RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 AIMP1Q12904 312 aaKnown RBP17.84■□□□□ 0.45
CUX1-209ENST00000487284 SLC27A3Q5K4L6 730 aa17.84■□□□□ 0.45
CUX1-209ENST00000487284 XAGE3Q8WTP9 111 aa17.84■□□□□ 0.45
CUX1-209ENST00000487284 COPS6Q7L5N1 327 aa17.83■□□□□ 0.45
CUX1-209ENST00000487284 SMC5Q8IY18 1101 aa17.83■□□□□ 0.45
CUX1-209ENST00000487284 ZNF330Q9Y3S2 320 aaPredicted RBP17.83■□□□□ 0.45
CUX1-209ENST00000487284 CNTNAP4Q9C0A0 1308 aa17.83■□□□□ 0.44
CUX1-209ENST00000487284 IL6STP40189 918 aaPredicted RBP17.82■□□□□ 0.44
CUX1-209ENST00000487284 C1orf115Q9H7X2 142 aa17.82■□□□□ 0.44
CUX1-209ENST00000487284 ARFGEF2Q9Y6D5 1785 aa17.82■□□□□ 0.44
CUX1-209ENST00000487284 ADCY9O60503 1353 aa17.81■□□□□ 0.44
CUX1-209ENST00000487284 EN1Q05925 392 aaPredicted RBP17.81■□□□□ 0.44
CUX1-209ENST00000487284 SF3B2Q13435 895 aaKnown RBP17.81■□□□□ 0.44
CUX1-209ENST00000487284 SLC4A10Q6U841 1118 aa17.81■□□□□ 0.44
CUX1-209ENST00000487284 TTLL7Q6ZT98 887 aa17.81■□□□□ 0.44
CUX1-209ENST00000487284 PDZRN3Q9UPQ7 1066 aa17.81■□□□□ 0.44
CUX1-209ENST00000487284 RBM19Q9Y4C8 960 aaKnown RBP17.81■□□□□ 0.44
CUX1-209ENST00000487284 NUP188Q5SRE5 1749 aa17.81■□□□□ 0.44
CUX1-209ENST00000487284 PI4KAP2A4QPH2 592 aa17.8■□□□□ 0.44
CUX1-209ENST00000487284 EIF5P55010 431 aaKnown RBP17.8■□□□□ 0.44
CUX1-209ENST00000487284 RC3H1Q5TC82 1133 aaKnown RBP17.8■□□□□ 0.44
CUX1-209ENST00000487284 PI4KAP1Q8N8J0 262 aa17.8■□□□□ 0.44
CUX1-209ENST00000487284 MEIS3Q99687 375 aa17.8■□□□□ 0.44
CUX1-209ENST00000487284 UBR3Q6ZT12 1888 aa17.8■□□□□ 0.44
CUX1-209ENST00000487284 DDX58O95786 925 aaKnown RBP17.79■□□□□ 0.44
CUX1-209ENST00000487284 BAG6P46379 1132 aa17.79■□□□□ 0.44
CUX1-209ENST00000487284 EZH2Q15910 746 aaKnown RBP17.79■□□□□ 0.44
CUX1-209ENST00000487284 DEFB132Q7Z7B7 95 aa17.79■□□□□ 0.44
CUX1-209ENST00000487284 SIRT2Q8IXJ6 389 aa17.79■□□□□ 0.44
CUX1-209ENST00000487284 CAMKK2Q96RR4 588 aa17.79■□□□□ 0.44
CUX1-209ENST00000487284 AFDNP55196 1824 aaKnown RBP17.79■□□□□ 0.44
CUX1-209ENST00000487284 GNPATO15228 680 aa17.79■□□□□ 0.44
CUX1-209ENST00000487284 KSR2Q6VAB6 950 aa17.79■□□□□ 0.44
CUX1-209ENST00000487284 COL15A1P39059 1388 aa17.78■□□□□ 0.44
CUX1-209ENST00000487284 SOCS7O14512 581 aa17.78■□□□□ 0.44
CUX1-209ENST00000487284 RGS3P49796 1198 aa17.78■□□□□ 0.44
CUX1-209ENST00000487284 ANKRD13DQ6ZTN6 518 aa17.78■□□□□ 0.44
CUX1-209ENST00000487284 DNAAF4Q8WXU2 420 aa17.78■□□□□ 0.44
CUX1-209ENST00000487284 MAP3K2Q9Y2U5 619 aa17.78■□□□□ 0.44
CUX1-209ENST00000487284 RPS6KA4O75676 772 aa17.77■□□□□ 0.44
CUX1-209ENST00000487284 SMIM5Q71RC9 77 aa17.77■□□□□ 0.44
CUX1-209ENST00000487284 RIC3Q7Z5B4 369 aa17.77■□□□□ 0.44
CUX1-209ENST00000487284 NPM2Q86SE8 214 aaKnown RBP17.77■□□□□ 0.44
CUX1-209ENST00000487284 AMIGO3Q86WK7 504 aa17.77■□□□□ 0.44
CUX1-209ENST00000487284 RPAP2Q8IXW5 612 aaPredicted RBP17.77■□□□□ 0.44
CUX1-209ENST00000487284 ANKRD44Q8N8A2 993 aa17.77■□□□□ 0.44
CUX1-209ENST00000487284 AK7Q96M32 723 aa17.77■□□□□ 0.44
CUX1-209ENST00000487284 ARXQ96QS3 562 aa17.77■□□□□ 0.44
CUX1-209ENST00000487284 C4AP0C0L4 1744 aa17.76■□□□□ 0.43
CUX1-209ENST00000487284 CCDC125Q86Z20 511 aa17.76■□□□□ 0.43
CUX1-209ENST00000487284 GCC1Q96CN9 775 aa17.76■□□□□ 0.43
CUX1-209ENST00000487284 ZBTB3Q9H5J0 574 aa17.76■□□□□ 0.43
CUX1-209ENST00000487284 TUBGCP6Q96RT7 1819 aa17.76■□□□□ 0.43
CUX1-209ENST00000487284 GNAI3P08754 354 aa17.75■□□□□ 0.43
CUX1-209ENST00000487284 CEP85Q6P2H3 762 aa17.75■□□□□ 0.43
CUX1-209ENST00000487284 BCORQ6W2J9 1755 aa17.75■□□□□ 0.43
CUX1-209ENST00000487284 KIF6Q6ZMV9 814 aa17.75■□□□□ 0.43
CUX1-209ENST00000487284 DZIP3Q86Y13 1208 aaKnown RBP17.75■□□□□ 0.43
CUX1-209ENST00000487284 PLBD2Q8NHP8 589 aa17.75■□□□□ 0.43
CUX1-209ENST00000487284 TBC1D2BQ9UPU7 963 aa17.75■□□□□ 0.43
CUX1-209ENST00000487284 RTCBQ9Y3I0 505 aaKnown RBP17.75■□□□□ 0.43
CUX1-209ENST00000487284 NUP98P52948 1817 aa17.75■□□□□ 0.43
CUX1-209ENST00000487284 PDE4AP27815 886 aa17.74■□□□□ 0.43
CUX1-209ENST00000487284 ZNF827Q17R98 1081 aa17.74■□□□□ 0.43
CUX1-209ENST00000487284 BACH2Q9BYV9 841 aa17.74■□□□□ 0.43
CUX1-209ENST00000487284 MAP3K15Q6ZN16 1313 aa17.74■□□□□ 0.43
CUX1-209ENST00000487284 NUCB1Q02818 461 aa17.74■□□□□ 0.43
CUX1-209ENST00000487284 BEND3Q5T5X7 828 aa17.74■□□□□ 0.43
CUX1-209ENST00000487284 SRCIN1Q9C0H9 1055 aa17.74■□□□□ 0.43
CUX1-209ENST00000487284 SCN7AQ01118 1682 aa17.73■□□□□ 0.43
CUX1-209ENST00000487284 IBTKQ9P2D0 1353 aaPredicted RBP17.73■□□□□ 0.43
CUX1-209ENST00000487284 ANKRD36CQ5JPF3 1778 aa17.73■□□□□ 0.43
CUX1-209ENST00000487284 PHF14O94880 888 aa17.73■□□□□ 0.43
CUX1-209ENST00000487284 GNAI2P04899 355 aa17.73■□□□□ 0.43
CUX1-209ENST00000487284 HMGB2P26583 209 aaKnown RBP17.73■□□□□ 0.43
CUX1-209ENST00000487284 UPF1Q92900 1129 aaKnown RBP eCLIP17.73■□□□□ 0.43
CUX1-209ENST00000487284 METTL22Q9BUU2 404 aaPredicted RBP17.73■□□□□ 0.43
CUX1-209ENST00000487284 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
CUX1-209ENST00000487284 MYD88Q99836 296 aa17.72■□□□□ 0.43
CUX1-209ENST00000487284 USP44Q9H0E7 712 aa17.72■□□□□ 0.43
CUX1-209ENST00000487284 A0A087WZG4 1122 aa17.71■□□□□ 0.43
CUX1-209ENST00000487284 CAMTA2O94983 1202 aa17.71■□□□□ 0.43
CUX1-209ENST00000487284 HLFQ16534 295 aa17.71■□□□□ 0.43
CUX1-209ENST00000487284 CWF19L2Q2TBE0 894 aaKnown RBP17.71■□□□□ 0.43
CUX1-209ENST00000487284 DCTPP1Q9H773 170 aa17.71■□□□□ 0.43
CUX1-209ENST00000487284 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
CUX1-209ENST00000487284 ALDH1L1O75891 902 aa17.7■□□□□ 0.42
CUX1-209ENST00000487284 IGKV5-2P06315 115 aa17.7■□□□□ 0.42
CUX1-209ENST00000487284 NEXNQ0ZGT2 675 aa17.7■□□□□ 0.42
CUX1-209ENST00000487284 ARHGEF1Q92888 912 aaKnown RBP17.7■□□□□ 0.42
CUX1-209ENST00000487284 ANO8Q9HCE9 1232 aaPredicted RBP17.7■□□□□ 0.42
CUX1-209ENST00000487284 ERVV-1B6SEH8 477 aa17.7■□□□□ 0.42
CUX1-209ENST00000487284 ATP5J2-PTCD1G3V325 749 aa17.7■□□□□ 0.42
CUX1-209ENST00000487284 SSFA2P28290 1259 aa17.7■□□□□ 0.42
CUX1-209ENST00000487284 FAM161AQ3B820 660 aa17.7■□□□□ 0.42
CUX1-209ENST00000487284 TRAPPC3LQ5T215 181 aa17.7■□□□□ 0.42
CUX1-209ENST00000487284 GIGYF2Q6Y7W6 1299 aaKnown RBP17.7■□□□□ 0.42
CUX1-209ENST00000487284 CHD1LQ86WJ1 897 aa17.7■□□□□ 0.42
CUX1-209ENST00000487284 LINS1Q8NG48 757 aa17.7■□□□□ 0.42
CUX1-209ENST00000487284 TFCP2L1Q9NZI6 479 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms