 aa9.48□□□□□ -0.89
SMC4-219ENST00000487747 KCNQ4P56696 695 aa9.48□□□□□ -0.89
SMC4-219ENST00000487747 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
SMC4-219ENST00000487747 CD163Q86VB7 1156 aa9.48□□□□□ -0.89
SMC4-219ENST00000487747 PLVAPQ9BX97 442 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms